RNA–Protein interactions for RNA: ENST00000377707.3

SHB-201, Transcript of SH2 domain containing adaptor protein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHB, Length 2,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHB-201ENST00000377707 OR1K1Q8NGR3 316 aa17.14■□□□□ 0.33
SHB-201ENST00000377707 TMEM56Q96MV1 263 aa17.14■□□□□ 0.33
SHB-201ENST00000377707 COL25A1Q9BXS0 654 aaPredicted RBP17.14■□□□□ 0.33
SHB-201ENST00000377707 VSIRQ9H7M9 311 aa17.14■□□□□ 0.33
SHB-201ENST00000377707 TMEM56-RWDD3S4R434 201 aa17.14■□□□□ 0.33
SHB-201ENST00000377707 H3BQ15 152 aa17.13■□□□□ 0.33
SHB-201ENST00000377707 HIST1H2BKO60814 126 aa17.13■□□□□ 0.33
SHB-201ENST00000377707 NEURL1O76050 574 aa17.13■□□□□ 0.33
SHB-201ENST00000377707 HIST1H2BJP06899 126 aa17.13■□□□□ 0.33
SHB-201ENST00000377707 CA6P23280 308 aa17.13■□□□□ 0.33
SHB-201ENST00000377707 HIST1H2BOP23527 126 aa17.13■□□□□ 0.33
SHB-201ENST00000377707 HIST1H2BBP33778 126 aa17.13■□□□□ 0.33
SHB-201ENST00000377707 HIST1H2BDP58876 126 aa17.13■□□□□ 0.33
SHB-201ENST00000377707 HIST1H2BCP62807 126 aa17.13■□□□□ 0.33
SHB-201ENST00000377707 HIST2H2BEQ16778 126 aa17.13■□□□□ 0.33
SHB-201ENST00000377707 HIST2H2BFQ5QNW6 126 aaPredicted RBP17.13■□□□□ 0.33
SHB-201ENST00000377707 COLCA1Q6ZS62 124 aa17.13■□□□□ 0.33
SHB-201ENST00000377707 NUFIP2Q7Z417 695 aaKnown RBP17.13■□□□□ 0.33
SHB-201ENST00000377707 HIST1H2BHQ93079 126 aa17.13■□□□□ 0.33
SHB-201ENST00000377707 HIST1H2BNQ99877 126 aa17.13■□□□□ 0.33
SHB-201ENST00000377707 HIST1H2BMQ99879 126 aa17.13■□□□□ 0.33
SHB-201ENST00000377707 STRAPQ9Y3F4 350 aaKnown RBP17.13■□□□□ 0.33
SHB-201ENST00000377707 LHX2P50458 406 aa17.13■□□□□ 0.33
SHB-201ENST00000377707 FGF8P55075 233 aaPredicted RBP17.13■□□□□ 0.33
SHB-201ENST00000377707 PCSK4Q6UW60 755 aa17.13■□□□□ 0.33
SHB-201ENST00000377707 OR1J1Q8NGS3 322 aa17.13■□□□□ 0.33
SHB-201ENST00000377707 RAB39BQ96DA2 213 aa17.13■□□□□ 0.33
SHB-201ENST00000377707 CSTL1Q9H114 145 aa17.13■□□□□ 0.33
SHB-201ENST00000377707 PPP1R3CQ9UQK1 317 aa17.13■□□□□ 0.33
SHB-201ENST00000377707 YLPM1P49750 1951 aaKnown RBP17.13■□□□□ 0.33
SHB-201ENST00000377707 NKX6-3A6NJ46 265 aa17.12■□□□□ 0.33
SHB-201ENST00000377707 OR5I1Q13606 314 aa17.12■□□□□ 0.33
SHB-201ENST00000377707 ZNF266Q14584 549 aa17.12■□□□□ 0.33
SHB-201ENST00000377707 CEACAM21Q3KPI0 293 aa17.12■□□□□ 0.33
SHB-201ENST00000377707 PRSS50Q9UI38 385 aa17.12■□□□□ 0.33
SHB-201ENST00000377707 ZNF705GA8MUZ8 300 aaPredicted RBP17.12■□□□□ 0.33
SHB-201ENST00000377707 CYC1P08574 325 aa17.12■□□□□ 0.33
SHB-201ENST00000377707 TAGLN2P37802 199 aaKnown RBP17.12■□□□□ 0.33
SHB-201ENST00000377707 MKXQ8IYA7 352 aa17.12■□□□□ 0.33
SHB-201ENST00000377707 OR2M7Q8NG81 312 aa17.12■□□□□ 0.33
SHB-201ENST00000377707 MRPL30Q8TCC3 161 aaKnown RBP17.12■□□□□ 0.33
SHB-201ENST00000377707 ZNF391Q9UJN7 358 aa17.12■□□□□ 0.33
SHB-201ENST00000377707 TRAV24A0A0B4J272 114 aa17.11■□□□□ 0.33
SHB-201ENST00000377707 PITX3O75364 302 aa17.11■□□□□ 0.33
SHB-201ENST00000377707 CNOT4O95628 575 aaKnown RBP17.11■□□□□ 0.33
SHB-201ENST00000377707 IGHEP01854 428 aa17.11■□□□□ 0.33
SHB-201ENST00000377707 CLDN18P56856 261 aa17.11■□□□□ 0.33
SHB-201ENST00000377707 ZNF295-AS1Q8N0V1 137 aa17.11■□□□□ 0.33
SHB-201ENST00000377707 DEFB124Q8NES8 71 aa17.11■□□□□ 0.33
SHB-201ENST00000377707 GPR146Q96CH1 333 aa17.11■□□□□ 0.33
SHB-201ENST00000377707 HIST1H2BLQ99880 126 aa17.11■□□□□ 0.33
SHB-201ENST00000377707 PLSCR2Q9NRY7 297 aa17.11■□□□□ 0.33
SHB-201ENST00000377707 SPTBN2O15020 2390 aa17.11■□□□□ 0.33
SHB-201ENST00000377707 C20orf202A1L168 122 aa17.11■□□□□ 0.33
SHB-201ENST00000377707 CD300LBA8K4G0 201 aa17.11■□□□□ 0.33
SHB-201ENST00000377707 IRF2P14316 349 aa17.11■□□□□ 0.33
SHB-201ENST00000377707 MRPL49Q13405 166 aaKnown RBP17.11■□□□□ 0.33
SHB-201ENST00000377707 ZNF674Q2M3X9 581 aa17.11■□□□□ 0.33
SHB-201ENST00000377707 Q5PR19 223 aa17.11■□□□□ 0.33
SHB-201ENST00000377707 C6orf15Q6UXA7 325 aaPredicted RBP17.11■□□□□ 0.33
SHB-201ENST00000377707 FOXJ2Q9P0K8 574 aa17.11■□□□□ 0.33
SHB-201ENST00000377707 ZFP30Q9Y2G7 519 aa17.11■□□□□ 0.33
SHB-201ENST00000377707 CXCL1P09341 107 aa17.11■□□□□ 0.33
SHB-201ENST00000377707 VDAC1P21796 283 aa17.11■□□□□ 0.33
SHB-201ENST00000377707 MAP1BP46821 2468 aaKnown RBP17.11■□□□□ 0.33
SHB-201ENST00000377707 ID3Q02535 119 aa17.11■□□□□ 0.33
SHB-201ENST00000377707 OR8G2PQ6IF36 304 aa17.11■□□□□ 0.33
SHB-201ENST00000377707 COMMD1Q8N668 190 aa17.11■□□□□ 0.33
SHB-201ENST00000377707 ATP23Q9Y6H3 246 aa17.11■□□□□ 0.33
SHB-201ENST00000377707 SPAARA0A1B0GVQ0 90 aa17.1■□□□□ 0.33
SHB-201ENST00000377707 TFF1P04155 84 aa17.1■□□□□ 0.33
SHB-201ENST00000377707 RPS16P62249 146 aaKnown RBP17.1■□□□□ 0.33
SHB-201ENST00000377707 TRIP6Q15654 476 aaKnown RBP17.1■□□□□ 0.33
SHB-201ENST00000377707 MPV17LQ2QL34 196 aa17.1■□□□□ 0.33
SHB-201ENST00000377707 VPS25Q9BRG1 176 aa17.1■□□□□ 0.33
SHB-201ENST00000377707 LRFN3Q9BTN0 628 aa17.1■□□□□ 0.33
SHB-201ENST00000377707 ZNF703Q9H7S9 590 aaPredicted RBP17.1■□□□□ 0.33
SHB-201ENST00000377707 GVINP1Q7Z2Y8 2422 aa17.1■□□□□ 0.33
SHB-201ENST00000377707 SIRPB1O00241 398 aa17.1■□□□□ 0.33
SHB-201ENST00000377707 MT-CO3P00414 261 aa17.1■□□□□ 0.33
SHB-201ENST00000377707 UCP1P25874 307 aa17.1■□□□□ 0.33
SHB-201ENST00000377707 KLF3P57682 345 aaPredicted RBP17.1■□□□□ 0.33
SHB-201ENST00000377707 DLK1P80370 383 aa17.1■□□□□ 0.33
SHB-201ENST00000377707 ICAM4Q14773 271 aa17.1■□□□□ 0.33
SHB-201ENST00000377707 RHEBQ15382 184 aa17.1■□□□□ 0.33
SHB-201ENST00000377707 ATP6V1FQ16864 119 aa17.1■□□□□ 0.33
SHB-201ENST00000377707 HES3Q5TGS1 186 aa17.1■□□□□ 0.33
SHB-201ENST00000377707 CMTM1Q8IZ96 169 aa17.1■□□□□ 0.33
SHB-201ENST00000377707 RNF115Q9Y4L5 304 aa17.1■□□□□ 0.33
SHB-201ENST00000377707 ZFP92A6NM28 416 aa17.09■□□□□ 0.33
SHB-201ENST00000377707 SERPINA7P05543 415 aa17.09■□□□□ 0.33
SHB-201ENST00000377707 SRP19P09132 144 aaKnown RBP17.09■□□□□ 0.33
SHB-201ENST00000377707 UBE2KP61086 200 aa17.09■□□□□ 0.33
SHB-201ENST00000377707 SELENOTP62341 195 aa17.09■□□□□ 0.33
SHB-201ENST00000377707 ARL16Q0P5N6 197 aa17.09■□□□□ 0.33
SHB-201ENST00000377707 LCN15Q6UWW0 184 aa17.09■□□□□ 0.33
SHB-201ENST00000377707 HIST1H2AAQ96QV6 131 aa17.09■□□□□ 0.33
SHB-201ENST00000377707 GNG13Q9P2W3 67 aa17.09■□□□□ 0.33
SHB-201ENST00000377707 TGIF2-C20orf24A0A0A6YYL0 155 aa17.09■□□□□ 0.33
SHB-201ENST00000377707 C9orf172C9J069 976 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms