RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 KCNJ16Q9NPI9 418 aa6.84□□□□□ -1.31
CKAP2-203ENST00000378037 DCHS2Q6V1P9 2916 aa6.84□□□□□ -1.32
CKAP2-203ENST00000378037 CD3EP07766 207 aa6.83□□□□□ -1.32
CKAP2-203ENST00000378037 TRAPPC2P0DI81 140 aa6.83□□□□□ -1.32
CKAP2-203ENST00000378037 TRAPPC2BP0DI82 140 aa6.83□□□□□ -1.32
CKAP2-203ENST00000378037 RD3LP0DJH9 198 aa6.83□□□□□ -1.32
CKAP2-203ENST00000378037 AANATQ16613 207 aa6.83□□□□□ -1.32
CKAP2-203ENST00000378037 MPV17LQ2QL34 196 aa6.83□□□□□ -1.32
CKAP2-203ENST00000378037 HFEQ30201 348 aa6.83□□□□□ -1.32
CKAP2-203ENST00000378037 HCP5Q6MZN7 132 aa6.83□□□□□ -1.32
CKAP2-203ENST00000378037 WFIKKN1Q96NZ8 548 aa6.83□□□□□ -1.32
CKAP2-203ENST00000378037 OR2W1Q9Y3N9 320 aa6.83□□□□□ -1.32
CKAP2-203ENST00000378037 ZANQ9Y493 2812 aa6.83□□□□□ -1.32
CKAP2-203ENST00000378037 TRAV14DV4A0A0A6YYC5 116 aa6.83□□□□□ -1.32
CKAP2-203ENST00000378037 ARG1P05089 322 aa6.83□□□□□ -1.32
CKAP2-203ENST00000378037 CTSSP25774 331 aa6.83□□□□□ -1.32
CKAP2-203ENST00000378037 SUPT4H1P63272 117 aaKnown RBP6.83□□□□□ -1.32
CKAP2-203ENST00000378037 LIAT1Q6ZQX7 453 aa6.83□□□□□ -1.32
CKAP2-203ENST00000378037 WDR86Q86TI4 376 aa6.83□□□□□ -1.32
CKAP2-203ENST00000378037 ABHD12Q8N2K0 398 aa6.83□□□□□ -1.32
CKAP2-203ENST00000378037 OR2C3Q8N628 320 aa6.83□□□□□ -1.32
CKAP2-203ENST00000378037 ZDHHC22Q8N966 263 aa6.83□□□□□ -1.32
CKAP2-203ENST00000378037 NTNG2Q96CW9 530 aa6.83□□□□□ -1.32
CKAP2-203ENST00000378037 ZDHHC11Q9H8X9 412 aa6.83□□□□□ -1.32
CKAP2-203ENST00000378037 SH2D2AQ9NP31 389 aa6.83□□□□□ -1.32
CKAP2-203ENST00000378037 MMP24Q9Y5R2 645 aa6.83□□□□□ -1.32
CKAP2-203ENST00000378037 GCN1Q92616 2671 aaKnown RBP6.83□□□□□ -1.32
CKAP2-203ENST00000378037 CSMD1Q96PZ7 3565 aa6.83□□□□□ -1.32
CKAP2-203ENST00000378037 LEUTXA8MZ59 168 aa6.83□□□□□ -1.32
CKAP2-203ENST00000378037 HLA-DRB3P79483 266 aa6.83□□□□□ -1.32
CKAP2-203ENST00000378037 FAM166AQ6J272 317 aa6.83□□□□□ -1.32
CKAP2-203ENST00000378037 PIP4P1Q86T03 277 aa6.83□□□□□ -1.32
CKAP2-203ENST00000378037 BPIFCQ8NFQ6 507 aa6.83□□□□□ -1.32
CKAP2-203ENST00000378037 CNTNAP3BQ96NU0 1288 aa6.83□□□□□ -1.32
CKAP2-203ENST00000378037 FAM215AQ9Y5M1 114 aa6.83□□□□□ -1.32
CKAP2-203ENST00000378037 IGHV3OR16-13A0A075B7E8 117 aa6.82□□□□□ -1.32
CKAP2-203ENST00000378037 IGHV3-74A0A0B4J1X5 117 aa6.82□□□□□ -1.32
CKAP2-203ENST00000378037 A0A1W2PPV4 95 aa6.82□□□□□ -1.32
CKAP2-203ENST00000378037 NPIPB13A6NJU9 1138 aa6.82□□□□□ -1.32
CKAP2-203ENST00000378037 C17orf98A8MV24 154 aa6.82□□□□□ -1.32
CKAP2-203ENST00000378037 NPIPB4C9JG80 1138 aa6.82□□□□□ -1.32
CKAP2-203ENST00000378037 BCL2L11O43521 198 aa6.82□□□□□ -1.32
CKAP2-203ENST00000378037 RNF141Q8WVD5 230 aa6.82□□□□□ -1.32
CKAP2-203ENST00000378037 PRELID3BQ9Y3B1 194 aa6.82□□□□□ -1.32
CKAP2-203ENST00000378037 NDUFB3O43676 98 aa6.82□□□□□ -1.32
CKAP2-203ENST00000378037 PGLYRP1O75594 196 aaPredicted RBP6.82□□□□□ -1.32
CKAP2-203ENST00000378037 GATA2P23769 480 aaPredicted RBP6.82□□□□□ -1.32
CKAP2-203ENST00000378037 CD82P27701 267 aa6.82□□□□□ -1.32
CKAP2-203ENST00000378037 F2RL1P55085 397 aa6.82□□□□□ -1.32
CKAP2-203ENST00000378037 EIF5AP63241 154 aaKnown RBP6.82□□□□□ -1.32
CKAP2-203ENST00000378037 MRPS11P82912 194 aaKnown RBP6.82□□□□□ -1.32
CKAP2-203ENST00000378037 SRSF3P84103 164 aaKnown RBP6.82□□□□□ -1.32
CKAP2-203ENST00000378037 ZNF529Q6P280 563 aa6.82□□□□□ -1.32
CKAP2-203ENST00000378037 DBX2Q6ZNG2 339 aa6.82□□□□□ -1.32
CKAP2-203ENST00000378037 Q6ZR03 302 aa6.82□□□□□ -1.32
CKAP2-203ENST00000378037 SPICQ8N5J4 248 aa6.82□□□□□ -1.32
CKAP2-203ENST00000378037 DRAM1Q8N682 238 aa6.82□□□□□ -1.32
CKAP2-203ENST00000378037 TVP23CQ96ET8 276 aa6.82□□□□□ -1.32
CKAP2-203ENST00000378037 TSPAN9O75954 239 aa6.82□□□□□ -1.32
CKAP2-203ENST00000378037 NMBP08949 121 aa6.82□□□□□ -1.32
CKAP2-203ENST00000378037 CPN1P15169 458 aa6.82□□□□□ -1.32
CKAP2-203ENST00000378037 CSRP1P21291 193 aaKnown RBP6.82□□□□□ -1.32
CKAP2-203ENST00000378037 COL8A1P27658 744 aa6.82□□□□□ -1.32
CKAP2-203ENST00000378037 RAB13P51153 203 aa6.82□□□□□ -1.32
CKAP2-203ENST00000378037 UBA52P62987 128 aaKnown RBP6.82□□□□□ -1.32
CKAP2-203ENST00000378037 WDR82Q6UXN9 313 aa6.82□□□□□ -1.32
CKAP2-203ENST00000378037 FAM103A1Q9BTL3 118 aaKnown RBP6.82□□□□□ -1.32
CKAP2-203ENST00000378037 CNTNAP3Q9BZ76 1288 aa6.82□□□□□ -1.32
CKAP2-203ENST00000378037 SLC39A9Q9NUM3 307 aa6.82□□□□□ -1.32
CKAP2-203ENST00000378037 RNF7Q9UBF6 113 aa6.82□□□□□ -1.32
CKAP2-203ENST00000378037 SLC25A10Q9UBX3 287 aaPredicted RBP6.82□□□□□ -1.32
CKAP2-203ENST00000378037 EDARQ9UNE0 448 aa6.82□□□□□ -1.32
CKAP2-203ENST00000378037 ODAMA1E959 279 aa6.81□□□□□ -1.32
CKAP2-203ENST00000378037 NKX6-3A6NJ46 265 aa6.81□□□□□ -1.32
CKAP2-203ENST00000378037 ATG12O94817 140 aa6.81□□□□□ -1.32
CKAP2-203ENST00000378037 CTSDP07339 412 aaPredicted RBP6.81□□□□□ -1.32
CKAP2-203ENST00000378037 H2AFB1P0C5Y9 115 aa6.81□□□□□ -1.32
CKAP2-203ENST00000378037 OR5G3P0C626 314 aa6.81□□□□□ -1.32
CKAP2-203ENST00000378037 F2RP25116 425 aa6.81□□□□□ -1.32
CKAP2-203ENST00000378037 LGALS4P56470 323 aa6.81□□□□□ -1.32
CKAP2-203ENST00000378037 TMPRSS3P57727 454 aa6.81□□□□□ -1.32
CKAP2-203ENST00000378037 QRFPP83859 136 aa6.81□□□□□ -1.32
CKAP2-203ENST00000378037 HERPUD1Q15011 391 aa6.81□□□□□ -1.32
CKAP2-203ENST00000378037 P2RY6Q15077 328 aa6.81□□□□□ -1.32
CKAP2-203ENST00000378037 C10orf55Q5SWW7 151 aa6.81□□□□□ -1.32
CKAP2-203ENST00000378037 ACSM6Q6P461 480 aa6.81□□□□□ -1.32
CKAP2-203ENST00000378037 NRGNQ92686 78 aa6.81□□□□□ -1.32
CKAP2-203ENST00000378037 SPRY4Q9C004 299 aa6.81□□□□□ -1.32
CKAP2-203ENST00000378037 Q9N2K0 584 aa6.81□□□□□ -1.32
CKAP2-203ENST00000378037 NUP210LQ5VU65 1888 aa6.81□□□□□ -1.32
CKAP2-203ENST00000378037 CHD3Q12873 2000 aaKnown RBP6.81□□□□□ -1.32
CKAP2-203ENST00000378037 PQLC2LA1A4F0 135 aa6.81□□□□□ -1.32
CKAP2-203ENST00000378037 TNFSF13O75888 250 aa6.81□□□□□ -1.32
CKAP2-203ENST00000378037 CD1AP06126 327 aa6.81□□□□□ -1.32
CKAP2-203ENST00000378037 COL8A2P25067 703 aa6.81□□□□□ -1.32
CKAP2-203ENST00000378037 RAB4BP61018 213 aa6.81□□□□□ -1.32
CKAP2-203ENST00000378037 GAMTQ14353 236 aa6.81□□□□□ -1.32
CKAP2-203ENST00000378037 GUCA2BQ16661 112 aa6.81□□□□□ -1.32
CKAP2-203ENST00000378037 MSMPQ1L6U9 139 aa6.81□□□□□ -1.32
CKAP2-203ENST00000378037 UTF1Q5T230 341 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms