RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 C1orf53Q5VUE5 145 aa4.28□□□□□ -1.72
PTPRD-203ENST00000381196 ATOH7Q8N100 152 aa4.28□□□□□ -1.72
PTPRD-203ENST00000381196 NMNAT3Q96T66 252 aa4.28□□□□□ -1.72
PTPRD-203ENST00000381196 CGGBP1Q9UFW8 167 aaPredicted RBP4.28□□□□□ -1.72
PTPRD-203ENST00000381196 ST6GALNAC2Q9UJ37 374 aa4.28□□□□□ -1.72
PTPRD-203ENST00000381196 F8P00451 2351 aa4.28□□□□□ -1.72
PTPRD-203ENST00000381196 SPTY2D1-AS1A0A0U1RR47 76 aa4.28□□□□□ -1.72
PTPRD-203ENST00000381196 SHISA9B4DS77 424 aa4.28□□□□□ -1.72
PTPRD-203ENST00000381196 SIVA1O15304 175 aa4.28□□□□□ -1.72
PTPRD-203ENST00000381196 PNPLA1Q8N8W4 532 aa4.28□□□□□ -1.72
PTPRD-203ENST00000381196 OR10AD1Q8NGE0 317 aa4.28□□□□□ -1.72
PTPRD-203ENST00000381196 RCC1LQ96I51 464 aaKnown RBP4.28□□□□□ -1.72
PTPRD-203ENST00000381196 GPA33Q99795 319 aa4.28□□□□□ -1.72
PTPRD-203ENST00000381196 PRDM7Q9NQW5 492 aa4.28□□□□□ -1.72
PTPRD-203ENST00000381196 TMEM140Q9NV12 185 aa4.28□□□□□ -1.72
PTPRD-203ENST00000381196 PLPP1O14494 284 aa4.28□□□□□ -1.72
PTPRD-203ENST00000381196 SMPD2O60906 423 aa4.28□□□□□ -1.72
PTPRD-203ENST00000381196 RHBDL1O75783 438 aa4.28□□□□□ -1.72
PTPRD-203ENST00000381196 SLC2A10O95528 541 aa4.28□□□□□ -1.72
PTPRD-203ENST00000381196 WNT2P09544 360 aa4.28□□□□□ -1.72
PTPRD-203ENST00000381196 ZNF750Q32MQ0 723 aa4.28□□□□□ -1.72
PTPRD-203ENST00000381196 SPATA45Q537H7 98 aa4.28□□□□□ -1.72
PTPRD-203ENST00000381196 TMEM196Q5HYL7 178 aa4.28□□□□□ -1.72
PTPRD-203ENST00000381196 FHL5Q5TD97 284 aa4.28□□□□□ -1.72
PTPRD-203ENST00000381196 ZNF468Q5VIY5 522 aaPredicted RBP4.28□□□□□ -1.72
PTPRD-203ENST00000381196 OR10X1Q8NGY0 326 aa4.28□□□□□ -1.72
PTPRD-203ENST00000381196 PBOV1Q9GZY1 135 aa4.28□□□□□ -1.72
PTPRD-203ENST00000381196 UBTD1Q9HAC8 227 aa4.28□□□□□ -1.72
PTPRD-203ENST00000381196 BOLA1Q9Y3E2 137 aa4.28□□□□□ -1.72
PTPRD-203ENST00000381196 TRAV9-2A0A087WT02 112 aa4.28□□□□□ -1.72
PTPRD-203ENST00000381196 SMIM30A4D0T7 59 aa4.28□□□□□ -1.72
PTPRD-203ENST00000381196 EDN3P14138 238 aa4.28□□□□□ -1.72
PTPRD-203ENST00000381196 GBGT1Q8N5D6 347 aa4.28□□□□□ -1.72
PTPRD-203ENST00000381196 MRPL30Q8TCC3 161 aaKnown RBP4.28□□□□□ -1.72
PTPRD-203ENST00000381196 SECTM1Q8WVN6 248 aa4.28□□□□□ -1.72
PTPRD-203ENST00000381196 TMEM56Q96MV1 263 aa4.28□□□□□ -1.72
PTPRD-203ENST00000381196 SPANXB1Q9NS25 103 aaPredicted RBP4.28□□□□□ -1.72
PTPRD-203ENST00000381196 PIGLQ9Y2B2 252 aa4.28□□□□□ -1.72
PTPRD-203ENST00000381196 TMEM30CPA0ZSE6 113 aa4.28□□□□□ -1.73
PTPRD-203ENST00000381196 TUSC2O75896 110 aa4.28□□□□□ -1.73
PTPRD-203ENST00000381196 GOSR1O95249 250 aa4.28□□□□□ -1.73
PTPRD-203ENST00000381196 HSD52Q0P140 79 aa4.28□□□□□ -1.73
PTPRD-203ENST00000381196 WIPI1Q5MNZ9 446 aaPredicted RBP4.28□□□□□ -1.73
PTPRD-203ENST00000381196 NOXO1Q8NFA2 376 aa4.28□□□□□ -1.73
PTPRD-203ENST00000381196 SPACA9Q96E40 222 aaPredicted RBP4.28□□□□□ -1.73
PTPRD-203ENST00000381196 RARRES2Q99969 163 aa4.28□□□□□ -1.73
PTPRD-203ENST00000381196 GFRA4Q9GZZ7 299 aa4.28□□□□□ -1.73
PTPRD-203ENST00000381196 RAB1BQ9H0U4 201 aa4.28□□□□□ -1.73
PTPRD-203ENST00000381196 FAM221AA4D161 298 aa4.27□□□□□ -1.73
PTPRD-203ENST00000381196 CRXO43186 299 aaPredicted RBP4.27□□□□□ -1.73
PTPRD-203ENST00000381196 OLIG3Q7RTU3 272 aa4.27□□□□□ -1.73
PTPRD-203ENST00000381196 ZNF511Q8NB15 262 aa4.27□□□□□ -1.73
PTPRD-203ENST00000381196 BCL2L2Q92843 193 aaPredicted RBP4.27□□□□□ -1.73
PTPRD-203ENST00000381196 MEGF9Q9H1U4 602 aa4.27□□□□□ -1.73
PTPRD-203ENST00000381196 PRDM13Q9H4Q3 707 aa4.27□□□□□ -1.73
PTPRD-203ENST00000381196 C3orf85A0A1B0GTC6 90 aa4.27□□□□□ -1.73
PTPRD-203ENST00000381196 SOCS6O14544 535 aa4.27□□□□□ -1.73
PTPRD-203ENST00000381196 PPIHO43447 177 aaKnown RBP4.27□□□□□ -1.73
PTPRD-203ENST00000381196 CA1P00915 261 aaPredicted RBP4.27□□□□□ -1.73
PTPRD-203ENST00000381196 METAP1P53582 386 aa4.27□□□□□ -1.73
PTPRD-203ENST00000381196 TESK1Q15569 626 aa4.27□□□□□ -1.73
PTPRD-203ENST00000381196 ACTL10Q5JWF8 245 aa4.27□□□□□ -1.73
PTPRD-203ENST00000381196 SPRED2Q7Z698 418 aa4.27□□□□□ -1.73
PTPRD-203ENST00000381196 FAM24BQ8N5W8 94 aa4.27□□□□□ -1.73
PTPRD-203ENST00000381196 TMEM171Q8WVE6 324 aa4.27□□□□□ -1.73
PTPRD-203ENST00000381196 AP5S1Q9NUS5 200 aa4.27□□□□□ -1.73
PTPRD-203ENST00000381196 TRGV5A0A0B4J1U4 118 aa4.27□□□□□ -1.73
PTPRD-203ENST00000381196 KLF4O43474 513 aa4.27□□□□□ -1.73
PTPRD-203ENST00000381196 OR2J3O76001 311 aa4.27□□□□□ -1.73
PTPRD-203ENST00000381196 CXCL3P19876 107 aa4.27□□□□□ -1.73
PTPRD-203ENST00000381196 LSM11P83369 360 aaKnown RBP eCLIP4.27□□□□□ -1.73
PTPRD-203ENST00000381196 HERPUD1Q15011 391 aa4.27□□□□□ -1.73
PTPRD-203ENST00000381196 FAM90A1Q86YD7 464 aa4.27□□□□□ -1.73
PTPRD-203ENST00000381196 OSR2Q8N2R0 312 aa4.27□□□□□ -1.73
PTPRD-203ENST00000381196 OR8B3Q8NGG8 313 aa4.27□□□□□ -1.73
PTPRD-203ENST00000381196 TMEM255BQ8WV15 326 aa4.27□□□□□ -1.73
PTPRD-203ENST00000381196 MBD3L1Q8WWY6 194 aa4.27□□□□□ -1.73
PTPRD-203ENST00000381196 PGLYRP3Q96LB9 341 aa4.27□□□□□ -1.73
PTPRD-203ENST00000381196 SIGMAR1Q99720 223 aa4.27□□□□□ -1.73
PTPRD-203ENST00000381196 TAS2R4Q9NYW5 299 aa4.27□□□□□ -1.73
PTPRD-203ENST00000381196 DAPP1Q9UN19 280 aa4.27□□□□□ -1.73
PTPRD-203ENST00000381196 SF3B6Q9Y3B4 125 aaKnown RBP4.27□□□□□ -1.73
PTPRD-203ENST00000381196 OR8G3PP0DMU2 310 aa4.27□□□□□ -1.73
PTPRD-203ENST00000381196 REG1BP48304 166 aa4.27□□□□□ -1.73
PTPRD-203ENST00000381196 LHX2P50458 406 aa4.27□□□□□ -1.73
PTPRD-203ENST00000381196 SNRPNP63162 240 aaKnown RBP4.27□□□□□ -1.73
PTPRD-203ENST00000381196 HOXC5Q00444 222 aa4.27□□□□□ -1.73
PTPRD-203ENST00000381196 UBE2V1Q13404 147 aa4.27□□□□□ -1.73
PTPRD-203ENST00000381196 MRPL58Q14197 206 aaKnown RBP4.27□□□□□ -1.73
PTPRD-203ENST00000381196 MORN2Q502X0 79 aa4.27□□□□□ -1.73
PTPRD-203ENST00000381196 SELENOHQ8IZQ5 122 aaKnown RBP4.27□□□□□ -1.73
PTPRD-203ENST00000381196 HIST3H2BBQ8N257 126 aa4.27□□□□□ -1.73
PTPRD-203ENST00000381196 OR1L3Q8NH93 324 aa4.27□□□□□ -1.73
PTPRD-203ENST00000381196 SLC25A33Q9BSK2 321 aa4.27□□□□□ -1.73
PTPRD-203ENST00000381196 FAM234AQ9H0X4 552 aa4.27□□□□□ -1.73
PTPRD-203ENST00000381196 PRSS21Q9Y6M0 314 aa4.27□□□□□ -1.73
PTPRD-203ENST00000381196 COLCA2A8K830 154 aa4.27□□□□□ -1.73
PTPRD-203ENST00000381196 FRS3O43559 492 aa4.27□□□□□ -1.73
PTPRD-203ENST00000381196 OR7C1O76099 320 aaPredicted RBP4.27□□□□□ -1.73
PTPRD-203ENST00000381196 SRSF6Q13247 344 aaKnown RBP4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms