RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 PATE3B3GLJ2 98 aa9.96□□□□□ -0.82
PTCH1-203ENST00000375274 BMPR1BO00238 502 aa9.96□□□□□ -0.82
PTCH1-203ENST00000375274 ZNHIT1O43257 154 aa9.96□□□□□ -0.82
PTCH1-203ENST00000375274 CSN3P07498 182 aa9.96□□□□□ -0.82
PTCH1-203ENST00000375274 SUCLG1P53597 346 aaKnown RBP9.96□□□□□ -0.82
PTCH1-203ENST00000375274 DCAF10Q5QP82 559 aa9.96□□□□□ -0.82
PTCH1-203ENST00000375274 TGIF2LXQ8IUE1 241 aa9.96□□□□□ -0.82
PTCH1-203ENST00000375274 SELENOHQ8IZQ5 122 aaKnown RBP9.96□□□□□ -0.82
PTCH1-203ENST00000375274 LILRB1Q8NHL6 650 aaPredicted RBP9.96□□□□□ -0.82
PTCH1-203ENST00000375274 TMEM191AQ9H0A3 160 aa9.96□□□□□ -0.82
PTCH1-203ENST00000375274 TGIF2-C20orf24A0A0A6YYL0 155 aa9.95□□□□□ -0.82
PTCH1-203ENST00000375274 IGKV1D-43A0A0B4J1Z2 117 aa9.95□□□□□ -0.82
PTCH1-203ENST00000375274 C21orf140B9A014 251 aa9.95□□□□□ -0.82
PTCH1-203ENST00000375274 GAMTQ14353 236 aa9.95□□□□□ -0.82
PTCH1-203ENST00000375274 C1orf210Q8IVY1 113 aa9.95□□□□□ -0.82
PTCH1-203ENST00000375274 HEATR5BQ9P2D3 2071 aa9.95□□□□□ -0.82
PTCH1-203ENST00000375274 TGIF1Q15583 401 aa9.95□□□□□ -0.82
PTCH1-203ENST00000375274 TMEM204Q9BSN7 226 aa9.95□□□□□ -0.82
PTCH1-203ENST00000375274 DNASE2O00115 360 aaPredicted RBP9.95□□□□□ -0.82
PTCH1-203ENST00000375274 AGFG2O95081 481 aa9.95□□□□□ -0.82
PTCH1-203ENST00000375274 WDR25Q64LD2 544 aaPredicted RBP9.95□□□□□ -0.82
PTCH1-203ENST00000375274 ZNF385CQ66K41 422 aaPredicted RBP9.95□□□□□ -0.82
PTCH1-203ENST00000375274 CA5BP1Q8WTZ4 195 aa9.95□□□□□ -0.82
PTCH1-203ENST00000375274 IER2Q9BTL4 223 aa9.95□□□□□ -0.82
PTCH1-203ENST00000375274 METTL1Q9UBP6 276 aaKnown RBP9.95□□□□□ -0.82
PTCH1-203ENST00000375274 IL17BQ9UHF5 180 aa9.95□□□□□ -0.82
PTCH1-203ENST00000375274 A0A087WV48 116 aa9.95□□□□□ -0.82
PTCH1-203ENST00000375274 J3QR06 171 aa9.95□□□□□ -0.82
PTCH1-203ENST00000375274 NEURL1O76050 574 aa9.95□□□□□ -0.82
PTCH1-203ENST00000375274 TXNDC17Q9BRA2 123 aa9.95□□□□□ -0.82
PTCH1-203ENST00000375274 DLL3Q9NYJ7 618 aa9.95□□□□□ -0.82
PTCH1-203ENST00000375274 IL19Q9UHD0 177 aa9.95□□□□□ -0.82
PTCH1-203ENST00000375274 HS3ST3B1Q9Y662 390 aa9.95□□□□□ -0.82
PTCH1-203ENST00000375274 MPDU1O75352 247 aa9.94□□□□□ -0.82
PTCH1-203ENST00000375274 HBZP02008 142 aa9.94□□□□□ -0.82
PTCH1-203ENST00000375274 NPBWR2P48146 333 aa9.94□□□□□ -0.82
PTCH1-203ENST00000375274 IZUMO4Q1ZYL8 232 aa9.94□□□□□ -0.82
PTCH1-203ENST00000375274 HES3Q5TGS1 186 aa9.94□□□□□ -0.82
PTCH1-203ENST00000375274 GFRALQ6UXV0 394 aa9.94□□□□□ -0.82
PTCH1-203ENST00000375274 OR1B1Q8NGR6 318 aa9.94□□□□□ -0.82
PTCH1-203ENST00000375274 HARBI1Q96MB7 349 aa9.94□□□□□ -0.82
PTCH1-203ENST00000375274 GSX1Q9H4S2 264 aaPredicted RBP9.94□□□□□ -0.82
PTCH1-203ENST00000375274 TP53BP1Q12888 1972 aaPredicted RBP9.94□□□□□ -0.82
PTCH1-203ENST00000375274 TRAV38-1A0A0B4J264 116 aa9.94□□□□□ -0.82
PTCH1-203ENST00000375274 ZNF785A8K8V0 405 aa9.94□□□□□ -0.82
PTCH1-203ENST00000375274 OR2H2O95918 312 aa9.94□□□□□ -0.82
PTCH1-203ENST00000375274 HPRT1P00492 218 aa9.94□□□□□ -0.82
PTCH1-203ENST00000375274 S100A4P26447 101 aaKnown RBP9.94□□□□□ -0.82
PTCH1-203ENST00000375274 LYZP61626 148 aa9.94□□□□□ -0.82
PTCH1-203ENST00000375274 GABRA6Q16445 453 aa9.94□□□□□ -0.82
PTCH1-203ENST00000375274 LY6G6FQ5SQ64 297 aa9.94□□□□□ -0.82
PTCH1-203ENST00000375274 OR52L2PQ8NGH6 319 aa9.94□□□□□ -0.82
PTCH1-203ENST00000375274 OR1P1Q8NH06 330 aa9.94□□□□□ -0.82
PTCH1-203ENST00000375274 RHOVQ96L33 236 aa9.94□□□□□ -0.82
PTCH1-203ENST00000375274 PXMP4Q9Y6I8 212 aa9.94□□□□□ -0.82
PTCH1-203ENST00000375274 NCBP2LA6PVI3 153 aaKnown RBP9.94□□□□□ -0.82
PTCH1-203ENST00000375274 PRR32B1ATL7 298 aa9.94□□□□□ -0.82
PTCH1-203ENST00000375274 RAMP1O60894 148 aa9.94□□□□□ -0.82
PTCH1-203ENST00000375274 COL8A1P27658 744 aa9.94□□□□□ -0.82
PTCH1-203ENST00000375274 LBHQ53QV2 105 aaPredicted RBP9.94□□□□□ -0.82
PTCH1-203ENST00000375274 GALNT14Q96FL9 552 aa9.94□□□□□ -0.82
PTCH1-203ENST00000375274 TP53RKQ96S44 253 aa9.94□□□□□ -0.82
PTCH1-203ENST00000375274 PATJQ8NI35 1801 aa9.94□□□□□ -0.82
PTCH1-203ENST00000375274 RALGAPA1Q6GYQ0 2036 aa9.94□□□□□ -0.82
PTCH1-203ENST00000375274 IGHV1-45A0A0A0MS14 117 aa9.94□□□□□ -0.82
PTCH1-203ENST00000375274 A0A1B0GTI1 187 aa9.94□□□□□ -0.82
PTCH1-203ENST00000375274 LOC390937A0A1W2PQ73 354 aa9.94□□□□□ -0.82
PTCH1-203ENST00000375274 LYPD3O95274 346 aa9.94□□□□□ -0.82
PTCH1-203ENST00000375274 TRGC1P0CF51 173 aa9.94□□□□□ -0.82
PTCH1-203ENST00000375274 DDTP30046 118 aa9.94□□□□□ -0.82
PTCH1-203ENST00000375274 BRS3P32247 399 aa9.94□□□□□ -0.82
PTCH1-203ENST00000375274 TNXAQ16473 311 aa9.94□□□□□ -0.82
PTCH1-203ENST00000375274 ZNF818PQ6ZRF7 136 aa9.94□□□□□ -0.82
PTCH1-203ENST00000375274 MARS2Q96GW9 593 aaKnown RBP9.94□□□□□ -0.82
PTCH1-203ENST00000375274 SPSB2Q99619 263 aa9.94□□□□□ -0.82
PTCH1-203ENST00000375274 TTTY12Q9BZ98 90 aa9.94□□□□□ -0.82
PTCH1-203ENST00000375274 RIF1Q5UIP0 2472 aaKnown RBP9.93□□□□□ -0.82
PTCH1-203ENST00000375274 FAM90A26D6RGX4 464 aa9.93□□□□□ -0.82
PTCH1-203ENST00000375274 KLK10O43240 276 aa9.93□□□□□ -0.82
PTCH1-203ENST00000375274 P01737 135 aa9.93□□□□□ -0.82
PTCH1-203ENST00000375274 FAM87AP0C7U9 286 aa9.93□□□□□ -0.82
PTCH1-203ENST00000375274 Q56UQ5 140 aa9.93□□□□□ -0.82
PTCH1-203ENST00000375274 C10orf128Q5T292 105 aa9.93□□□□□ -0.82
PTCH1-203ENST00000375274 ASPHD2Q6ICH7 369 aa9.93□□□□□ -0.82
PTCH1-203ENST00000375274 OR4X1Q8NH49 305 aa9.93□□□□□ -0.82
PTCH1-203ENST00000375274 RPRMQ9NS64 109 aa9.93□□□□□ -0.82
PTCH1-203ENST00000375274 RNF7Q9UBF6 113 aa9.93□□□□□ -0.82
PTCH1-203ENST00000375274 TRBV23-1A0A0A0MS06 115 aa9.93□□□□□ -0.82
PTCH1-203ENST00000375274 OR2J3O76001 311 aa9.93□□□□□ -0.82
PTCH1-203ENST00000375274 GCGP01275 180 aa9.93□□□□□ -0.82
PTCH1-203ENST00000375274 IGFBP3P17936 291 aaPredicted RBP9.93□□□□□ -0.82
PTCH1-203ENST00000375274 COX7A1P24310 79 aa9.93□□□□□ -0.82
PTCH1-203ENST00000375274 SRP14P37108 136 aaKnown RBP9.93□□□□□ -0.82
PTCH1-203ENST00000375274 OR2D3Q8NGH3 330 aa9.93□□□□□ -0.82
PTCH1-203ENST00000375274 CHRNA10Q9GZZ6 450 aa9.93□□□□□ -0.82
PTCH1-203ENST00000375274 DIRC3C9JPN6 131 aa9.93□□□□□ -0.82
PTCH1-203ENST00000375274 RPLP1P05386 114 aaKnown RBP9.93□□□□□ -0.82
PTCH1-203ENST00000375274 PRDX2P32119 198 aa9.93□□□□□ -0.82
PTCH1-203ENST00000375274 GLIPR1P48060 266 aa9.93□□□□□ -0.82
PTCH1-203ENST00000375274 MFAP2P55001 183 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms