RNA–Protein interactions for RNA: ENST00000378026.4

CKAP4-201, Transcript of cytoskeleton associated protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKAP4, Length 3,093 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-201ENST00000378026 BRS3P32247 399 aa13.47□□□□□ -0.25
CKAP4-201ENST00000378026 TFF3Q07654 80 aa13.47□□□□□ -0.25
CKAP4-201ENST00000378026 TRA2AQ13595 282 aaKnown RBP eCLIP13.47□□□□□ -0.25
CKAP4-201ENST00000378026 SGMS2Q8NHU3 365 aa13.47□□□□□ -0.25
CKAP4-201ENST00000378026 OR2H1Q9GZK4 316 aa13.47□□□□□ -0.25
CKAP4-201ENST00000378026 FGF23Q9GZV9 251 aaPredicted RBP13.47□□□□□ -0.25
CKAP4-201ENST00000378026 FAM186AA6NE01 2351 aa13.47□□□□□ -0.25
CKAP4-201ENST00000378026 SCRG1O75711 98 aa13.47□□□□□ -0.25
CKAP4-201ENST00000378026 VAMP5O95183 116 aa13.47□□□□□ -0.25
CKAP4-201ENST00000378026 Q6ZWC4 215 aa13.47□□□□□ -0.25
CKAP4-201ENST00000378026 HLA-CQ95604 372 aa13.47□□□□□ -0.25
CKAP4-201ENST00000378026 HSPB9Q9BQS6 159 aa13.47□□□□□ -0.25
CKAP4-201ENST00000378026 CTXND1A0A1B0GTU2 59 aa13.46□□□□□ -0.25
CKAP4-201ENST00000378026 OR6C6A6NF89 314 aa13.46□□□□□ -0.25
CKAP4-201ENST00000378026 TRAPPC2LH3BP13 241 aa13.46□□□□□ -0.25
CKAP4-201ENST00000378026 M0QZK8 103 aa13.46□□□□□ -0.25
CKAP4-201ENST00000378026 TP53I11O14683 189 aa13.46□□□□□ -0.25
CKAP4-201ENST00000378026 RPL15P61313 204 aaKnown RBP13.46□□□□□ -0.25
CKAP4-201ENST00000378026 PRDX4Q13162 271 aa13.46□□□□□ -0.25
CKAP4-201ENST00000378026 ZNF324BQ6AW86 544 aaPredicted RBP13.46□□□□□ -0.25
CKAP4-201ENST00000378026 ZNF114Q8NC26 417 aa13.46□□□□□ -0.25
CKAP4-201ENST00000378026 PSMF1Q92530 271 aa13.46□□□□□ -0.25
CKAP4-201ENST00000378026 WDYHV1Q96HA8 205 aa13.46□□□□□ -0.25
CKAP4-201ENST00000378026 FOXB1Q99853 325 aa13.46□□□□□ -0.25
CKAP4-201ENST00000378026 ZDHHC11Q9H8X9 412 aa13.46□□□□□ -0.25
CKAP4-201ENST00000378026 CLN8Q9UBY8 286 aa13.46□□□□□ -0.25
CKAP4-201ENST00000378026 MRPS18CQ9Y3D5 142 aaKnown RBP13.46□□□□□ -0.25
CKAP4-201ENST00000378026 NDUFB4O95168 129 aa13.46□□□□□ -0.25
CKAP4-201ENST00000378026 CLDN15P56746 228 aa13.46□□□□□ -0.25
CKAP4-201ENST00000378026 MRPS11P82912 194 aaKnown RBP13.46□□□□□ -0.25
CKAP4-201ENST00000378026 FAM103A1Q9BTL3 118 aaKnown RBP13.46□□□□□ -0.25
CKAP4-201ENST00000378026 OR2J1Q9GZK6 312 aa13.46□□□□□ -0.25
CKAP4-201ENST00000378026 TMEM106BQ9NUM4 274 aa13.46□□□□□ -0.25
CKAP4-201ENST00000378026 R4GN57 208 aa13.46□□□□□ -0.25
CKAP4-201ENST00000378026 SIAH2O43255 324 aa13.45□□□□□ -0.26
CKAP4-201ENST00000378026 ATP5G3P48201 142 aa13.45□□□□□ -0.26
CKAP4-201ENST00000378026 THBS3P49746 956 aa13.45□□□□□ -0.26
CKAP4-201ENST00000378026 FGF12P61328 243 aa13.45□□□□□ -0.26
CKAP4-201ENST00000378026 RNPS1Q15287 305 aaKnown RBP13.45□□□□□ -0.26
CKAP4-201ENST00000378026 AAED1Q7RTV5 226 aa13.45□□□□□ -0.26
CKAP4-201ENST00000378026 YRDCQ86U90 279 aaKnown RBP13.45□□□□□ -0.26
CKAP4-201ENST00000378026 PXMP4Q9Y6I8 212 aa13.45□□□□□ -0.26
CKAP4-201ENST00000378026 A0A1W2PR77 199 aa13.45□□□□□ -0.26
CKAP4-201ENST00000378026 TYMSP04818 313 aa13.45□□□□□ -0.26
CKAP4-201ENST00000378026 CTXN2P0C2S0 81 aa13.45□□□□□ -0.26
CKAP4-201ENST00000378026 ZXDAP98168 799 aa13.45□□□□□ -0.26
CKAP4-201ENST00000378026 LINC01551Q86U37 167 aa13.45□□□□□ -0.26
CKAP4-201ENST00000378026 MIEN1Q9BRT3 115 aa13.45□□□□□ -0.26
CKAP4-201ENST00000378026 RYDENQ9NUL5 291 aaKnown RBP13.45□□□□□ -0.26
CKAP4-201ENST00000378026 CACNA1DQ01668 2161 aa13.45□□□□□ -0.26
CKAP4-201ENST00000378026 IGHV1OR15-9A0A0B4J2B8 117 aa13.45□□□□□ -0.26
CKAP4-201ENST00000378026 ZIC3O60481 467 aa13.45□□□□□ -0.26
CKAP4-201ENST00000378026 KRASP01116 189 aa13.45□□□□□ -0.26
CKAP4-201ENST00000378026 CBLN1P23435 193 aa13.45□□□□□ -0.26
CKAP4-201ENST00000378026 GCSAMLQ5JQS6 135 aa13.45□□□□□ -0.26
CKAP4-201ENST00000378026 MKXQ8IYA7 352 aa13.45□□□□□ -0.26
CKAP4-201ENST00000378026 CPEB3Q8NE35 698 aaKnown RBP13.45□□□□□ -0.26
CKAP4-201ENST00000378026 OR51B6Q9H340 312 aa13.45□□□□□ -0.26
CKAP4-201ENST00000378026 CLEC1BQ9P126 229 aa13.45□□□□□ -0.26
CKAP4-201ENST00000378026 A0A096LPE4 126 aa13.44□□□□□ -0.26
CKAP4-201ENST00000378026 A0A1W2PPZ6 126 aa13.44□□□□□ -0.26
CKAP4-201ENST00000378026 C10orf142B7Z368 130 aa13.44□□□□□ -0.26
CKAP4-201ENST00000378026 ZNF585BQ52M93 769 aa13.44□□□□□ -0.26
CKAP4-201ENST00000378026 TSTD1Q8NFU3 115 aa13.44□□□□□ -0.26
CKAP4-201ENST00000378026 VAMP8Q9BV40 100 aa13.44□□□□□ -0.26
CKAP4-201ENST00000378026 MTIF3Q9H2K0 278 aaKnown RBP13.44□□□□□ -0.26
CKAP4-201ENST00000378026 IGHV3-64DA0A0J9YX35 117 aa13.44□□□□□ -0.26
CKAP4-201ENST00000378026 F2Z2F3 143 aa13.44□□□□□ -0.26
CKAP4-201ENST00000378026 TMEM9BQ9NQ34 198 aa13.44□□□□□ -0.26
CKAP4-201ENST00000378026 GDF9O60383 454 aa13.43□□□□□ -0.26
CKAP4-201ENST00000378026 RBMXL2O75526 392 aaKnown RBP13.43□□□□□ -0.26
CKAP4-201ENST00000378026 CD27P26842 260 aa13.43□□□□□ -0.26
CKAP4-201ENST00000378026 GNG10P50151 68 aa13.43□□□□□ -0.26
CKAP4-201ENST00000378026 GNB1P62873 340 aa13.43□□□□□ -0.26
CKAP4-201ENST00000378026 Q6ZS49 121 aa13.43□□□□□ -0.26
CKAP4-201ENST00000378026 FGFRL1Q8N441 504 aa13.43□□□□□ -0.26
CKAP4-201ENST00000378026 C11orf42Q8N5U0 333 aa13.43□□□□□ -0.26
CKAP4-201ENST00000378026 OR1L1Q8NH94 360 aa13.43□□□□□ -0.26
CKAP4-201ENST00000378026 DOCK7Q96N67 2140 aa13.43□□□□□ -0.26
CKAP4-201ENST00000378026 SAMD10Q9BYL1 202 aa13.43□□□□□ -0.26
CKAP4-201ENST00000378026 GPR35Q9HC97 309 aa13.43□□□□□ -0.26
CKAP4-201ENST00000378026 URB1O60287 2271 aaKnown RBP13.43□□□□□ -0.26
CKAP4-201ENST00000378026 TRAV38-1A0A0B4J264 116 aa13.43□□□□□ -0.26
CKAP4-201ENST00000378026 TOX3O15405 576 aaPredicted RBP13.43□□□□□ -0.26
CKAP4-201ENST00000378026 CXCL13O43927 109 aa13.43□□□□□ -0.26
CKAP4-201ENST00000378026 SERF1AO75920 110 aa13.43□□□□□ -0.26
CKAP4-201ENST00000378026 FREM1Q5H8C1 2179 aa13.43□□□□□ -0.26
CKAP4-201ENST00000378026 RBFOX2O43251 390 aaKnown RBP eCLIP13.43□□□□□ -0.26
CKAP4-201ENST00000378026 TNFSF13O75888 250 aa13.43□□□□□ -0.26
CKAP4-201ENST00000378026 PIAS2O75928 621 aa13.43□□□□□ -0.26
CKAP4-201ENST00000378026 CD82P27701 267 aa13.43□□□□□ -0.26
CKAP4-201ENST00000378026 SOX8P57073 446 aa13.43□□□□□ -0.26
CKAP4-201ENST00000378026 LCN2P80188 198 aa13.43□□□□□ -0.26
CKAP4-201ENST00000378026 ZNF816Q0VGE8 651 aaPredicted RBP13.43□□□□□ -0.26
CKAP4-201ENST00000378026 TPTE2P1Q5T6R2 138 aa13.43□□□□□ -0.26
CKAP4-201ENST00000378026 ZNF709Q8N972 641 aa13.43□□□□□ -0.26
CKAP4-201ENST00000378026 IGLV3-12A0A075B6K2 115 aa13.42□□□□□ -0.26
CKAP4-201ENST00000378026 IGLV2-14P01704 120 aa13.42□□□□□ -0.26
CKAP4-201ENST00000378026 COX5AP20674 150 aa13.42□□□□□ -0.26
CKAP4-201ENST00000378026 G6PCP35575 357 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms