RNA–Protein interactions for RNA: ENST00000390457.2

TRAV27-201, Transcript of T cell receptor alpha variable 27, humanhuman

APPRIS P1 BASIC

Gene TRAV27, Length 425 nt, Biotype TR V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27-201ENST00000390457 EI24O14681 340 aa5.36□□□□□ -1.55
TRAV27-201ENST00000390457 ARPC1BO15143 372 aaKnown RBP5.36□□□□□ -1.55
TRAV27-201ENST00000390457 OGG1O15527 345 aa5.36□□□□□ -1.55
TRAV27-201ENST00000390457 FADS2O95864 444 aaKnown RBP5.36□□□□□ -1.55
TRAV27-201ENST00000390457 LALBAP00709 142 aa5.36□□□□□ -1.55
TRAV27-201ENST00000390457 GLAP06280 429 aa5.36□□□□□ -1.55
TRAV27-201ENST00000390457 CD2P06729 351 aa5.36□□□□□ -1.55
TRAV27-201ENST00000390457 GTF2F2P13984 249 aa5.36□□□□□ -1.55
TRAV27-201ENST00000390457 BDKRB2P30411 391 aa5.36□□□□□ -1.55
TRAV27-201ENST00000390457 CHRNA7P36544 502 aa5.36□□□□□ -1.55
TRAV27-201ENST00000390457 PPP1CCP36873 323 aaKnown RBP5.36□□□□□ -1.55
TRAV27-201ENST00000390457 OR3A3P47888 321 aa5.36□□□□□ -1.55
TRAV27-201ENST00000390457 RPS11P62280 158 aaKnown RBP eCLIP5.36□□□□□ -1.55
TRAV27-201ENST00000390457 HTD2P86397 168 aa5.36□□□□□ -1.55
TRAV27-201ENST00000390457 RAB40BQ12829 278 aa5.36□□□□□ -1.55
TRAV27-201ENST00000390457 SRSF7Q16629 238 aaKnown RBP eCLIP5.36□□□□□ -1.55
TRAV27-201ENST00000390457 HAGHQ16775 308 aa5.36□□□□□ -1.55
TRAV27-201ENST00000390457 LRRC36Q1X8D7 754 aa5.36□□□□□ -1.55
TRAV27-201ENST00000390457 SLC22A6Q4U2R8 563 aa5.36□□□□□ -1.55
TRAV27-201ENST00000390457 CCDC58Q4VC31 144 aa5.36□□□□□ -1.55
TRAV27-201ENST00000390457 AKIRIN2Q53H80 203 aa5.36□□□□□ -1.55
TRAV27-201ENST00000390457 C6orf141Q5SZD1 244 aa5.36□□□□□ -1.55
TRAV27-201ENST00000390457 DDI2Q5TDH0 399 aa5.36□□□□□ -1.55
TRAV27-201ENST00000390457 RPL22L1Q6P5R6 122 aaKnown RBP5.36□□□□□ -1.55
TRAV27-201ENST00000390457 TRAT1Q6PIZ9 186 aa5.36□□□□□ -1.55
TRAV27-201ENST00000390457 LINC00322Q6ZN03 302 aaPredicted RBP5.36□□□□□ -1.55
TRAV27-201ENST00000390457 HAPLN4Q86UW8 402 aa5.36□□□□□ -1.55
TRAV27-201ENST00000390457 STX19Q8N4C7 294 aa5.36□□□□□ -1.55
TRAV27-201ENST00000390457 TCTEX1D1Q8N7M0 179 aa5.36□□□□□ -1.55
TRAV27-201ENST00000390457 OR52L2PQ8NGH6 319 aa5.36□□□□□ -1.55
TRAV27-201ENST00000390457 CASTOR1Q8WTX7 329 aa5.36□□□□□ -1.55
TRAV27-201ENST00000390457 APH1BQ8WW43 257 aa5.36□□□□□ -1.55
TRAV27-201ENST00000390457 MRPS24Q96EL2 167 aaKnown RBP5.36□□□□□ -1.55
TRAV27-201ENST00000390457 RDH12Q96NR8 316 aa5.36□□□□□ -1.55
TRAV27-201ENST00000390457 OR14A2Q96R54 314 aa5.36□□□□□ -1.55
TRAV27-201ENST00000390457 ZNF184Q99676 751 aaPredicted RBP5.36□□□□□ -1.55
TRAV27-201ENST00000390457 ABHD14AQ9BUJ0 271 aa5.36□□□□□ -1.55
TRAV27-201ENST00000390457 CST11Q9H112 138 aa5.36□□□□□ -1.55
TRAV27-201ENST00000390457 IFI27L2Q9H2X8 130 aa5.36□□□□□ -1.55
TRAV27-201ENST00000390457 GHITMQ9H3K2 345 aa5.36□□□□□ -1.55
TRAV27-201ENST00000390457 TAF9BQ9HBM6 251 aa5.36□□□□□ -1.55
TRAV27-201ENST00000390457 RAB9BQ9NP90 201 aa5.36□□□□□ -1.55
TRAV27-201ENST00000390457 FGF20Q9NP95 211 aaPredicted RBP5.36□□□□□ -1.55
TRAV27-201ENST00000390457 OR2S2Q9NQN1 319 aa5.36□□□□□ -1.55
TRAV27-201ENST00000390457 ETAA1Q9NY74 926 aa5.36□□□□□ -1.55
TRAV27-201ENST00000390457 JPT1Q9UK76 154 aa5.36□□□□□ -1.55
TRAV27-201ENST00000390457 GAB2Q9UQC2 676 aa5.36□□□□□ -1.55
TRAV27-201ENST00000390457 DNAH6Q9C0G6 4158 aa5.36□□□□□ -1.55
TRAV27-201ENST00000390457 KIAA1109Q2LD37 5005 aa5.36□□□□□ -1.55
TRAV27-201ENST00000390457 TRAV8-7A0A075B6U6 113 aa5.35□□□□□ -1.55
TRAV27-201ENST00000390457 SAA2-SAA4A0A096LPE2 208 aa5.35□□□□□ -1.55
TRAV27-201ENST00000390457 TRBV5-7A0A0A0MS05 114 aa5.35□□□□□ -1.55
TRAV27-201ENST00000390457 FAM90A7PA6NKC0 464 aa5.35□□□□□ -1.55
TRAV27-201ENST00000390457 FAM90A23PA8MXZ1 464 aa5.35□□□□□ -1.55
TRAV27-201ENST00000390457 RRHO14718 337 aa5.35□□□□□ -1.55
TRAV27-201ENST00000390457 PROP1O75360 226 aa5.35□□□□□ -1.55
TRAV27-201ENST00000390457 IGHV3-11P01762 117 aa5.35□□□□□ -1.55
TRAV27-201ENST00000390457 SAA2P0DJI9 122 aaPredicted RBP5.35□□□□□ -1.55
TRAV27-201ENST00000390457 CT45A6P0DMU7 189 aa5.35□□□□□ -1.55
TRAV27-201ENST00000390457 CT45A5P0DMU8 189 aa5.35□□□□□ -1.55
TRAV27-201ENST00000390457 CT45A7P0DMV0 189 aa5.35□□□□□ -1.55
TRAV27-201ENST00000390457 FUT3P21217 361 aa5.35□□□□□ -1.55
TRAV27-201ENST00000390457 MECP2P51608 486 aaKnown RBP5.35□□□□□ -1.55
TRAV27-201ENST00000390457 ALDH3A2P51648 485 aa5.35□□□□□ -1.55
TRAV27-201ENST00000390457 SSBP2P81877 361 aaPredicted RBP5.35□□□□□ -1.55
TRAV27-201ENST00000390457 PITPNAQ00169 270 aa5.35□□□□□ -1.55
TRAV27-201ENST00000390457 KLF5Q13887 457 aaPredicted RBP5.35□□□□□ -1.55
TRAV27-201ENST00000390457 GPR176Q14439 515 aa5.35□□□□□ -1.55
TRAV27-201ENST00000390457 ECSCRQ19T08 205 aa5.35□□□□□ -1.55
TRAV27-201ENST00000390457 ZIK1Q3SY52 487 aaPredicted RBP5.35□□□□□ -1.55
TRAV27-201ENST00000390457 RAB12Q6IQ22 244 aa5.35□□□□□ -1.55
TRAV27-201ENST00000390457 PYHIN1Q6K0P9 492 aa5.35□□□□□ -1.55
TRAV27-201ENST00000390457 FAM71F2Q6NXP2 309 aa5.35□□□□□ -1.55
TRAV27-201ENST00000390457 PRR18Q8N4B5 295 aa5.35□□□□□ -1.55
TRAV27-201ENST00000390457 ZNF485Q8NCK3 441 aa5.35□□□□□ -1.55
TRAV27-201ENST00000390457 ZBTB34Q8NCN2 500 aa5.35□□□□□ -1.55
TRAV27-201ENST00000390457 OR5AN1Q8NGI8 311 aa5.35□□□□□ -1.55
TRAV27-201ENST00000390457 OR13C5Q8NGS8 318 aa5.35□□□□□ -1.55
TRAV27-201ENST00000390457 MRPL30Q8TCC3 161 aaKnown RBP5.35□□□□□ -1.55
TRAV27-201ENST00000390457 NEK7Q8TDX7 302 aa5.35□□□□□ -1.55
TRAV27-201ENST00000390457 FLYWCH2Q96CP2 140 aaKnown RBP5.35□□□□□ -1.55
TRAV27-201ENST00000390457 Q96M66 194 aa5.35□□□□□ -1.55
TRAV27-201ENST00000390457 OR4C12Q96R67 309 aa5.35□□□□□ -1.55
TRAV27-201ENST00000390457 SPATA25Q9BR10 227 aa5.35□□□□□ -1.55
TRAV27-201ENST00000390457 FBXL15Q9H469 300 aa5.35□□□□□ -1.55
TRAV27-201ENST00000390457 CNOT2Q9NZN8 540 aaKnown RBP5.35□□□□□ -1.55
TRAV27-201ENST00000390457 KIAA1456Q9P272 454 aa5.35□□□□□ -1.55
TRAV27-201ENST00000390457 STUB1Q9UNE7 303 aa5.35□□□□□ -1.55
TRAV27-201ENST00000390457 PEX16Q9Y5Y5 336 aa5.35□□□□□ -1.55
TRAV27-201ENST00000390457 DNAH17Q9UFH2 4485 aa5.35□□□□□ -1.55
TRAV27-201ENST00000390457 DNAH2Q9P225 4427 aa5.34□□□□□ -1.55
TRAV27-201ENST00000390457 PGPEP1LA6NFU8 196 aa5.34□□□□□ -1.55
TRAV27-201ENST00000390457 H3BNX3 289 aa5.34□□□□□ -1.55
TRAV27-201ENST00000390457 WBP4O75554 376 aaKnown RBP5.34□□□□□ -1.55
TRAV27-201ENST00000390457 MAS1P04201 325 aa5.34□□□□□ -1.55
TRAV27-201ENST00000390457 FSTP19883 344 aa5.34□□□□□ -1.55
TRAV27-201ENST00000390457 ETV1P50549 477 aa5.34□□□□□ -1.55
TRAV27-201ENST00000390457 PPP3R1P63098 170 aa5.34□□□□□ -1.55
TRAV27-201ENST00000390457 TMEM267Q0VDI3 215 aaPredicted RBP5.34□□□□□ -1.55
TRAV27-201ENST00000390457 RIPK1Q13546 671 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms