RNA–Protein interactions for RNA: ENST00000375271.4

PTCH1-202, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-202ENST00000375271 SOX15O60248 233 aa10.84□□□□□ -0.67
PTCH1-202ENST00000375271 GLAP06280 429 aa10.84□□□□□ -0.67
PTCH1-202ENST00000375271 MGMTP16455 207 aa10.84□□□□□ -0.67
PTCH1-202ENST00000375271 MYL12AP19105 171 aa10.84□□□□□ -0.67
PTCH1-202ENST00000375271 CRIP2P52943 208 aaPredicted RBP10.84□□□□□ -0.67
PTCH1-202ENST00000375271 MOGAT2Q3SYC2 334 aa10.84□□□□□ -0.67
PTCH1-202ENST00000375271 AKIRIN2Q53H80 203 aa10.84□□□□□ -0.67
PTCH1-202ENST00000375271 Q8N1Y9 231 aa10.84□□□□□ -0.67
PTCH1-202ENST00000375271 GRPEL2Q8TAA5 225 aa10.84□□□□□ -0.67
PTCH1-202ENST00000375271 SMIM19Q96E16 107 aa10.84□□□□□ -0.67
PTCH1-202ENST00000375271 NEDD4LQ96PU5 975 aa10.84□□□□□ -0.67
PTCH1-202ENST00000375271 WASHC3Q9Y3C0 194 aa10.84□□□□□ -0.67
PTCH1-202ENST00000375271 FBXO7Q9Y3I1 522 aa10.84□□□□□ -0.67
PTCH1-202ENST00000375271 CSMD3Q7Z407 3707 aa10.84□□□□□ -0.67
PTCH1-202ENST00000375271 IRGMA1A4Y4 181 aa10.83□□□□□ -0.68
PTCH1-202ENST00000375271 ANKRD34BA5PLL1 514 aa10.83□□□□□ -0.68
PTCH1-202ENST00000375271 ST8SIA5O15466 376 aa10.83□□□□□ -0.68
PTCH1-202ENST00000375271 PDCD6O75340 191 aa10.83□□□□□ -0.68
PTCH1-202ENST00000375271 CNIH1O95406 144 aa10.83□□□□□ -0.68
PTCH1-202ENST00000375271 CPEP16870 476 aa10.83□□□□□ -0.68
PTCH1-202ENST00000375271 Q499Y3 187 aa10.83□□□□□ -0.68
PTCH1-202ENST00000375271 SETD6Q8TBK2 473 aa10.83□□□□□ -0.68
PTCH1-202ENST00000375271 ORAI1Q96D31 301 aa10.83□□□□□ -0.68
PTCH1-202ENST00000375271 RHOVQ96L33 236 aa10.83□□□□□ -0.68
PTCH1-202ENST00000375271 TSNAXQ99598 290 aaKnown RBP10.83□□□□□ -0.68
PTCH1-202ENST00000375271 TPSG1Q9NRR2 321 aa10.83□□□□□ -0.68
PTCH1-202ENST00000375271 MBNL3Q9NUK0 354 aaKnown RBP10.83□□□□□ -0.68
PTCH1-202ENST00000375271 NUBP2Q9Y5Y2 271 aa10.83□□□□□ -0.68
PTCH1-202ENST00000375271 GPX5O75715 221 aa10.82□□□□□ -0.68
PTCH1-202ENST00000375271 CA2P00918 260 aa10.82□□□□□ -0.68
PTCH1-202ENST00000375271 CAPGP40121 348 aa10.82□□□□□ -0.68
PTCH1-202ENST00000375271 YIF1BQ5BJH7 314 aa10.82□□□□□ -0.68
PTCH1-202ENST00000375271 GLDNQ6ZMI3 551 aaPredicted RBP10.82□□□□□ -0.68
PTCH1-202ENST00000375271 ODF3L1Q8IXM7 274 aa10.82□□□□□ -0.68
PTCH1-202ENST00000375271 GAPTQ8N292 157 aa10.82□□□□□ -0.68
PTCH1-202ENST00000375271 Q8N402 240 aa10.82□□□□□ -0.68
PTCH1-202ENST00000375271 POC5Q8NA72 575 aa10.82□□□□□ -0.68
PTCH1-202ENST00000375271 OR9G4Q8NGQ1 327 aa10.82□□□□□ -0.68
PTCH1-202ENST00000375271 CEPT1Q9Y6K0 416 aa10.82□□□□□ -0.68
PTCH1-202ENST00000375271 A0A0B4J203 849 aa10.81□□□□□ -0.68
PTCH1-202ENST00000375271 SHISA3A0PJX4 238 aa10.81□□□□□ -0.68
PTCH1-202ENST00000375271 H3BUA1 57 aa10.81□□□□□ -0.68
PTCH1-202ENST00000375271 SC5DO75845 299 aa10.81□□□□□ -0.68
PTCH1-202ENST00000375271 ATP5HO75947 161 aa10.81□□□□□ -0.68
PTCH1-202ENST00000375271 TPPPO94811 219 aa10.81□□□□□ -0.68
PTCH1-202ENST00000375271 BAG2O95816 211 aa10.81□□□□□ -0.68
PTCH1-202ENST00000375271 APOA2P02652 100 aa10.81□□□□□ -0.68
PTCH1-202ENST00000375271 LGALS7P47929 136 aa10.81□□□□□ -0.68
PTCH1-202ENST00000375271 SYNJ2BPP57105 145 aa10.81□□□□□ -0.68
PTCH1-202ENST00000375271 RPS16P62249 146 aaKnown RBP10.81□□□□□ -0.68
PTCH1-202ENST00000375271 RPEL1Q2QD12 228 aa10.81□□□□□ -0.68
PTCH1-202ENST00000375271 RPL39P5Q59GN2 51 aa10.81□□□□□ -0.68
PTCH1-202ENST00000375271 C19orf54Q5BKX5 351 aa10.81□□□□□ -0.68
PTCH1-202ENST00000375271 LY6G6FQ5SQ64 297 aa10.81□□□□□ -0.68
PTCH1-202ENST00000375271 DMKNQ6E0U4 476 aaPredicted RBP10.81□□□□□ -0.68
PTCH1-202ENST00000375271 ZNF562Q6V9R5 426 aa10.81□□□□□ -0.68
PTCH1-202ENST00000375271 CBR4Q8N4T8 237 aa10.81□□□□□ -0.68
PTCH1-202ENST00000375271 NKAIN3Q8N8D7 197 aa10.81□□□□□ -0.68
PTCH1-202ENST00000375271 OR13C5Q8NGS8 318 aa10.81□□□□□ -0.68
PTCH1-202ENST00000375271 MRPL30Q8TCC3 161 aaKnown RBP10.81□□□□□ -0.68
PTCH1-202ENST00000375271 EDARADDQ8WWZ3 215 aa10.81□□□□□ -0.68
PTCH1-202ENST00000375271 PYDC1Q8WXC3 89 aa10.81□□□□□ -0.68
PTCH1-202ENST00000375271 FAM46BQ96A09 425 aa10.81□□□□□ -0.68
PTCH1-202ENST00000375271 RNF5Q99942 180 aa10.81□□□□□ -0.68
PTCH1-202ENST00000375271 SLC2A8Q9NY64 477 aa10.81□□□□□ -0.68
PTCH1-202ENST00000375271 PEMTQ9UBM1 199 aa10.81□□□□□ -0.68
PTCH1-202ENST00000375271 SLC23A1Q9UHI7 598 aa10.81□□□□□ -0.68
PTCH1-202ENST00000375271 DNAH1Q9P2D7 4330 aa10.8□□□□□ -0.68
PTCH1-202ENST00000375271 FCN1O00602 326 aa10.8□□□□□ -0.68
PTCH1-202ENST00000375271 SPDEFO95238 335 aa10.8□□□□□ -0.68
PTCH1-202ENST00000375271 LIMS3P0CW19 117 aa10.8□□□□□ -0.68
PTCH1-202ENST00000375271 LIMS4P0CW20 117 aa10.8□□□□□ -0.68
PTCH1-202ENST00000375271 IGFBP3P17936 291 aaPredicted RBP10.8□□□□□ -0.68
PTCH1-202ENST00000375271 FSTP19883 344 aa10.8□□□□□ -0.68
PTCH1-202ENST00000375271 AADACP22760 399 aa10.8□□□□□ -0.68
PTCH1-202ENST00000375271 DCKP27707 260 aa10.8□□□□□ -0.68
PTCH1-202ENST00000375271 CBX3Q13185 183 aa10.8□□□□□ -0.68
PTCH1-202ENST00000375271 FXYD3Q14802 87 aa10.8□□□□□ -0.68
PTCH1-202ENST00000375271 OR2G6Q5TZ20 316 aa10.8□□□□□ -0.68
PTCH1-202ENST00000375271 XAF1Q6GPH4 301 aa10.8□□□□□ -0.68
PTCH1-202ENST00000375271 MOB1BQ7L9L4 216 aa10.8□□□□□ -0.68
PTCH1-202ENST00000375271 RHOXF1Q8NHV9 184 aa10.8□□□□□ -0.68
PTCH1-202ENST00000375271 GHSRQ92847 366 aa10.8□□□□□ -0.68
PTCH1-202ENST00000375271 Q96M66 194 aa10.8□□□□□ -0.68
PTCH1-202ENST00000375271 FAM110AQ9BQ89 295 aa10.8□□□□□ -0.68
PTCH1-202ENST00000375271 IFI27L2Q9H2X8 130 aa10.8□□□□□ -0.68
PTCH1-202ENST00000375271 PLEKHA3Q9HB20 300 aa10.8□□□□□ -0.68
PTCH1-202ENST00000375271 RETNQ9HD89 108 aa10.8□□□□□ -0.68
PTCH1-202ENST00000375271 BABAM2Q9NXR7 383 aa10.8□□□□□ -0.68
PTCH1-202ENST00000375271 GAB2Q9UQC2 676 aa10.8□□□□□ -0.68
PTCH1-202ENST00000375271 EXOSC1Q9Y3B2 195 aaKnown RBP10.8□□□□□ -0.68
PTCH1-202ENST00000375271 TRAV8-7A0A075B6U6 113 aa10.79□□□□□ -0.68
PTCH1-202ENST00000375271 A0A1W2PPK0 400 aa10.79□□□□□ -0.68
PTCH1-202ENST00000375271 H0YJW9 148 aa10.79□□□□□ -0.68
PTCH1-202ENST00000375271 GABRB1P18505 474 aa10.79□□□□□ -0.68
PTCH1-202ENST00000375271 CD81P60033 236 aa10.79□□□□□ -0.68
PTCH1-202ENST00000375271 PSG5Q15238 335 aa10.79□□□□□ -0.68
PTCH1-202ENST00000375271 HMGN3Q15651 99 aa10.79□□□□□ -0.68
PTCH1-202ENST00000375271 CDH26Q8IXH8 852 aa10.79□□□□□ -0.68
PTCH1-202ENST00000375271 ZNF555Q8NEP9 628 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms