RNA–Protein interactions for RNA: ENST00000376395.8

UBQLN1-202, Transcript of ubiquilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN1, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-202ENST00000376395 ELOA3CA0A087WX78 387 aaPredicted RBP12.66□□□□□ -0.38
UBQLN1-202ENST00000376395 B4DEV8 164 aa12.66□□□□□ -0.38
UBQLN1-202ENST00000376395 H0Y980 276 aa12.66□□□□□ -0.38
UBQLN1-202ENST00000376395 TAAR6Q96RI8 345 aa12.66□□□□□ -0.38
UBQLN1-202ENST00000376395 SMDT1Q9H4I9 107 aa12.66□□□□□ -0.38
UBQLN1-202ENST00000376395 VSIRQ9H7M9 311 aa12.66□□□□□ -0.38
UBQLN1-202ENST00000376395 TREM2Q9NZC2 230 aa12.66□□□□□ -0.38
UBQLN1-202ENST00000376395 CHD9Q3L8U1 2897 aa12.66□□□□□ -0.38
UBQLN1-202ENST00000376395 SPEGQ15772 3267 aa12.65□□□□□ -0.38
UBQLN1-202ENST00000376395 CA11O75493 328 aa12.65□□□□□ -0.38
UBQLN1-202ENST00000376395 AGFG2O95081 481 aa12.65□□□□□ -0.38
UBQLN1-202ENST00000376395 TFF1P04155 84 aa12.65□□□□□ -0.38
UBQLN1-202ENST00000376395 PAX6P26367 422 aa12.65□□□□□ -0.38
UBQLN1-202ENST00000376395 TRA2AQ13595 282 aaKnown RBP eCLIP12.65□□□□□ -0.38
UBQLN1-202ENST00000376395 KCNMB1Q16558 191 aa12.65□□□□□ -0.38
UBQLN1-202ENST00000376395 MDP1Q86V88 176 aa12.65□□□□□ -0.38
UBQLN1-202ENST00000376395 OR52L2PQ8NGH6 319 aa12.65□□□□□ -0.38
UBQLN1-202ENST00000376395 DNASE2BQ8WZ79 361 aa12.65□□□□□ -0.38
UBQLN1-202ENST00000376395 DLL3Q9NYJ7 618 aa12.65□□□□□ -0.38
UBQLN1-202ENST00000376395 ST8SIA5O15466 376 aa12.65□□□□□ -0.38
UBQLN1-202ENST00000376395 SPRY3O43610 288 aa12.65□□□□□ -0.38
UBQLN1-202ENST00000376395 UMODP07911 640 aa12.65□□□□□ -0.38
UBQLN1-202ENST00000376395 LRFN3Q9BTN0 628 aa12.65□□□□□ -0.38
UBQLN1-202ENST00000376395 PITPNC1Q9UKF7 332 aa12.65□□□□□ -0.38
UBQLN1-202ENST00000376395 A0A1B0GV90 55 aa12.65□□□□□ -0.38
UBQLN1-202ENST00000376395 DNPH1O43598 174 aa12.65□□□□□ -0.38
UBQLN1-202ENST00000376395 PMCHP20382 165 aa12.65□□□□□ -0.38
UBQLN1-202ENST00000376395 TNFSF4P23510 183 aa12.65□□□□□ -0.38
UBQLN1-202ENST00000376395 CFPP27918 469 aa12.65□□□□□ -0.38
UBQLN1-202ENST00000376395 MEF2BQ02080 365 aaPredicted RBP12.65□□□□□ -0.38
UBQLN1-202ENST00000376395 RNPS1Q15287 305 aaKnown RBP12.65□□□□□ -0.38
UBQLN1-202ENST00000376395 C17orf82Q86X59 251 aaPredicted RBP12.65□□□□□ -0.38
UBQLN1-202ENST00000376395 RBMXL3Q8N7X1 1067 aaKnown RBP12.65□□□□□ -0.38
UBQLN1-202ENST00000376395 BORCS7Q96B45 105 aa12.65□□□□□ -0.38
UBQLN1-202ENST00000376395 IGLV3-12A0A075B6K2 115 aa12.64□□□□□ -0.39
UBQLN1-202ENST00000376395 KIAA1324LA8MWY0 1029 aaPredicted RBP12.64□□□□□ -0.39
UBQLN1-202ENST00000376395 K7N7A8 449 aa12.64□□□□□ -0.39
UBQLN1-202ENST00000376395 NDUFS6O75380 124 aaKnown RBP12.64□□□□□ -0.39
UBQLN1-202ENST00000376395 HAND1O96004 215 aa12.64□□□□□ -0.39
UBQLN1-202ENST00000376395 GNG10P50151 68 aa12.64□□□□□ -0.39
UBQLN1-202ENST00000376395 IQCJQ1A5X6 159 aa12.64□□□□□ -0.39
UBQLN1-202ENST00000376395 SLC35E3Q7Z769 313 aa12.64□□□□□ -0.39
UBQLN1-202ENST00000376395 FGFRL1Q8N441 504 aa12.64□□□□□ -0.39
UBQLN1-202ENST00000376395 SIGLECL1Q8N7X8 197 aa12.64□□□□□ -0.39
UBQLN1-202ENST00000376395 FADS6Q8N9I5 356 aa12.64□□□□□ -0.39
UBQLN1-202ENST00000376395 OR2M7Q8NG81 312 aa12.64□□□□□ -0.39
UBQLN1-202ENST00000376395 C18orf12Q96KH6 178 aa12.64□□□□□ -0.39
UBQLN1-202ENST00000376395 TAAR9Q96RI9 348 aa12.64□□□□□ -0.39
UBQLN1-202ENST00000376395 RAB9BQ9NP90 201 aa12.64□□□□□ -0.39
UBQLN1-202ENST00000376395 ZDHHC8Q9ULC8 765 aa12.64□□□□□ -0.39
UBQLN1-202ENST00000376395 CYB5R3P00387 301 aaPredicted RBP12.64□□□□□ -0.39
UBQLN1-202ENST00000376395 TCL1AP56279 114 aa12.64□□□□□ -0.39
UBQLN1-202ENST00000376395 ZNF385CQ66K41 422 aaPredicted RBP12.64□□□□□ -0.39
UBQLN1-202ENST00000376395 C22orf15Q8WYQ4 148 aa12.64□□□□□ -0.39
UBQLN1-202ENST00000376395 CTDSP1Q9GZU7 261 aa12.64□□□□□ -0.39
UBQLN1-202ENST00000376395 KCNIP2Q9NS61 270 aa12.64□□□□□ -0.39
UBQLN1-202ENST00000376395 ERVFRD-1P60508 538 aa12.64□□□□□ -0.39
UBQLN1-202ENST00000376395 SCCPDHQ8NBX0 429 aa12.64□□□□□ -0.39
UBQLN1-202ENST00000376395 OR1L1Q8NH94 360 aa12.64□□□□□ -0.39
UBQLN1-202ENST00000376395 SLC25A40Q8TBP6 338 aa12.64□□□□□ -0.39
UBQLN1-202ENST00000376395 ACY3Q96HD9 319 aa12.64□□□□□ -0.39
UBQLN1-202ENST00000376395 RCC1LQ96I51 464 aaKnown RBP12.64□□□□□ -0.39
UBQLN1-202ENST00000376395 RNF122Q9H9V4 155 aa12.64□□□□□ -0.39
UBQLN1-202ENST00000376395 PLA2G2EQ9NZK7 142 aa12.64□□□□□ -0.39
UBQLN1-202ENST00000376395 DUXBA0A1W2PPF3 345 aa12.64□□□□□ -0.39
UBQLN1-202ENST00000376395 CD55P08174 381 aa12.64□□□□□ -0.39
UBQLN1-202ENST00000376395 LYG1Q8N1E2 194 aa12.64□□□□□ -0.39
UBQLN1-202ENST00000376395 ZNF331Q9NQX6 463 aaPredicted RBP12.64□□□□□ -0.39
UBQLN1-202ENST00000376395 M0R1B8 84 aa12.63□□□□□ -0.39
UBQLN1-202ENST00000376395 OR5G3P0C626 314 aa12.63□□□□□ -0.39
UBQLN1-202ENST00000376395 RNF224P0DH78 156 aa12.63□□□□□ -0.39
UBQLN1-202ENST00000376395 SLC25A53Q5H9E4 307 aa12.63□□□□□ -0.39
UBQLN1-202ENST00000376395 ACSM6Q6P461 480 aa12.63□□□□□ -0.39
UBQLN1-202ENST00000376395 DTX1Q86Y01 620 aa12.63□□□□□ -0.39
UBQLN1-202ENST00000376395 LRRC29Q8WV35 223 aa12.63□□□□□ -0.39
UBQLN1-202ENST00000376395 TAF15Q92804 592 aaKnown RBP eCLIP12.63□□□□□ -0.39
UBQLN1-202ENST00000376395 FCN1O00602 326 aa12.63□□□□□ -0.39
UBQLN1-202ENST00000376395 GYPAP02724 150 aa12.63□□□□□ -0.39
UBQLN1-202ENST00000376395 UCP3P55916 312 aa12.63□□□□□ -0.39
UBQLN1-202ENST00000376395 RSPO1Q2MKA7 263 aaPredicted RBP12.63□□□□□ -0.39
UBQLN1-202ENST00000376395 DAZAP1Q96EP5 407 aaKnown RBP12.63□□□□□ -0.39
UBQLN1-202ENST00000376395 PARD6AQ9NPB6 346 aa12.63□□□□□ -0.39
UBQLN1-202ENST00000376395 TRAV34A0A0B4J273 112 aa12.63□□□□□ -0.39
UBQLN1-202ENST00000376395 UBE2CO00762 179 aa12.63□□□□□ -0.39
UBQLN1-202ENST00000376395 OR2H2O95918 312 aa12.63□□□□□ -0.39
UBQLN1-202ENST00000376395 ICAM4Q14773 271 aa12.63□□□□□ -0.39
UBQLN1-202ENST00000376395 OR5D13Q8NGL4 314 aa12.63□□□□□ -0.39
UBQLN1-202ENST00000376395 TPPP3Q9BW30 176 aa12.63□□□□□ -0.39
UBQLN1-202ENST00000376395 NAT8BQ9UHF3 227 aa12.63□□□□□ -0.39
UBQLN1-202ENST00000376395 CTXND1A0A1B0GTU2 59 aa12.62□□□□□ -0.39
UBQLN1-202ENST00000376395 GLIPR1P48060 266 aa12.62□□□□□ -0.39
UBQLN1-202ENST00000376395 THBS3P49746 956 aa12.62□□□□□ -0.39
UBQLN1-202ENST00000376395 R3HDM4Q96D70 268 aa12.62□□□□□ -0.39
UBQLN1-202ENST00000376395 TRAV38-1A0A0B4J264 116 aa12.62□□□□□ -0.39
UBQLN1-202ENST00000376395 HIST1H2BKO60814 126 aa12.62□□□□□ -0.39
UBQLN1-202ENST00000376395 HIST1H2BJP06899 126 aa12.62□□□□□ -0.39
UBQLN1-202ENST00000376395 HIST1H2BOP23527 126 aa12.62□□□□□ -0.39
UBQLN1-202ENST00000376395 HIST1H2BBP33778 126 aa12.62□□□□□ -0.39
UBQLN1-202ENST00000376395 HIST1H2BDP58876 126 aa12.62□□□□□ -0.39
UBQLN1-202ENST00000376395 HIST1H2BCP62807 126 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms