RNA–Protein interactions for RNA: ENST00000378526.8

LIG3-202, Transcript of DNA ligase 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIG3, Length 8,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-202ENST00000378526 C1QTNF9P0C862 333 aa7.67□□□□□ -1.18
LIG3-202ENST00000378526 DCAF12Q5T6F0 453 aa7.67□□□□□ -1.18
LIG3-202ENST00000378526 SPTBN1Q01082 2364 aaKnown RBP7.67□□□□□ -1.18
LIG3-202ENST00000378526 PSMB11A5LHX3 300 aa7.67□□□□□ -1.18
LIG3-202ENST00000378526 OR9G9P0C7N8 305 aa7.67□□□□□ -1.18
LIG3-202ENST00000378526 TMEM179BQ7Z7N9 219 aa7.67□□□□□ -1.18
LIG3-202ENST00000378526 C1QL4Q86Z23 238 aa7.67□□□□□ -1.18
LIG3-202ENST00000378526 ZNF114Q8NC26 417 aa7.67□□□□□ -1.18
LIG3-202ENST00000378526 Q9Y3F1 56 aa7.67□□□□□ -1.18
LIG3-202ENST00000378526 TRAV12-3A0A0B4J271 114 aa7.67□□□□□ -1.18
LIG3-202ENST00000378526 EVI2AP22794 236 aa7.67□□□□□ -1.18
LIG3-202ENST00000378526 CDKN3Q16667 212 aa7.67□□□□□ -1.18
LIG3-202ENST00000378526 LAMTOR1Q6IAA8 161 aa7.67□□□□□ -1.18
LIG3-202ENST00000378526 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.67□□□□□ -1.18
LIG3-202ENST00000378526 GPR27Q9NS67 375 aa7.67□□□□□ -1.18
LIG3-202ENST00000378526 CBLN1P23435 193 aa7.66□□□□□ -1.18
LIG3-202ENST00000378526 P2RY2P41231 377 aa7.66□□□□□ -1.18
LIG3-202ENST00000378526 RPS11P62280 158 aaKnown RBP eCLIP7.66□□□□□ -1.18
LIG3-202ENST00000378526 GAGE5Q13069 117 aa7.66□□□□□ -1.18
LIG3-202ENST00000378526 GAGE6Q13070 117 aa7.66□□□□□ -1.18
LIG3-202ENST00000378526 MMDQ15546 238 aa7.66□□□□□ -1.18
LIG3-202ENST00000378526 MBNL2Q5VZF2 373 aaKnown RBP7.66□□□□□ -1.18
LIG3-202ENST00000378526 MRPL32Q9BYC8 188 aaKnown RBP7.66□□□□□ -1.18
LIG3-202ENST00000378526 HCFC2Q9Y5Z7 792 aa7.66□□□□□ -1.18
LIG3-202ENST00000378526 IDSB3KWA1 339 aa7.66□□□□□ -1.18
LIG3-202ENST00000378526 EPPINO95925 133 aa7.66□□□□□ -1.18
LIG3-202ENST00000378526 FAM222BQ8WU58 562 aa7.66□□□□□ -1.18
LIG3-202ENST00000378526 GTF3AQ92664 365 aaKnown RBP7.66□□□□□ -1.18
LIG3-202ENST00000378526 EMC6Q9BV81 110 aa7.66□□□□□ -1.18
LIG3-202ENST00000378526 SPANXB1Q9NS25 103 aaPredicted RBP7.66□□□□□ -1.18
LIG3-202ENST00000378526 FAM90A26D6RGX4 464 aa7.66□□□□□ -1.18
LIG3-202ENST00000378526 WNT9BO14905 357 aa7.66□□□□□ -1.18
LIG3-202ENST00000378526 FCN3O75636 299 aa7.66□□□□□ -1.18
LIG3-202ENST00000378526 PPICP45877 212 aa7.66□□□□□ -1.18
LIG3-202ENST00000378526 COL5A2P05997 1499 aaPredicted RBP7.66□□□□□ -1.18
LIG3-202ENST00000378526 NTN1O95631 604 aa7.66□□□□□ -1.18
LIG3-202ENST00000378526 MDKP21741 143 aaPredicted RBP7.66□□□□□ -1.18
LIG3-202ENST00000378526 YPEL5P62699 121 aa7.66□□□□□ -1.18
LIG3-202ENST00000378526 FAM182BQ5T319 152 aa7.66□□□□□ -1.18
LIG3-202ENST00000378526 Q6ZSR6 202 aa7.66□□□□□ -1.18
LIG3-202ENST00000378526 BOD1L2Q8IYS8 172 aa7.66□□□□□ -1.18
LIG3-202ENST00000378526 PGLYRP3Q96LB9 341 aa7.66□□□□□ -1.18
LIG3-202ENST00000378526 SCGB3A1Q96QR1 104 aa7.66□□□□□ -1.18
LIG3-202ENST00000378526 SMPXQ9UHP9 88 aa7.66□□□□□ -1.18
LIG3-202ENST00000378526 NUP98P52948 1817 aa7.66□□□□□ -1.18
LIG3-202ENST00000378526 NEURL4Q96JN8 1562 aa7.66□□□□□ -1.18
LIG3-202ENST00000378526 CA11O75493 328 aa7.66□□□□□ -1.18
LIG3-202ENST00000378526 UMODP07911 640 aa7.66□□□□□ -1.18
LIG3-202ENST00000378526 INAFM2P0DMQ5 153 aa7.66□□□□□ -1.18
LIG3-202ENST00000378526 LHX2P50458 406 aa7.66□□□□□ -1.18
LIG3-202ENST00000378526 OR52M1Q8NGK5 317 aa7.66□□□□□ -1.18
LIG3-202ENST00000378526 H0YL77 283 aa7.66□□□□□ -1.18
LIG3-202ENST00000378526 MALP21145 153 aa7.66□□□□□ -1.18
LIG3-202ENST00000378526 SOX8P57073 446 aa7.66□□□□□ -1.18
LIG3-202ENST00000378526 RHOGP84095 191 aa7.66□□□□□ -1.18
LIG3-202ENST00000378526 RASL11AQ6T310 242 aa7.66□□□□□ -1.18
LIG3-202ENST00000378526 ASCL5Q7RTU5 278 aa7.66□□□□□ -1.18
LIG3-202ENST00000378526 CST9LQ9H4G1 147 aa7.66□□□□□ -1.18
LIG3-202ENST00000378526 TRBV20OR9-2A0A075B6H5 130 aa7.65□□□□□ -1.18
LIG3-202ENST00000378526 TMEM238C9JI98 176 aa7.65□□□□□ -1.18
LIG3-202ENST00000378526 NRG2O14511 850 aaPredicted RBP7.65□□□□□ -1.18
LIG3-202ENST00000378526 CRPP02741 224 aa7.65□□□□□ -1.18
LIG3-202ENST00000378526 ARL14EPLP0DKL9 152 aa7.65□□□□□ -1.18
LIG3-202ENST00000378526 BCORP1Q8N888 145 aa7.65□□□□□ -1.18
LIG3-202ENST00000378526 CLEC4DQ8WXI8 215 aa7.65□□□□□ -1.18
LIG3-202ENST00000378526 C6orf106Q9H6K1 298 aaPredicted RBP7.65□□□□□ -1.18
LIG3-202ENST00000378526 NEUROG3Q9Y4Z2 214 aa7.65□□□□□ -1.18
LIG3-202ENST00000378526 TMSB15BA0A087X1C1 80 aa7.65□□□□□ -1.18
LIG3-202ENST00000378526 ZNF205O95201 554 aa7.65□□□□□ -1.18
LIG3-202ENST00000378526 PTGER1P34995 402 aa7.65□□□□□ -1.18
LIG3-202ENST00000378526 PFN3P60673 137 aa7.65□□□□□ -1.18
LIG3-202ENST00000378526 GAGE2AQ6NT46 116 aa7.65□□□□□ -1.18
LIG3-202ENST00000378526 ORMDL3Q8N138 153 aa7.65□□□□□ -1.18
LIG3-202ENST00000378526 RPRMQ9NS64 109 aa7.65□□□□□ -1.18
LIG3-202ENST00000378526 A0A1B0GUL6 1792 aa7.65□□□□□ -1.18
LIG3-202ENST00000378526 A0A1W2PS18 150 aa7.65□□□□□ -1.18
LIG3-202ENST00000378526 K7EQS6 105 aa7.65□□□□□ -1.18
LIG3-202ENST00000378526 NPFFO15130 113 aa7.65□□□□□ -1.18
LIG3-202ENST00000378526 GPX4P36969 197 aaPredicted RBP7.65□□□□□ -1.18
LIG3-202ENST00000378526 LIM2P55344 173 aa7.65□□□□□ -1.18
LIG3-202ENST00000378526 C1orf194Q5T5A4 169 aa7.65□□□□□ -1.18
LIG3-202ENST00000378526 CLEC2AQ6UVW9 174 aa7.65□□□□□ -1.18
LIG3-202ENST00000378526 GGTLC1Q9BX51 225 aa7.65□□□□□ -1.18
LIG3-202ENST00000378526 FOCADQ5VW36 1801 aa7.65□□□□□ -1.18
LIG3-202ENST00000378526 NUBP1P53384 320 aa7.65□□□□□ -1.18
LIG3-202ENST00000378526 RND3P61587 244 aa7.65□□□□□ -1.18
LIG3-202ENST00000378526 WDR38Q5JTN6 314 aa7.65□□□□□ -1.18
LIG3-202ENST00000378526 C2orf82Q6UX34 121 aa7.65□□□□□ -1.18
LIG3-202ENST00000378526 MRPL43Q8N983 215 aaKnown RBP7.65□□□□□ -1.18
LIG3-202ENST00000378526 NRN1Q9NPD7 142 aa7.65□□□□□ -1.18
LIG3-202ENST00000378526 ARFGEF3Q5TH69 2177 aa7.65□□□□□ -1.18
LIG3-202ENST00000378526 MRPL55Q7Z7F7 128 aaKnown RBP7.65□□□□□ -1.19
LIG3-202ENST00000378526 TMEM170AQ8WVE7 144 aa7.65□□□□□ -1.19
LIG3-202ENST00000378526 MRPL24Q96A35 216 aaKnown RBP7.65□□□□□ -1.19
LIG3-202ENST00000378526 MED29Q9NX70 200 aa7.65□□□□□ -1.19
LIG3-202ENST00000378526 IL36RNQ9UBH0 155 aa7.65□□□□□ -1.19
LIG3-202ENST00000378526 NKX2-6A6NCS4 301 aa7.65□□□□□ -1.19
LIG3-202ENST00000378526 J3KT08 172 aa7.65□□□□□ -1.19
LIG3-202ENST00000378526 PSMB5P28074 263 aa7.65□□□□□ -1.19
LIG3-202ENST00000378526 SPINK9Q5DT21 86 aa7.65□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms