RNA–Protein interactions for RNA: ENST00000376496.4

CLCN6-206, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5 BASIC

Gene CLCN6, Length 2,922 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-206ENST00000376496 LOXL3P58215 753 aa10.42□□□□□ -0.74
CLCN6-206ENST00000376496 ZNF816Q0VGE8 651 aaPredicted RBP10.42□□□□□ -0.74
CLCN6-206ENST00000376496 ZNF273Q14593 569 aa10.42□□□□□ -0.74
CLCN6-206ENST00000376496 FAM74A1Q5RGS3 127 aa10.42□□□□□ -0.74
CLCN6-206ENST00000376496 AVPI1Q5T686 147 aa10.42□□□□□ -0.74
CLCN6-206ENST00000376496 FAM71E2Q8N5Q1 922 aa10.42□□□□□ -0.74
CLCN6-206ENST00000376496 H1FXQ92522 213 aaKnown RBP10.42□□□□□ -0.74
CLCN6-206ENST00000376496 RBPMSQ93062 196 aaKnown RBP10.42□□□□□ -0.74
CLCN6-206ENST00000376496 SMIM3Q9BZL3 60 aa10.42□□□□□ -0.74
CLCN6-206ENST00000376496 SLC25A10Q9UBX3 287 aaPredicted RBP10.42□□□□□ -0.74
CLCN6-206ENST00000376496 MYO18BQ8IUG5 2567 aa10.42□□□□□ -0.74
CLCN6-206ENST00000376496 TRAV38-1A0A0B4J264 116 aa10.42□□□□□ -0.74
CLCN6-206ENST00000376496 CCL3L1P16619 93 aa10.42□□□□□ -0.74
CLCN6-206ENST00000376496 GNG10P50151 68 aa10.42□□□□□ -0.74
CLCN6-206ENST00000376496 MORN2Q502X0 79 aa10.42□□□□□ -0.74
CLCN6-206ENST00000376496 RPL39P5Q59GN2 51 aa10.42□□□□□ -0.74
CLCN6-206ENST00000376496 PRAMEF5Q5TYX0 476 aa10.42□□□□□ -0.74
CLCN6-206ENST00000376496 Q6ZRM9 215 aa10.42□□□□□ -0.74
CLCN6-206ENST00000376496 C1orf229Q6ZS94 237 aaPredicted RBP10.42□□□□□ -0.74
CLCN6-206ENST00000376496 ZNF645Q8N7E2 425 aa10.42□□□□□ -0.74
CLCN6-206ENST00000376496 AGMATQ9BSE5 352 aa10.42□□□□□ -0.74
CLCN6-206ENST00000376496 SDHAF2Q9NX18 166 aa10.42□□□□□ -0.74
CLCN6-206ENST00000376496 LINC00473A8K010 186 aa10.41□□□□□ -0.74
CLCN6-206ENST00000376496 C17orf98A8MV24 154 aa10.41□□□□□ -0.74
CLCN6-206ENST00000376496 F5H0A9 414 aaPredicted RBP10.41□□□□□ -0.74
CLCN6-206ENST00000376496 PROP1O75360 226 aa10.41□□□□□ -0.74
CLCN6-206ENST00000376496 S100GP29377 79 aa10.41□□□□□ -0.74
CLCN6-206ENST00000376496 POLR2GP62487 172 aaKnown RBP eCLIP10.41□□□□□ -0.74
CLCN6-206ENST00000376496 PRB3Q04118 309 aaPredicted RBP10.41□□□□□ -0.74
CLCN6-206ENST00000376496 OR5D13Q8NGL4 314 aa10.41□□□□□ -0.74
CLCN6-206ENST00000376496 RNASE11Q8TAA1 199 aaKnown RBP10.41□□□□□ -0.74
CLCN6-206ENST00000376496 TMEM204Q9BSN7 226 aa10.41□□□□□ -0.74
CLCN6-206ENST00000376496 ZC4H2Q9NQZ6 224 aa10.41□□□□□ -0.74
CLCN6-206ENST00000376496 RCL1Q9Y2P8 373 aaKnown RBP10.41□□□□□ -0.74
CLCN6-206ENST00000376496 TMED3Q9Y3Q3 217 aa10.41□□□□□ -0.74
CLCN6-206ENST00000376496 ZNF462Q96JM2 2506 aa10.41□□□□□ -0.74
CLCN6-206ENST00000376496 A0A0D9SG52 128 aa10.41□□□□□ -0.74
CLCN6-206ENST00000376496 KANTRA0A1W2PQU2 76 aa10.41□□□□□ -0.74
CLCN6-206ENST00000376496 NKX6-3A6NJ46 265 aa10.41□□□□□ -0.74
CLCN6-206ENST00000376496 OR2F2O95006 317 aa10.41□□□□□ -0.74
CLCN6-206ENST00000376496 CGB3P0DN86 165 aa10.41□□□□□ -0.74
CLCN6-206ENST00000376496 CGB7P0DN87 165 aa10.41□□□□□ -0.74
CLCN6-206ENST00000376496 BRWD1-AS2P59051 145 aa10.41□□□□□ -0.74
CLCN6-206ENST00000376496 OR2F1Q13607 317 aa10.41□□□□□ -0.74
CLCN6-206ENST00000376496 NMSQ5H8A3 153 aa10.41□□□□□ -0.74
CLCN6-206ENST00000376496 GPR146Q96CH1 333 aa10.41□□□□□ -0.74
CLCN6-206ENST00000376496 OR6C3Q9NZP0 311 aa10.41□□□□□ -0.74
CLCN6-206ENST00000376496 UBQLN2Q9UHD9 624 aa10.41□□□□□ -0.74
CLCN6-206ENST00000376496 ASH1LQ9NR48 2969 aaKnown RBP10.41□□□□□ -0.74
CLCN6-206ENST00000376496 TRGV10A0A0A0MS01 117 aa10.4□□□□□ -0.74
CLCN6-206ENST00000376496 BCL2L11O43521 198 aa10.4□□□□□ -0.74
CLCN6-206ENST00000376496 DEDDO75618 318 aa10.4□□□□□ -0.74
CLCN6-206ENST00000376496 IGKV1-5P01602 117 aa10.4□□□□□ -0.74
CLCN6-206ENST00000376496 DLX1P56177 255 aa10.4□□□□□ -0.74
CLCN6-206ENST00000376496 PAX5Q02548 391 aa10.4□□□□□ -0.74
CLCN6-206ENST00000376496 C1orf87Q8N0U7 546 aa10.4□□□□□ -0.74
CLCN6-206ENST00000376496 OR4D5Q8NGN0 318 aa10.4□□□□□ -0.74
CLCN6-206ENST00000376496 TCTEX1D2Q8WW35 142 aa10.4□□□□□ -0.74
CLCN6-206ENST00000376496 IFNA7P01567 189 aa10.4□□□□□ -0.74
CLCN6-206ENST00000376496 RNF224P0DH78 156 aa10.4□□□□□ -0.74
CLCN6-206ENST00000376496 HKR1P10072 659 aa10.4□□□□□ -0.74
CLCN6-206ENST00000376496 LPAR6P43657 344 aa10.4□□□□□ -0.74
CLCN6-206ENST00000376496 HTD2P86397 168 aa10.4□□□□□ -0.74
CLCN6-206ENST00000376496 HFEQ30201 348 aa10.4□□□□□ -0.74
CLCN6-206ENST00000376496 ST8SIA2Q92186 375 aa10.4□□□□□ -0.74
CLCN6-206ENST00000376496 AKR1E2Q96JD6 320 aa10.4□□□□□ -0.74
CLCN6-206ENST00000376496 LAMP3Q9UQV4 416 aa10.4□□□□□ -0.74
CLCN6-206ENST00000376496 KBTBD11-OT1A0A1B0GTJ5 212 aa10.4□□□□□ -0.75
CLCN6-206ENST00000376496 DVL1O14640 695 aa10.4□□□□□ -0.75
CLCN6-206ENST00000376496 C4BPBP20851 252 aa10.4□□□□□ -0.75
CLCN6-206ENST00000376496 AKR1C2P52895 323 aa10.4□□□□□ -0.75
CLCN6-206ENST00000376496 RPL31P62899 125 aaKnown RBP10.4□□□□□ -0.75
CLCN6-206ENST00000376496 SRPXP78539 464 aa10.4□□□□□ -0.75
CLCN6-206ENST00000376496 ZNF345Q14585 488 aa10.4□□□□□ -0.75
CLCN6-206ENST00000376496 CITED4Q96RK1 184 aa10.4□□□□□ -0.75
CLCN6-206ENST00000376496 SEBOXQ9HB31 216 aaPredicted RBP10.4□□□□□ -0.75
CLCN6-206ENST00000376496 CLN8Q9UBY8 286 aa10.4□□□□□ -0.75
CLCN6-206ENST00000376496 ARHGAP32A7KAX9 2087 aa10.39□□□□□ -0.75
CLCN6-206ENST00000376496 MALRD1Q5VYJ5 2156 aa10.39□□□□□ -0.75
CLCN6-206ENST00000376496 RPS10-NUDT3A0A1W2PQS6 291 aa10.39□□□□□ -0.75
CLCN6-206ENST00000376496 SSSCA1O60232 199 aa10.39□□□□□ -0.75
CLCN6-206ENST00000376496 CLDN1O95832 211 aa10.39□□□□□ -0.75
CLCN6-206ENST00000376496 KRASP01116 189 aa10.39□□□□□ -0.75
CLCN6-206ENST00000376496 LYL1P12980 280 aa10.39□□□□□ -0.75
CLCN6-206ENST00000376496 VDAC1P21796 283 aa10.39□□□□□ -0.75
CLCN6-206ENST00000376496 GPR12P47775 334 aa10.39□□□□□ -0.75
CLCN6-206ENST00000376496 SMCO1Q147U7 214 aa10.39□□□□□ -0.75
CLCN6-206ENST00000376496 CR1LQ2VPA4 569 aa10.39□□□□□ -0.75
CLCN6-206ENST00000376496 DMBX1Q8NFW5 382 aa10.39□□□□□ -0.75
CLCN6-206ENST00000376496 NARFLQ9H6Q4 476 aa10.39□□□□□ -0.75
CLCN6-206ENST00000376496 PLEKHF2Q9H8W4 249 aa10.39□□□□□ -0.75
CLCN6-206ENST00000376496 MED13LQ71F56 2210 aa10.39□□□□□ -0.75
CLCN6-206ENST00000376496 F2RL2O00254 374 aa10.39□□□□□ -0.75
CLCN6-206ENST00000376496 NDUFS7O75251 213 aa10.39□□□□□ -0.75
CLCN6-206ENST00000376496 S1PR2O95136 353 aa10.39□□□□□ -0.75
CLCN6-206ENST00000376496 RPL12P30050 165 aaKnown RBP10.39□□□□□ -0.75
CLCN6-206ENST00000376496 G6PCP35575 357 aa10.39□□□□□ -0.75
CLCN6-206ENST00000376496 EIF4EBP1Q13541 118 aaPredicted RBP10.39□□□□□ -0.75
CLCN6-206ENST00000376496 CT45A1Q5HYN5 189 aa10.39□□□□□ -0.75
CLCN6-206ENST00000376496 NCR3LG1Q68D85 454 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms