RNA–Protein interactions for RNA: ENST00000376561.7

CTTN-203, Transcript of cortactin, humanhuman

TSL 1 (best) BASIC

Gene CTTN, Length 2,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-203ENST00000376561 RAB9BQ9NP90 201 aa14.65□□□□□ -0.06
CTTN-203ENST00000376561 SLC25A10Q9UBX3 287 aaPredicted RBP14.65□□□□□ -0.06
CTTN-203ENST00000376561 PSG11Q9UQ72 335 aa14.65□□□□□ -0.06
CTTN-203ENST00000376561 KBTBD11-OT1A0A1B0GTJ5 212 aa14.64□□□□□ -0.07
CTTN-203ENST00000376561 CLEC18AA5D8T8 446 aa14.64□□□□□ -0.07
CTTN-203ENST00000376561 TNFRSF13BO14836 293 aaPredicted RBP14.64□□□□□ -0.07
CTTN-203ENST00000376561 SPDEFO95238 335 aa14.64□□□□□ -0.07
CTTN-203ENST00000376561 ZNF585BQ52M93 769 aa14.64□□□□□ -0.07
CTTN-203ENST00000376561 CLEC18CQ8NCF0 446 aa14.64□□□□□ -0.07
CTTN-203ENST00000376561 ZFP57Q9NU63 452 aa14.64□□□□□ -0.07
CTTN-203ENST00000376561 CLN8Q9UBY8 286 aa14.64□□□□□ -0.07
CTTN-203ENST00000376561 ST8SIA3O43173 380 aa14.64□□□□□ -0.07
CTTN-203ENST00000376561 IGKV1-39P01597 117 aa14.64□□□□□ -0.07
CTTN-203ENST00000376561 IGKV1D-39P04432 117 aa14.64□□□□□ -0.07
CTTN-203ENST00000376561 NDUFB7P17568 137 aa14.64□□□□□ -0.07
CTTN-203ENST00000376561 HFEQ30201 348 aa14.64□□□□□ -0.07
CTTN-203ENST00000376561 ARPC5LQ9BPX5 153 aa14.64□□□□□ -0.07
CTTN-203ENST00000376561 SDHAF2Q9NX18 166 aa14.64□□□□□ -0.07
CTTN-203ENST00000376561 PPOXP50336 477 aa14.63□□□□□ -0.07
CTTN-203ENST00000376561 RPL30P62888 115 aaKnown RBP14.63□□□□□ -0.07
CTTN-203ENST00000376561 ALKAL2Q6UX46 152 aa14.63□□□□□ -0.07
CTTN-203ENST00000376561 FAM216AQ8WUB2 273 aa14.63□□□□□ -0.07
CTTN-203ENST00000376561 CORO2AQ92828 525 aa14.63□□□□□ -0.07
CTTN-203ENST00000376561 ZNF471Q9BX82 626 aaPredicted RBP14.63□□□□□ -0.07
CTTN-203ENST00000376561 FCN3O75636 299 aa14.62□□□□□ -0.07
CTTN-203ENST00000376561 UBA52P62987 128 aaKnown RBP14.62□□□□□ -0.07
CTTN-203ENST00000376561 THOC7Q6I9Y2 204 aaKnown RBP14.62□□□□□ -0.07
CTTN-203ENST00000376561 ST8SIA2Q92186 375 aa14.62□□□□□ -0.07
CTTN-203ENST00000376561 POMT1Q9Y6A1 747 aa14.62□□□□□ -0.07
CTTN-203ENST00000376561 A0A0G2JRQ6 117 aa14.62□□□□□ -0.07
CTTN-203ENST00000376561 hADV38S2A0JD32 116 aa14.62□□□□□ -0.07
CTTN-203ENST00000376561 ZNF729A6NN14 1252 aaPredicted RBP14.62□□□□□ -0.07
CTTN-203ENST00000376561 E5RGE8 158 aa14.62□□□□□ -0.07
CTTN-203ENST00000376561 F5H0A9 414 aaPredicted RBP14.62□□□□□ -0.07
CTTN-203ENST00000376561 HKR1P10072 659 aa14.62□□□□□ -0.07
CTTN-203ENST00000376561 LYPD2Q6UXB3 125 aa14.62□□□□□ -0.07
CTTN-203ENST00000376561 BTNL3Q6UXE8 466 aa14.62□□□□□ -0.07
CTTN-203ENST00000376561 LINC00574Q9H8X3 128 aa14.62□□□□□ -0.07
CTTN-203ENST00000376561 NSG2Q9Y328 171 aa14.62□□□□□ -0.07
CTTN-203ENST00000376561 USF3Q68DE3 2245 aa14.62□□□□□ -0.07
CTTN-203ENST00000376561 RPS10-NUDT3A0A1W2PQS6 291 aa14.61□□□□□ -0.07
CTTN-203ENST00000376561 NKX2-1P43699 371 aaPredicted RBP14.61□□□□□ -0.07
CTTN-203ENST00000376561 ZNF134P52741 427 aa14.61□□□□□ -0.07
CTTN-203ENST00000376561 CATR1Q13166 79 aa14.61□□□□□ -0.07
CTTN-203ENST00000376561 IGSF10Q6WRI0 2623 aa14.61□□□□□ -0.07
CTTN-203ENST00000376561 GPR146Q96CH1 333 aa14.61□□□□□ -0.07
CTTN-203ENST00000376561 GSX2Q9BZM3 304 aa14.61□□□□□ -0.07
CTTN-203ENST00000376561 GFOD1Q9NXC2 390 aa14.61□□□□□ -0.07
CTTN-203ENST00000376561 LINC00312Q9Y6C7 94 aa14.61□□□□□ -0.07
CTTN-203ENST00000376561 IGHV3-7P01780 117 aa14.61□□□□□ -0.07
CTTN-203ENST00000376561 RPL12P30050 165 aaKnown RBP14.61□□□□□ -0.07
CTTN-203ENST00000376561 Q3ZCU0 254 aa14.61□□□□□ -0.07
CTTN-203ENST00000376561 ZNF66Q6ZN08 573 aa14.61□□□□□ -0.07
CTTN-203ENST00000376561 SCARB1Q8WTV0 552 aa14.61□□□□□ -0.07
CTTN-203ENST00000376561 LSM10Q969L4 123 aaKnown RBP14.61□□□□□ -0.07
CTTN-203ENST00000376561 CBLN4Q9NTU7 201 aa14.61□□□□□ -0.07
CTTN-203ENST00000376561 KAAG1Q9UBP8 84 aa14.61□□□□□ -0.07
CTTN-203ENST00000376561 RCL1Q9Y2P8 373 aaKnown RBP14.61□□□□□ -0.07
CTTN-203ENST00000376561 LYNX1G3V0Z9 82 aa14.6□□□□□ -0.07
CTTN-203ENST00000376561 NDUFB3O43676 98 aa14.6□□□□□ -0.07
CTTN-203ENST00000376561 CLDN1O95832 211 aa14.6□□□□□ -0.07
CTTN-203ENST00000376561 LYNX1P0DP58 116 aa14.6□□□□□ -0.07
CTTN-203ENST00000376561 SLC25A6P12236 298 aa14.6□□□□□ -0.07
CTTN-203ENST00000376561 COL8A2P25067 703 aa14.6□□□□□ -0.07
CTTN-203ENST00000376561 GPR12P47775 334 aa14.6□□□□□ -0.07
CTTN-203ENST00000376561 MEF2CQ06413 473 aaPredicted RBP14.6□□□□□ -0.07
CTTN-203ENST00000376561 CLLU1Q5K131 121 aa14.6□□□□□ -0.07
CTTN-203ENST00000376561 UTF1Q5T230 341 aa14.6□□□□□ -0.07
CTTN-203ENST00000376561 DMBX1Q8NFW5 382 aa14.6□□□□□ -0.07
CTTN-203ENST00000376561 RNASE11Q8TAA1 199 aaKnown RBP14.6□□□□□ -0.07
CTTN-203ENST00000376561 PCNPQ8WW12 178 aaKnown RBP14.6□□□□□ -0.07
CTTN-203ENST00000376561 TCTEX1D2Q8WW35 142 aa14.6□□□□□ -0.07
CTTN-203ENST00000376561 C19orf12Q9NSK7 152 aa14.6□□□□□ -0.07
CTTN-203ENST00000376561 IDI2-AS1Q9NZ38 188 aa14.6□□□□□ -0.07
CTTN-203ENST00000376561 CTSZQ9UBR2 303 aa14.6□□□□□ -0.07
CTTN-203ENST00000376561 CACNA1BQ00975 2339 aa14.6□□□□□ -0.07
CTTN-203ENST00000376561 USP24Q9UPU5 2620 aa14.6□□□□□ -0.07
CTTN-203ENST00000376561 A0A1B0GU03 582 aa14.6□□□□□ -0.07
CTTN-203ENST00000376561 ITGB1BP1O14713 200 aa14.6□□□□□ -0.07
CTTN-203ENST00000376561 NDUFA2O43678 99 aa14.6□□□□□ -0.07
CTTN-203ENST00000376561 RAMP3O60896 148 aa14.6□□□□□ -0.07
CTTN-203ENST00000376561 PROP1O75360 226 aa14.6□□□□□ -0.07
CTTN-203ENST00000376561 IGKV1-5P01602 117 aa14.6□□□□□ -0.07
CTTN-203ENST00000376561 AKR1C2P52895 323 aa14.6□□□□□ -0.07
CTTN-203ENST00000376561 RPL31P62899 125 aaKnown RBP14.6□□□□□ -0.07
CTTN-203ENST00000376561 LRRC10Q5BKY1 277 aa14.6□□□□□ -0.07
CTTN-203ENST00000376561 CXorf66Q5JRM2 361 aaPredicted RBP14.6□□□□□ -0.07
CTTN-203ENST00000376561 LEAP2Q969E1 77 aa14.6□□□□□ -0.07
CTTN-203ENST00000376561 HSD17B10Q99714 261 aaKnown RBP14.6□□□□□ -0.07
CTTN-203ENST00000376561 IFI27L2Q9H2X8 130 aa14.6□□□□□ -0.07
CTTN-203ENST00000376561 PLEKHA2Q9HB19 425 aa14.6□□□□□ -0.07
CTTN-203ENST00000376561 TAS2R3Q9NYW6 316 aa14.6□□□□□ -0.07
CTTN-203ENST00000376561 LINC00473A8K010 186 aa14.59□□□□□ -0.07
CTTN-203ENST00000376561 EPHA1P21709 976 aa14.59□□□□□ -0.07
CTTN-203ENST00000376561 LPAR6P43657 344 aa14.59□□□□□ -0.07
CTTN-203ENST00000376561 BRWD1-AS2P59051 145 aa14.59□□□□□ -0.07
CTTN-203ENST00000376561 RAB14P61106 215 aa14.59□□□□□ -0.07
CTTN-203ENST00000376561 POLR2GP62487 172 aaKnown RBP eCLIP14.59□□□□□ -0.07
CTTN-203ENST00000376561 ID3Q02535 119 aa14.59□□□□□ -0.07
CTTN-203ENST00000376561 ZNF273Q14593 569 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms