RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 C7orf77A4D0Y5 90 aa8.03□□□□□ -1.12
TRIM39-202ENST00000376659 WNT9BO14905 357 aa8.03□□□□□ -1.12
TRIM39-202ENST00000376659 RAMP3O60896 148 aa8.03□□□□□ -1.12
TRIM39-202ENST00000376659 PROP1O75360 226 aa8.03□□□□□ -1.12
TRIM39-202ENST00000376659 RHEBQ15382 184 aa8.03□□□□□ -1.12
TRIM39-202ENST00000376659 TMEM164Q5U3C3 297 aa8.03□□□□□ -1.12
TRIM39-202ENST00000376659 SLC35E4Q6ICL7 350 aa8.03□□□□□ -1.12
TRIM39-202ENST00000376659 ACP7Q6ZNF0 438 aa8.03□□□□□ -1.12
TRIM39-202ENST00000376659 FAM169BQ8N8A8 192 aa8.03□□□□□ -1.12
TRIM39-202ENST00000376659 NANOS1Q8WY41 292 aaKnown RBP8.03□□□□□ -1.12
TRIM39-202ENST00000376659 NEU1Q99519 415 aa8.03□□□□□ -1.12
TRIM39-202ENST00000376659 UNKLQ9H9P5 680 aaKnown RBP8.03□□□□□ -1.12
TRIM39-202ENST00000376659 HSPB7Q9UBY9 170 aa8.03□□□□□ -1.12
TRIM39-202ENST00000376659 OR14J1Q9UGF5 321 aa8.03□□□□□ -1.12
TRIM39-202ENST00000376659 ZDBF2Q9HCK1 2354 aa8.03□□□□□ -1.12
TRIM39-202ENST00000376659 RAB5BP61020 215 aa8.03□□□□□ -1.12
TRIM39-202ENST00000376659 GNMTQ14749 295 aa8.03□□□□□ -1.12
TRIM39-202ENST00000376659 FAM90A2PQ658T7 463 aa8.03□□□□□ -1.12
TRIM39-202ENST00000376659 VASH2Q86V25 355 aa8.03□□□□□ -1.12
TRIM39-202ENST00000376659 C1QL4Q86Z23 238 aa8.03□□□□□ -1.12
TRIM39-202ENST00000376659 ZNF645Q8N7E2 425 aa8.03□□□□□ -1.12
TRIM39-202ENST00000376659 OR2G3Q8NGZ4 309 aa8.03□□□□□ -1.12
TRIM39-202ENST00000376659 MUCL1Q96DR8 90 aa8.03□□□□□ -1.12
TRIM39-202ENST00000376659 UBE2J1Q9Y385 318 aaPredicted RBP8.03□□□□□ -1.12
TRIM39-202ENST00000376659 IGHV1-18A0A0C4DH31 117 aa8.02□□□□□ -1.13
TRIM39-202ENST00000376659 C12orf77C9JDV5 145 aa8.02□□□□□ -1.13
TRIM39-202ENST00000376659 TSPAN15O95858 294 aa8.02□□□□□ -1.13
TRIM39-202ENST00000376659 TFF1P04155 84 aa8.02□□□□□ -1.13
TRIM39-202ENST00000376659 CD200P41217 278 aa8.02□□□□□ -1.13
TRIM39-202ENST00000376659 RAB4BP61018 213 aa8.02□□□□□ -1.13
TRIM39-202ENST00000376659 LFNGQ8NES3 379 aa8.02□□□□□ -1.13
TRIM39-202ENST00000376659 Q8TCH9 128 aa8.02□□□□□ -1.13
TRIM39-202ENST00000376659 MBD3L1Q8WWY6 194 aa8.02□□□□□ -1.13
TRIM39-202ENST00000376659 TAAR6Q96RI8 345 aa8.02□□□□□ -1.13
TRIM39-202ENST00000376659 OR51B6Q9H340 312 aa8.02□□□□□ -1.13
TRIM39-202ENST00000376659 PRR14LQ5THK1 2151 aa8.02□□□□□ -1.13
TRIM39-202ENST00000376659 LOC102723971A0A1B0GUV8 181 aa8.02□□□□□ -1.13
TRIM39-202ENST00000376659 CDIPTO14735 213 aa8.02□□□□□ -1.13
TRIM39-202ENST00000376659 NKX2-8O15522 239 aa8.02□□□□□ -1.13
TRIM39-202ENST00000376659 ZNF737O75373 536 aa8.02□□□□□ -1.13
TRIM39-202ENST00000376659 LYZL6O75951 148 aa8.02□□□□□ -1.13
TRIM39-202ENST00000376659 SCAF4O95104 1147 aaKnown RBP8.02□□□□□ -1.13
TRIM39-202ENST00000376659 HAND1O96004 215 aa8.02□□□□□ -1.13
TRIM39-202ENST00000376659 IGKV1D-33P01593 117 aa8.02□□□□□ -1.13
TRIM39-202ENST00000376659 IGKV1-33P01594 117 aa8.02□□□□□ -1.13
TRIM39-202ENST00000376659 PPT1P50897 306 aa8.02□□□□□ -1.13
TRIM39-202ENST00000376659 PLP2Q04941 152 aa8.02□□□□□ -1.13
TRIM39-202ENST00000376659 TRIP6Q15654 476 aaKnown RBP8.02□□□□□ -1.13
TRIM39-202ENST00000376659 LRRC75BQ2VPJ9 315 aa8.02□□□□□ -1.13
TRIM39-202ENST00000376659 SPRNQ5BIV9 151 aa8.02□□□□□ -1.13
TRIM39-202ENST00000376659 PSMG3Q9BT73 122 aaPredicted RBP8.02□□□□□ -1.13
TRIM39-202ENST00000376659 SLC25A31Q9H0C2 315 aa8.02□□□□□ -1.13
TRIM39-202ENST00000376659 SMCO4Q9NRQ5 59 aa8.02□□□□□ -1.13
TRIM39-202ENST00000376659 MMP24Q9Y5R2 645 aa8.02□□□□□ -1.13
TRIM39-202ENST00000376659 A0A087WWC5 75 aa8.02□□□□□ -1.13
TRIM39-202ENST00000376659 BTBD17A6NE02 478 aa8.02□□□□□ -1.13
TRIM39-202ENST00000376659 RBFOX3A6NFN3 312 aa8.02□□□□□ -1.13
TRIM39-202ENST00000376659 C1orf196B1AJZ1 125 aa8.02□□□□□ -1.13
TRIM39-202ENST00000376659 PRSS46E5RG02 174 aa8.02□□□□□ -1.13
TRIM39-202ENST00000376659 SIRPB1O00241 398 aa8.02□□□□□ -1.13
TRIM39-202ENST00000376659 CST7O76096 145 aa8.02□□□□□ -1.13
TRIM39-202ENST00000376659 CAMLGP49069 296 aa8.02□□□□□ -1.13
TRIM39-202ENST00000376659 RAB2AP61019 212 aa8.02□□□□□ -1.13
TRIM39-202ENST00000376659 PEA15Q15121 130 aa8.02□□□□□ -1.13
TRIM39-202ENST00000376659 HEPN1Q6WQI6 88 aa8.02□□□□□ -1.13
TRIM39-202ENST00000376659 CD177Q8N6Q3 437 aa8.02□□□□□ -1.13
TRIM39-202ENST00000376659 OR4C12Q96R67 309 aa8.02□□□□□ -1.13
TRIM39-202ENST00000376659 ZNF71Q9NQZ8 489 aaPredicted RBP8.02□□□□□ -1.13
TRIM39-202ENST00000376659 NXPH3O95157 252 aa8.01□□□□□ -1.13
TRIM39-202ENST00000376659 HSPB1P04792 205 aaKnown RBP8.01□□□□□ -1.13
TRIM39-202ENST00000376659 CECR9P0C854 216 aa8.01□□□□□ -1.13
TRIM39-202ENST00000376659 AKR1C3P42330 323 aa8.01□□□□□ -1.13
TRIM39-202ENST00000376659 TMEM267Q0VDI3 215 aaPredicted RBP8.01□□□□□ -1.13
TRIM39-202ENST00000376659 FABP9Q0Z7S8 132 aa8.01□□□□□ -1.13
TRIM39-202ENST00000376659 C1orf229Q6ZS94 237 aaPredicted RBP8.01□□□□□ -1.13
TRIM39-202ENST00000376659 TMEM178AQ8NBL3 297 aa8.01□□□□□ -1.13
TRIM39-202ENST00000376659 OR1L1Q8NH94 360 aa8.01□□□□□ -1.13
TRIM39-202ENST00000376659 STARD4Q96DR4 205 aa8.01□□□□□ -1.13
TRIM39-202ENST00000376659 RAB40CQ96S21 281 aa8.01□□□□□ -1.13
TRIM39-202ENST00000376659 POLDIP2Q9Y2S7 368 aa8.01□□□□□ -1.13
TRIM39-202ENST00000376659 DSCAMO60469 2012 aa8.01□□□□□ -1.13
TRIM39-202ENST00000376659 HCFC1P51610 2035 aa8.01□□□□□ -1.13
TRIM39-202ENST00000376659 A0A1W2PPH5 198 aa8.01□□□□□ -1.13
TRIM39-202ENST00000376659 MBD3L4A6NDZ8 208 aaPredicted RBP8.01□□□□□ -1.13
TRIM39-202ENST00000376659 MBD3L3A6NE82 208 aaPredicted RBP8.01□□□□□ -1.13
TRIM39-202ENST00000376659 MBD3L5A6NJ08 208 aaPredicted RBP8.01□□□□□ -1.13
TRIM39-202ENST00000376659 FAM90A26D6RGX4 464 aa8.01□□□□□ -1.13
TRIM39-202ENST00000376659 ETFRF1Q6IPR1 90 aa8.01□□□□□ -1.13
TRIM39-202ENST00000376659 MBD3L2Q8NHZ7 208 aaPredicted RBP8.01□□□□□ -1.13
TRIM39-202ENST00000376659 FAM213BQ8TBF2 198 aa8.01□□□□□ -1.13
TRIM39-202ENST00000376659 KCNJ16Q9NPI9 418 aa8.01□□□□□ -1.13
TRIM39-202ENST00000376659 IGHV2OR16-5A0A0B4J2B6 119 aa8□□□□□ -1.13
TRIM39-202ENST00000376659 IFITM10A6NMD0 228 aa8□□□□□ -1.13
TRIM39-202ENST00000376659 GALR2O43603 387 aaPredicted RBP8□□□□□ -1.13
TRIM39-202ENST00000376659 LHBP01229 141 aa8□□□□□ -1.13
TRIM39-202ENST00000376659 CGB3P0DN86 165 aa8□□□□□ -1.13
TRIM39-202ENST00000376659 CGB7P0DN87 165 aa8□□□□□ -1.13
TRIM39-202ENST00000376659 EGR1P18146 543 aa8□□□□□ -1.13
TRIM39-202ENST00000376659 CMTM1Q8IZ96 169 aa8□□□□□ -1.13
TRIM39-202ENST00000376659 MISP3Q96FF7 219 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms