RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 TXNL4BQ9NX01 149 aaKnown RBP13.29□□□□□ -0.28
HMGN4-201ENST00000377575 RRP15Q9Y3B9 282 aaKnown RBP13.29□□□□□ -0.28
HMGN4-201ENST00000377575 METTL21EPA6NDL7 271 aa13.28□□□□□ -0.28
HMGN4-201ENST00000377575 CD33P20138 364 aa13.28□□□□□ -0.28
HMGN4-201ENST00000377575 SOX6P35712 828 aa13.28□□□□□ -0.28
HMGN4-201ENST00000377575 F2RL1P55085 397 aa13.28□□□□□ -0.28
HMGN4-201ENST00000377575 PLA2G7Q13093 441 aa13.28□□□□□ -0.28
HMGN4-201ENST00000377575 OR10R2Q8NGX6 335 aa13.28□□□□□ -0.28
HMGN4-201ENST00000377575 PTX4Q96A99 478 aa13.28□□□□□ -0.28
HMGN4-201ENST00000377575 LINC00527Q9UJ94 153 aa13.28□□□□□ -0.28
HMGN4-201ENST00000377575 SSR3Q9UNL2 185 aa13.28□□□□□ -0.28
HMGN4-201ENST00000377575 NOTOA8MTQ0 251 aa13.27□□□□□ -0.29
HMGN4-201ENST00000377575 TRDCB7Z8K6 153 aa13.27□□□□□ -0.29
HMGN4-201ENST00000377575 CEACAM6P40199 344 aa13.27□□□□□ -0.29
HMGN4-201ENST00000377575 ACTBP60709 375 aa13.27□□□□□ -0.29
HMGN4-201ENST00000377575 RPL23AP62750 156 aaKnown RBP13.27□□□□□ -0.29
HMGN4-201ENST00000377575 BEAN1Q3B7T3 259 aa13.27□□□□□ -0.29
HMGN4-201ENST00000377575 KCTD21Q4G0X4 260 aa13.27□□□□□ -0.29
HMGN4-201ENST00000377575 TPRA1Q86W33 373 aa13.27□□□□□ -0.29
HMGN4-201ENST00000377575 PHF21AQ96BD5 680 aa13.27□□□□□ -0.29
HMGN4-201ENST00000377575 ZNF251Q9BRH9 671 aa13.27□□□□□ -0.29
HMGN4-201ENST00000377575 OR1A1Q9P1Q5 309 aa13.27□□□□□ -0.29
HMGN4-201ENST00000377575 A0A0B4J203 849 aa13.26□□□□□ -0.29
HMGN4-201ENST00000377575 OR5H14A6NHG9 310 aa13.26□□□□□ -0.29
HMGN4-201ENST00000377575 SCTP09683 121 aa13.26□□□□□ -0.29
HMGN4-201ENST00000377575 HIST1H1DP16402 221 aaKnown RBP13.26□□□□□ -0.29
HMGN4-201ENST00000377575 SLC6A1P30531 599 aa13.26□□□□□ -0.29
HMGN4-201ENST00000377575 SERPINB10P48595 397 aa13.26□□□□□ -0.29
HMGN4-201ENST00000377575 KIR2DS1Q14954 304 aa13.26□□□□□ -0.29
HMGN4-201ENST00000377575 ARL6IP1Q15041 203 aa13.26□□□□□ -0.29
HMGN4-201ENST00000377575 MOGAT2Q3SYC2 334 aa13.26□□□□□ -0.29
HMGN4-201ENST00000377575 KPRPQ5T749 579 aaPredicted RBP13.26□□□□□ -0.29
HMGN4-201ENST00000377575 TEX38Q6PEX7 206 aa13.26□□□□□ -0.29
HMGN4-201ENST00000377575 NR2C2APQ86WQ0 139 aa13.26□□□□□ -0.29
HMGN4-201ENST00000377575 OR4A4PQ8NGN8 299 aa13.26□□□□□ -0.29
HMGN4-201ENST00000377575 ZFP57Q9NU63 452 aa13.26□□□□□ -0.29
HMGN4-201ENST00000377575 KIAA1456Q9P272 454 aa13.26□□□□□ -0.29
HMGN4-201ENST00000377575 ZNF107Q9UII5 783 aaPredicted RBP13.26□□□□□ -0.29
HMGN4-201ENST00000377575 KCNK7Q9Y2U2 307 aa13.26□□□□□ -0.29
HMGN4-201ENST00000377575 A0A075B6Q4 140 aa13.25□□□□□ -0.29
HMGN4-201ENST00000377575 SMIM30A4D0T7 59 aa13.25□□□□□ -0.29
HMGN4-201ENST00000377575 LINC01548A6NM66 108 aa13.25□□□□□ -0.29
HMGN4-201ENST00000377575 NUDT19A8MXV4 375 aa13.25□□□□□ -0.29
HMGN4-201ENST00000377575 RAB27BO00194 218 aa13.25□□□□□ -0.29
HMGN4-201ENST00000377575 MFNGO00587 321 aa13.25□□□□□ -0.29
HMGN4-201ENST00000377575 NBR2O15453 112 aa13.25□□□□□ -0.29
HMGN4-201ENST00000377575 FCGR3AP08637 254 aa13.25□□□□□ -0.29
HMGN4-201ENST00000377575 SLC2A2P11168 524 aaPredicted RBP13.25□□□□□ -0.29
HMGN4-201ENST00000377575 GNB3P16520 340 aa13.25□□□□□ -0.29
HMGN4-201ENST00000377575 VDAC1P21796 283 aa13.25□□□□□ -0.29
HMGN4-201ENST00000377575 PNLIPRP3Q17RR3 467 aa13.25□□□□□ -0.29
HMGN4-201ENST00000377575 RPL39P5Q59GN2 51 aa13.25□□□□□ -0.29
HMGN4-201ENST00000377575 FAM131AQ6UXB0 335 aa13.25□□□□□ -0.29
HMGN4-201ENST00000377575 ABHD14BQ96IU4 210 aa13.25□□□□□ -0.29
HMGN4-201ENST00000377575 KCTD7Q96MP8 289 aa13.25□□□□□ -0.29
HMGN4-201ENST00000377575 HSPB9Q9BQS6 159 aa13.25□□□□□ -0.29
HMGN4-201ENST00000377575 AGMATQ9BSE5 352 aa13.25□□□□□ -0.29
HMGN4-201ENST00000377575 PARP12Q9H0J9 701 aaKnown RBP13.25□□□□□ -0.29
HMGN4-201ENST00000377575 C11orf54Q9H0W9 315 aaPredicted RBP13.25□□□□□ -0.29
HMGN4-201ENST00000377575 ATG5Q9H1Y0 275 aa13.25□□□□□ -0.29
HMGN4-201ENST00000377575 ZNF221Q9UK13 617 aa13.25□□□□□ -0.29
HMGN4-201ENST00000377575 ZNF580Q9UK33 172 aa13.25□□□□□ -0.29
HMGN4-201ENST00000377575 NOTCH3Q9UM47 2321 aa13.25□□□□□ -0.29
HMGN4-201ENST00000377575 FABP7O15540 132 aa13.24□□□□□ -0.29
HMGN4-201ENST00000377575 SCGNO76038 276 aa13.24□□□□□ -0.29
HMGN4-201ENST00000377575 DIRAS3O95661 229 aa13.24□□□□□ -0.29
HMGN4-201ENST00000377575 HLA-DRB1P01911 266 aa13.24□□□□□ -0.29
HMGN4-201ENST00000377575 OR5H8P0DN80 308 aa13.24□□□□□ -0.29
HMGN4-201ENST00000377575 MC5RP33032 325 aa13.24□□□□□ -0.29
HMGN4-201ENST00000377575 ARFRP1Q13795 201 aa13.24□□□□□ -0.29
HMGN4-201ENST00000377575 NEDD8Q15843 81 aa13.24□□□□□ -0.29
HMGN4-201ENST00000377575 CXorf66Q5JRM2 361 aaPredicted RBP13.24□□□□□ -0.29
HMGN4-201ENST00000377575 RBMXL1Q96E39 390 aaKnown RBP13.24□□□□□ -0.29
HMGN4-201ENST00000377575 CABLES2Q9BTV7 478 aa13.24□□□□□ -0.29
HMGN4-201ENST00000377575 CENPOQ9BU64 300 aa13.24□□□□□ -0.29
HMGN4-201ENST00000377575 OR51E2Q9H255 320 aa13.24□□□□□ -0.29
HMGN4-201ENST00000377575 RDH8Q9NYR8 311 aa13.24□□□□□ -0.29
HMGN4-201ENST00000377575 IGKV1-6A0A0C4DH72 117 aa13.23□□□□□ -0.29
HMGN4-201ENST00000377575 RBBP9O75884 186 aa13.23□□□□□ -0.29
HMGN4-201ENST00000377575 IGF1P05019 195 aa13.23□□□□□ -0.29
HMGN4-201ENST00000377575 CT45A6P0DMU7 189 aa13.23□□□□□ -0.29
HMGN4-201ENST00000377575 CT45A5P0DMU8 189 aa13.23□□□□□ -0.29
HMGN4-201ENST00000377575 CT45A7P0DMV0 189 aa13.23□□□□□ -0.29
HMGN4-201ENST00000377575 TALDO1P37837 337 aa13.23□□□□□ -0.29
HMGN4-201ENST00000377575 FOXE3Q13461 319 aa13.23□□□□□ -0.29
HMGN4-201ENST00000377575 OXLD1Q5BKU9 147 aa13.23□□□□□ -0.29
HMGN4-201ENST00000377575 SFXN4Q6P4A7 337 aa13.23□□□□□ -0.29
HMGN4-201ENST00000377575 REC114Q7Z4M0 266 aa13.23□□□□□ -0.29
HMGN4-201ENST00000377575 KLHL30-AS1Q8NEE0 82 aa13.23□□□□□ -0.29
HMGN4-201ENST00000377575 WFDC9Q8NEX5 89 aa13.23□□□□□ -0.29
HMGN4-201ENST00000377575 NPBQ8NG41 125 aa13.23□□□□□ -0.29
HMGN4-201ENST00000377575 OR10J5Q8NHC4 309 aa13.23□□□□□ -0.29
HMGN4-201ENST00000377575 RCC1LQ96I51 464 aaKnown RBP13.23□□□□□ -0.29
HMGN4-201ENST00000377575 CHCHD6Q9BRQ6 235 aa13.23□□□□□ -0.29
HMGN4-201ENST00000377575 DAPK2Q9UIK4 370 aa13.23□□□□□ -0.29
HMGN4-201ENST00000377575 WASHC3Q9Y3C0 194 aa13.23□□□□□ -0.29
HMGN4-201ENST00000377575 PRKDCP78527 4128 aaKnown RBP13.23□□□□□ -0.29
HMGN4-201ENST00000377575 LOC100506127A0A0U1RQW1 187 aa13.22□□□□□ -0.29
HMGN4-201ENST00000377575 H0YJW9 148 aa13.22□□□□□ -0.29
HMGN4-201ENST00000377575 H7C2Y5 167 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms