RNA–Protein interactions for RNA: ENST00000380874.3

FOXC1-201, Transcript of forkhead box C1, humanhuman

APPRIS P1 BASIC

Gene FOXC1, Length 3,926 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC1-201ENST00000380874 VWA1Q6PCB0 445 aa16.53■□□□□ 0.24
FOXC1-201ENST00000380874 Q6ZRM9 215 aa16.53■□□□□ 0.24
FOXC1-201ENST00000380874 LRRC29Q8WV35 223 aa16.53■□□□□ 0.24
FOXC1-201ENST00000380874 SARAFQ96BY9 339 aa16.53■□□□□ 0.24
FOXC1-201ENST00000380874 CDX4O14627 284 aaPredicted RBP16.52■□□□□ 0.24
FOXC1-201ENST00000380874 ST8SIA5O15466 376 aa16.52■□□□□ 0.24
FOXC1-201ENST00000380874 SCAF4O95104 1147 aaKnown RBP16.52■□□□□ 0.24
FOXC1-201ENST00000380874 KRTAP27-1Q3LI81 207 aa16.52■□□□□ 0.24
FOXC1-201ENST00000380874 FAM53AQ6NSI3 398 aaPredicted RBP16.52■□□□□ 0.24
FOXC1-201ENST00000380874 ADAMTS20P59510 1910 aa16.52■□□□□ 0.24
FOXC1-201ENST00000380874 MAP1LC3B2A6NCE7 125 aa16.52■□□□□ 0.24
FOXC1-201ENST00000380874 PCSK4Q6UW60 755 aa16.52■□□□□ 0.24
FOXC1-201ENST00000380874 RBMS3Q6XE24 437 aaKnown RBP16.52■□□□□ 0.24
FOXC1-201ENST00000380874 MAP1LC3BQ9GZQ8 125 aa16.52■□□□□ 0.24
FOXC1-201ENST00000380874 PKDREJQ9NTG1 2253 aa16.52■□□□□ 0.24
FOXC1-201ENST00000380874 HBZP02008 142 aa16.52■□□□□ 0.23
FOXC1-201ENST00000380874 CD200P41217 278 aa16.52■□□□□ 0.23
FOXC1-201ENST00000380874 C10orf91Q5T1B1 145 aa16.52■□□□□ 0.23
FOXC1-201ENST00000380874 OR10P1Q8NGE3 313 aa16.52■□□□□ 0.23
FOXC1-201ENST00000380874 M0R1B8 84 aa16.51■□□□□ 0.23
FOXC1-201ENST00000380874 OR4C12Q96R67 309 aa16.51■□□□□ 0.23
FOXC1-201ENST00000380874 FGF7P21781 194 aa16.51■□□□□ 0.23
FOXC1-201ENST00000380874 NKX6-1P78426 367 aaPredicted RBP16.51■□□□□ 0.23
FOXC1-201ENST00000380874 HABP2Q14520 560 aaPredicted RBP16.51■□□□□ 0.23
FOXC1-201ENST00000380874 PROCRQ9UNN8 238 aa16.51■□□□□ 0.23
FOXC1-201ENST00000380874 DCTN5Q9BTE1 182 aa16.51■□□□□ 0.23
FOXC1-201ENST00000380874 HEYLQ9NQ87 328 aaPredicted RBP16.51■□□□□ 0.23
FOXC1-201ENST00000380874 TREM2Q9NZC2 230 aa16.51■□□□□ 0.23
FOXC1-201ENST00000380874 IGF2RP11717 2491 aa16.51■□□□□ 0.23
FOXC1-201ENST00000380874 GPR12P47775 334 aa16.51■□□□□ 0.23
FOXC1-201ENST00000380874 NCKAP5O14513 1909 aa16.5■□□□□ 0.23
FOXC1-201ENST00000380874 SPRY3O43610 288 aa16.5■□□□□ 0.23
FOXC1-201ENST00000380874 SSTR5P35346 364 aa16.5■□□□□ 0.23
FOXC1-201ENST00000380874 GLIPR1P48060 266 aa16.5■□□□□ 0.23
FOXC1-201ENST00000380874 SMIM21Q3B7S5 101 aa16.5■□□□□ 0.23
FOXC1-201ENST00000380874 PRAMEF5Q5TYX0 476 aa16.5■□□□□ 0.23
FOXC1-201ENST00000380874 CST9LP1Q5W188 147 aa16.5■□□□□ 0.23
FOXC1-201ENST00000380874 OPN3Q9H1Y3 402 aaPredicted RBP16.5■□□□□ 0.23
FOXC1-201ENST00000380874 ZNF318Q5VUA4 2279 aa16.5■□□□□ 0.23
FOXC1-201ENST00000380874 IGHV3OR15-7A0A075B7D8 119 aa16.5■□□□□ 0.23
FOXC1-201ENST00000380874 TRAV17A0A0B4J275 112 aa16.5■□□□□ 0.23
FOXC1-201ENST00000380874 SOX15O60248 233 aa16.5■□□□□ 0.23
FOXC1-201ENST00000380874 FCGR3BO75015 233 aa16.5■□□□□ 0.23
FOXC1-201ENST00000380874 MDKP21741 143 aaPredicted RBP16.5■□□□□ 0.23
FOXC1-201ENST00000380874 MDS2Q8NDY4 140 aa16.5■□□□□ 0.23
FOXC1-201ENST00000380874 POM121Q96HA1 1249 aa16.5■□□□□ 0.23
FOXC1-201ENST00000380874 SMIM7Q9BQ49 75 aa16.5■□□□□ 0.23
FOXC1-201ENST00000380874 TNFSF10P50591 281 aa16.49■□□□□ 0.23
FOXC1-201ENST00000380874 ERVK-16P61578 105 aa16.49■□□□□ 0.23
FOXC1-201ENST00000380874 MYO18BQ8IUG5 2567 aa16.49■□□□□ 0.23
FOXC1-201ENST00000380874 COL10A1Q03692 680 aa16.49■□□□□ 0.23
FOXC1-201ENST00000380874 IL22RA2Q969J5 263 aa16.49■□□□□ 0.23
FOXC1-201ENST00000380874 ARV1Q9H2C2 271 aa16.49■□□□□ 0.23
FOXC1-201ENST00000380874 CXXC4Q9H2H0 198 aa16.49■□□□□ 0.23
FOXC1-201ENST00000380874 VSIRQ9H7M9 311 aa16.49■□□□□ 0.23
FOXC1-201ENST00000380874 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.49■□□□□ 0.23
FOXC1-201ENST00000380874 C12orf77C9JDV5 145 aa16.49■□□□□ 0.23
FOXC1-201ENST00000380874 PSPNO60542 156 aa16.49■□□□□ 0.23
FOXC1-201ENST00000380874 INO80CQ6PI98 192 aaPredicted RBP16.49■□□□□ 0.23
FOXC1-201ENST00000380874 OR4F5Q8NH21 305 aa16.49■□□□□ 0.23
FOXC1-201ENST00000380874 PPP1R35Q8TAP8 253 aa16.49■□□□□ 0.23
FOXC1-201ENST00000380874 OR4F4Q96R69 305 aa16.49■□□□□ 0.23
FOXC1-201ENST00000380874 PIEZO2Q9H5I5 2752 aa16.48■□□□□ 0.23
FOXC1-201ENST00000380874 OR4A16Q8NH70 328 aa16.48■□□□□ 0.23
FOXC1-201ENST00000380874 A0A1W2PPE3 182 aa16.48■□□□□ 0.23
FOXC1-201ENST00000380874 M0R1X1 148 aa16.48■□□□□ 0.23
FOXC1-201ENST00000380874 RAMP3O60896 148 aa16.48■□□□□ 0.23
FOXC1-201ENST00000380874 S1PR2O95136 353 aa16.48■□□□□ 0.23
FOXC1-201ENST00000380874 MMP9P14780 707 aa16.48■□□□□ 0.23
FOXC1-201ENST00000380874 SRP19P09132 144 aaKnown RBP16.48■□□□□ 0.23
FOXC1-201ENST00000380874 LINC00205P59089 165 aa16.48■□□□□ 0.23
FOXC1-201ENST00000380874 SELENOVP59797 346 aa16.48■□□□□ 0.23
FOXC1-201ENST00000380874 WDR86Q86TI4 376 aa16.48■□□□□ 0.23
FOXC1-201ENST00000380874 OR5B12Q96R08 314 aa16.48■□□□□ 0.23
FOXC1-201ENST00000380874 RBKSQ9H477 322 aa16.48■□□□□ 0.23
FOXC1-201ENST00000380874 IFT22Q9H7X7 185 aa16.48■□□□□ 0.23
FOXC1-201ENST00000380874 A0A0U1RQK1 487 aa16.47■□□□□ 0.23
FOXC1-201ENST00000380874 A0A1W2PPV4 95 aa16.47■□□□□ 0.23
FOXC1-201ENST00000380874 YIF1AO95070 293 aa16.47■□□□□ 0.23
FOXC1-201ENST00000380874 RPS23P62266 143 aaKnown RBP16.47■□□□□ 0.23
FOXC1-201ENST00000380874 MUCL1Q96DR8 90 aa16.47■□□□□ 0.23
FOXC1-201ENST00000380874 ACACBO00763 2458 aa16.47■□□□□ 0.23
FOXC1-201ENST00000380874 ZNF737O75373 536 aa16.47■□□□□ 0.23
FOXC1-201ENST00000380874 IGKV1-5P01602 117 aa16.47■□□□□ 0.23
FOXC1-201ENST00000380874 PSMB3P49720 205 aa16.47■□□□□ 0.23
FOXC1-201ENST00000380874 UBE2G2P60604 165 aa16.47■□□□□ 0.23
FOXC1-201ENST00000380874 FFAR4Q5NUL3 377 aa16.47■□□□□ 0.23
FOXC1-201ENST00000380874 Q6P435 159 aa16.47■□□□□ 0.23
FOXC1-201ENST00000380874 ZNF610Q8N9Z0 462 aa16.47■□□□□ 0.23
FOXC1-201ENST00000380874 GAB2Q9UQC2 676 aa16.47■□□□□ 0.23
FOXC1-201ENST00000380874 OOEPA6NGQ2 149 aa16.47■□□□□ 0.23
FOXC1-201ENST00000380874 CD55P08174 381 aa16.47■□□□□ 0.23
FOXC1-201ENST00000380874 CABLES2Q9BTV7 478 aa16.47■□□□□ 0.23
FOXC1-201ENST00000380874 RYDENQ9NUL5 291 aaKnown RBP16.47■□□□□ 0.23
FOXC1-201ENST00000380874 CHD8Q9HCK8 2581 aa16.47■□□□□ 0.23
FOXC1-201ENST00000380874 PGA5P0DJD9 388 aa16.46■□□□□ 0.23
FOXC1-201ENST00000380874 ZNF497Q6ZNH5 498 aa16.46■□□□□ 0.23
FOXC1-201ENST00000380874 DTD1Q8TEA8 209 aa16.46■□□□□ 0.23
FOXC1-201ENST00000380874 ENY2Q9NPA8 101 aa16.46■□□□□ 0.23
FOXC1-201ENST00000380874 PDLIM3Q53GG5 364 aaPredicted RBP16.46■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms