RNA–Protein interactions for RNA: ENST00000377342.9

CBWD3-202, Transcript of COBW domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CBWD3, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-202ENST00000377342 OR8U1Q8NH10 309 aa17.29■□□□□ 0.36
CBWD3-202ENST00000377342 C5orf30Q96GV9 206 aa17.29■□□□□ 0.36
CBWD3-202ENST00000377342 ABHD14BQ96IU4 210 aa17.29■□□□□ 0.36
CBWD3-202ENST00000377342 PALMDQ9NP74 551 aa17.29■□□□□ 0.36
CBWD3-202ENST00000377342 NAV3Q8IVL0 2385 aa17.29■□□□□ 0.36
CBWD3-202ENST00000377342 HIVEP2P31629 2446 aa17.29■□□□□ 0.36
CBWD3-202ENST00000377342 A8MV72 311 aaPredicted RBP17.29■□□□□ 0.36
CBWD3-202ENST00000377342 TMEM17Q86X19 198 aa17.29■□□□□ 0.36
CBWD3-202ENST00000377342 PRRT1Q99946 306 aa17.29■□□□□ 0.36
CBWD3-202ENST00000377342 OR2D2Q9H210 308 aa17.29■□□□□ 0.36
CBWD3-202ENST00000377342 NAP1L6A6NFF2 107 aa17.28■□□□□ 0.36
CBWD3-202ENST00000377342 TOR1AO14656 332 aa17.28■□□□□ 0.36
CBWD3-202ENST00000377342 IGLV2-14P01704 120 aa17.28■□□□□ 0.36
CBWD3-202ENST00000377342 HERV-K104P61576 105 aa17.28■□□□□ 0.36
CBWD3-202ENST00000377342 GPR157Q5UAW9 335 aa17.28■□□□□ 0.36
CBWD3-202ENST00000377342 BRD3OSQ6XYD6 125 aa17.28■□□□□ 0.36
CBWD3-202ENST00000377342 IDO2Q6ZQW0 420 aa17.28■□□□□ 0.36
CBWD3-202ENST00000377342 LHFPL4Q7Z7J7 247 aa17.28■□□□□ 0.36
CBWD3-202ENST00000377342 AJUBAQ96IF1 538 aa17.28■□□□□ 0.36
CBWD3-202ENST00000377342 RNF150Q9ULK6 438 aa17.28■□□□□ 0.36
CBWD3-202ENST00000377342 SAA2-SAA4A0A096LPE2 208 aa17.27■□□□□ 0.36
CBWD3-202ENST00000377342 BUB1B-PAK6H3BSN5 160 aa17.27■□□□□ 0.36
CBWD3-202ENST00000377342 NPFFO15130 113 aa17.27■□□□□ 0.36
CBWD3-202ENST00000377342 SAA2P0DJI9 122 aaPredicted RBP17.27■□□□□ 0.36
CBWD3-202ENST00000377342 SAA4P35542 130 aa17.27■□□□□ 0.36
CBWD3-202ENST00000377342 RAB7AP51149 207 aa17.27■□□□□ 0.36
CBWD3-202ENST00000377342 CCR6P51684 374 aa17.27■□□□□ 0.36
CBWD3-202ENST00000377342 LUMP51884 338 aaPredicted RBP17.27■□□□□ 0.36
CBWD3-202ENST00000377342 ZNF137PP52743 207 aa17.27■□□□□ 0.36
CBWD3-202ENST00000377342 DCTN2Q13561 401 aaKnown RBP17.27■□□□□ 0.36
CBWD3-202ENST00000377342 FAM120AOSQ5T036 256 aa17.27■□□□□ 0.36
CBWD3-202ENST00000377342 CLEC9AQ6UXN8 241 aa17.27■□□□□ 0.36
CBWD3-202ENST00000377342 IL17RELQ6ZVW7 336 aa17.27■□□□□ 0.36
CBWD3-202ENST00000377342 LYG1Q8N1E2 194 aa17.27■□□□□ 0.36
CBWD3-202ENST00000377342 OR10X1Q8NGY0 326 aa17.27■□□□□ 0.36
CBWD3-202ENST00000377342 TERB2Q8NHR7 220 aa17.27■□□□□ 0.36
CBWD3-202ENST00000377342 FAM216AQ8WUB2 273 aa17.27■□□□□ 0.36
CBWD3-202ENST00000377342 C17orf50Q8WW18 174 aa17.27■□□□□ 0.36
CBWD3-202ENST00000377342 TOMM40LQ969M1 308 aa17.27■□□□□ 0.36
CBWD3-202ENST00000377342 GSX1Q9H4S2 264 aaPredicted RBP17.27■□□□□ 0.36
CBWD3-202ENST00000377342 LY6LH3BQJ8 138 aa17.26■□□□□ 0.35
CBWD3-202ENST00000377342 PRRX1P54821 245 aa17.26■□□□□ 0.35
CBWD3-202ENST00000377342 DIAPH2-AS1Q14236 149 aa17.26■□□□□ 0.35
CBWD3-202ENST00000377342 SECTM1Q8WVN6 248 aa17.26■□□□□ 0.35
CBWD3-202ENST00000377342 ST6GALNAC6Q969X2 333 aa17.26■□□□□ 0.35
CBWD3-202ENST00000377342 ZNF251Q9BRH9 671 aa17.26■□□□□ 0.35
CBWD3-202ENST00000377342 CENPXA8MT69 81 aa17.26■□□□□ 0.35
CBWD3-202ENST00000377342 PROP1O75360 226 aa17.26■□□□□ 0.35
CBWD3-202ENST00000377342 BAMBIQ13145 260 aa17.26■□□□□ 0.35
CBWD3-202ENST00000377342 MIDNQ504T8 468 aa17.26■□□□□ 0.35
CBWD3-202ENST00000377342 CREB3L1Q96BA8 519 aa17.26■□□□□ 0.35
CBWD3-202ENST00000377342 SLC5A7Q9GZV3 580 aa17.26■□□□□ 0.35
CBWD3-202ENST00000377342 SCP2D1Q9UJQ7 156 aa17.26■□□□□ 0.35
CBWD3-202ENST00000377342 SOX21Q9Y651 276 aaPredicted RBP17.26■□□□□ 0.35
CBWD3-202ENST00000377342 RPL39P5Q59GN2 51 aa17.25■□□□□ 0.35
CBWD3-202ENST00000377342 ZNF645Q8N7E2 425 aa17.25■□□□□ 0.35
CBWD3-202ENST00000377342 NANPQ8TBE9 248 aa17.25■□□□□ 0.35
CBWD3-202ENST00000377342 MARCH1Q8TCQ1 289 aa17.25■□□□□ 0.35
CBWD3-202ENST00000377342 CCL28Q9NRJ3 127 aa17.25■□□□□ 0.35
CBWD3-202ENST00000377342 TMEM160Q9NX00 188 aa17.25■□□□□ 0.35
CBWD3-202ENST00000377342 SDHAF2Q9NX18 166 aa17.25■□□□□ 0.35
CBWD3-202ENST00000377342 AMMECR1Q9Y4X0 333 aaPredicted RBP17.25■□□□□ 0.35
CBWD3-202ENST00000377342 RBM7Q9Y580 266 aaKnown RBP17.25■□□□□ 0.35
CBWD3-202ENST00000377342 HTR1DP28221 377 aa17.24■□□□□ 0.35
CBWD3-202ENST00000377342 SLC6A1P30531 599 aa17.24■□□□□ 0.35
CBWD3-202ENST00000377342 GNRHRP30968 328 aa17.24■□□□□ 0.35
CBWD3-202ENST00000377342 UCP3P55916 312 aa17.24■□□□□ 0.35
CBWD3-202ENST00000377342 ZNF818PQ6ZRF7 136 aa17.24■□□□□ 0.35
CBWD3-202ENST00000377342 ZNF833PQ6ZTB9 187 aa17.24■□□□□ 0.35
CBWD3-202ENST00000377342 DYNAPQ8N1N2 210 aa17.24■□□□□ 0.35
CBWD3-202ENST00000377342 DRAM1Q8N682 238 aa17.24■□□□□ 0.35
CBWD3-202ENST00000377342 TBL2Q9Y4P3 447 aaKnown RBP17.24■□□□□ 0.35
CBWD3-202ENST00000377342 RAB29O14966 203 aa17.23■□□□□ 0.35
CBWD3-202ENST00000377342 PAX6P26367 422 aa17.23■□□□□ 0.35
CBWD3-202ENST00000377342 GPR12P47775 334 aa17.23■□□□□ 0.35
CBWD3-202ENST00000377342 PLA1AQ53H76 456 aa17.23■□□□□ 0.35
CBWD3-202ENST00000377342 MINOS1Q5TGZ0 78 aa17.23■□□□□ 0.35
CBWD3-202ENST00000377342 POC5Q8NA72 575 aa17.23■□□□□ 0.35
CBWD3-202ENST00000377342 RSRP1Q9BUV0 290 aa17.23■□□□□ 0.35
CBWD3-202ENST00000377342 PIPOXQ9P0Z9 390 aa17.23■□□□□ 0.35
CBWD3-202ENST00000377342 NUP50Q9UKX7 468 aa17.23■□□□□ 0.35
CBWD3-202ENST00000377342 VSIG4Q9Y279 399 aa17.23■□□□□ 0.35
CBWD3-202ENST00000377342 MINOS1-NBL1R4GNA1 71 aa17.23■□□□□ 0.35
CBWD3-202ENST00000377342 FN1P02751 2386 aaKnown RBP17.23■□□□□ 0.35
CBWD3-202ENST00000377342 HSD17B6O14756 317 aa17.23■□□□□ 0.35
CBWD3-202ENST00000377342 DEFA1P59665 94 aa17.23■□□□□ 0.35
CBWD3-202ENST00000377342 DEFA3P59666 94 aa17.23■□□□□ 0.35
CBWD3-202ENST00000377342 EIF4EBP1Q13541 118 aaPredicted RBP17.23■□□□□ 0.35
CBWD3-202ENST00000377342 TPTE2P1Q5T6R2 138 aa17.23■□□□□ 0.35
CBWD3-202ENST00000377342 Q71RC1 249 aaPredicted RBP17.23■□□□□ 0.35
CBWD3-202ENST00000377342 DPM3Q9P2X0 92 aa17.23■□□□□ 0.35
CBWD3-202ENST00000377342 TEP1Q99973 2627 aaKnown RBP17.22■□□□□ 0.35
CBWD3-202ENST00000377342 A0A0U1RQK1 487 aa17.22■□□□□ 0.35
CBWD3-202ENST00000377342 NDUFB6O95139 128 aa17.22■□□□□ 0.35
CBWD3-202ENST00000377342 PI3P19957 117 aa17.22■□□□□ 0.35
CBWD3-202ENST00000377342 EPHA1P21709 976 aa17.22■□□□□ 0.35
CBWD3-202ENST00000377342 REG1BP48304 166 aa17.22■□□□□ 0.35
CBWD3-202ENST00000377342 RBMS2Q15434 407 aaKnown RBP17.22■□□□□ 0.35
CBWD3-202ENST00000377342 SURF2Q15527 256 aaPredicted RBP17.22■□□□□ 0.35
CBWD3-202ENST00000377342 MSMO1Q15800 293 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms