RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 MRPL52Q86TS9 123 aaKnown RBP6.98□□□□□ -1.29
UBR4-202ENST00000375224 SLC25A40Q8TBP6 338 aa6.98□□□□□ -1.29
UBR4-202ENST00000375224 HIST1H2BHQ93079 126 aa6.98□□□□□ -1.29
UBR4-202ENST00000375224 HIST1H2BNQ99877 126 aa6.98□□□□□ -1.29
UBR4-202ENST00000375224 HIST1H2BMQ99879 126 aa6.98□□□□□ -1.29
UBR4-202ENST00000375224 CNTNAP3Q9BZ76 1288 aa6.98□□□□□ -1.29
UBR4-202ENST00000375224 OR2J1Q9GZK6 312 aa6.98□□□□□ -1.29
UBR4-202ENST00000375224 PRR13Q9NZ81 148 aa6.98□□□□□ -1.29
UBR4-202ENST00000375224 EP300Q09472 2414 aaPredicted RBP6.98□□□□□ -1.29
UBR4-202ENST00000375224 DEGS1O15121 323 aa6.98□□□□□ -1.29
UBR4-202ENST00000375224 KCNAB3O43448 404 aa6.98□□□□□ -1.29
UBR4-202ENST00000375224 IGKV3-15P01624 115 aa6.98□□□□□ -1.29
UBR4-202ENST00000375224 S100A10P60903 97 aa6.98□□□□□ -1.29
UBR4-202ENST00000375224 RND3P61587 244 aa6.98□□□□□ -1.29
UBR4-202ENST00000375224 SELENOTP62341 195 aa6.98□□□□□ -1.29
UBR4-202ENST00000375224 VWA1Q6PCB0 445 aa6.98□□□□□ -1.29
UBR4-202ENST00000375224 HEPN1Q6WQI6 88 aa6.98□□□□□ -1.29
UBR4-202ENST00000375224 MOB1BQ7L9L4 216 aa6.98□□□□□ -1.29
UBR4-202ENST00000375224 MRPL41Q8IXM3 137 aaKnown RBP6.98□□□□□ -1.29
UBR4-202ENST00000375224 BATF2Q8N1L9 274 aa6.98□□□□□ -1.29
UBR4-202ENST00000375224 DOCK7Q96N67 2140 aa6.98□□□□□ -1.29
UBR4-202ENST00000375224 HIST1H2BLQ99880 126 aa6.98□□□□□ -1.29
UBR4-202ENST00000375224 ACTR3CQ9C0K3 210 aaPredicted RBP6.98□□□□□ -1.29
UBR4-202ENST00000375224 OR2S2Q9NQN1 319 aa6.98□□□□□ -1.29
UBR4-202ENST00000375224 FAM186AA6NE01 2351 aa6.98□□□□□ -1.29
UBR4-202ENST00000375224 ZNF705FA8MVS1 300 aaPredicted RBP6.97□□□□□ -1.29
UBR4-202ENST00000375224 C22orf46C9J442 243 aa6.97□□□□□ -1.29
UBR4-202ENST00000375224 UMAD1C9J7I0 102 aa6.97□□□□□ -1.29
UBR4-202ENST00000375224 F6UZH7 168 aa6.97□□□□□ -1.29
UBR4-202ENST00000375224 H0YIZ8 118 aa6.97□□□□□ -1.29
UBR4-202ENST00000375224 K7EP13 123 aa6.97□□□□□ -1.29
UBR4-202ENST00000375224 CELA3BP08861 270 aa6.97□□□□□ -1.29
UBR4-202ENST00000375224 OR5AC1P0C628 307 aa6.97□□□□□ -1.29
UBR4-202ENST00000375224 ZNF705DP0CH99 300 aaPredicted RBP6.97□□□□□ -1.29
UBR4-202ENST00000375224 ZNF705BP0CI00 300 aaPredicted RBP6.97□□□□□ -1.29
UBR4-202ENST00000375224 C4orf17Q53FE4 359 aa6.97□□□□□ -1.29
UBR4-202ENST00000375224 ZNF585AQ6P3V2 769 aa6.97□□□□□ -1.29
UBR4-202ENST00000375224 C5orf24Q7Z6I8 188 aa6.97□□□□□ -1.29
UBR4-202ENST00000375224 FAM169BQ8N8A8 192 aa6.97□□□□□ -1.29
UBR4-202ENST00000375224 DLL3Q9NYJ7 618 aa6.97□□□□□ -1.29
UBR4-202ENST00000375224 PITPNC1Q9UKF7 332 aa6.97□□□□□ -1.29
UBR4-202ENST00000375224 AMDHD2Q9Y303 409 aa6.97□□□□□ -1.29
UBR4-202ENST00000375224 URGCP-MRPS24S4R325 110 aa6.97□□□□□ -1.29
UBR4-202ENST00000375224 MBD3L4A6NDZ8 208 aaPredicted RBP6.97□□□□□ -1.29
UBR4-202ENST00000375224 MBD3L3A6NE82 208 aaPredicted RBP6.97□□□□□ -1.29
UBR4-202ENST00000375224 MBD3L5A6NJ08 208 aaPredicted RBP6.97□□□□□ -1.29
UBR4-202ENST00000375224 LILRA1O75019 489 aa6.97□□□□□ -1.29
UBR4-202ENST00000375224 FBXO24O75426 580 aa6.97□□□□□ -1.29
UBR4-202ENST00000375224 DUSP1P28562 367 aa6.97□□□□□ -1.29
UBR4-202ENST00000375224 MZT1Q08AG7 82 aa6.97□□□□□ -1.29
UBR4-202ENST00000375224 PHLDA2Q53GA4 152 aa6.97□□□□□ -1.29
UBR4-202ENST00000375224 Q6ZS92 163 aa6.97□□□□□ -1.29
UBR4-202ENST00000375224 MBD3L2Q8NHZ7 208 aaPredicted RBP6.97□□□□□ -1.29
UBR4-202ENST00000375224 PLEKHA2Q9HB19 425 aa6.97□□□□□ -1.29
UBR4-202ENST00000375224 TMEM100Q9NV29 134 aa6.97□□□□□ -1.29
UBR4-202ENST00000375224 LPAR3Q9UBY5 353 aa6.97□□□□□ -1.29
UBR4-202ENST00000375224 MPPED1O15442 326 aa6.97□□□□□ -1.29
UBR4-202ENST00000375224 WDR1O75083 606 aa6.97□□□□□ -1.29
UBR4-202ENST00000375224 BRS3P32247 399 aa6.97□□□□□ -1.29
UBR4-202ENST00000375224 ZNF880Q6PDB4 577 aa6.97□□□□□ -1.29
UBR4-202ENST00000375224 BTNL3Q6UXE8 466 aa6.97□□□□□ -1.29
UBR4-202ENST00000375224 LHFPL4Q7Z7J7 247 aa6.97□□□□□ -1.29
UBR4-202ENST00000375224 WDR31Q8NA23 367 aa6.97□□□□□ -1.29
UBR4-202ENST00000375224 SCCPDHQ8NBX0 429 aa6.97□□□□□ -1.29
UBR4-202ENST00000375224 RAB39BQ96DA2 213 aa6.97□□□□□ -1.29
UBR4-202ENST00000375224 SAT2Q96F10 170 aaPredicted RBP6.97□□□□□ -1.29
UBR4-202ENST00000375224 OR5AC2Q9NZP5 309 aa6.97□□□□□ -1.29
UBR4-202ENST00000375224 POMT1Q9Y6A1 747 aa6.97□□□□□ -1.29
UBR4-202ENST00000375224 DUXBA0A1W2PPF3 345 aa6.96□□□□□ -1.29
UBR4-202ENST00000375224 A0A1W2PR80 420 aa6.96□□□□□ -1.29
UBR4-202ENST00000375224 K7ERU9 68 aa6.96□□□□□ -1.29
UBR4-202ENST00000375224 SH2D1BO14796 132 aa6.96□□□□□ -1.29
UBR4-202ENST00000375224 PHF1O43189 567 aaPredicted RBP6.96□□□□□ -1.29
UBR4-202ENST00000375224 TSPAN15O95858 294 aa6.96□□□□□ -1.29
UBR4-202ENST00000375224 UBE2G2P60604 165 aa6.96□□□□□ -1.29
UBR4-202ENST00000375224 PSG7Q13046 419 aa6.96□□□□□ -1.29
UBR4-202ENST00000375224 SPIN3Q5JUX0 258 aa6.96□□□□□ -1.29
UBR4-202ENST00000375224 CMTM1Q8IZ96 169 aa6.96□□□□□ -1.29
UBR4-202ENST00000375224 SNIP1Q8TAD8 396 aaKnown RBP6.96□□□□□ -1.29
UBR4-202ENST00000375224 ZNF596Q8TC21 504 aa6.96□□□□□ -1.29
UBR4-202ENST00000375224 MRPL30Q8TCC3 161 aaKnown RBP6.96□□□□□ -1.29
UBR4-202ENST00000375224 KLF14Q8TD94 323 aaPredicted RBP6.96□□□□□ -1.29
UBR4-202ENST00000375224 MRPL24Q96A35 216 aaKnown RBP6.96□□□□□ -1.29
UBR4-202ENST00000375224 C18orf12Q96KH6 178 aa6.96□□□□□ -1.29
UBR4-202ENST00000375224 HS3ST6Q96QI5 342 aa6.96□□□□□ -1.29
UBR4-202ENST00000375224 TAAR6Q96RI8 345 aa6.96□□□□□ -1.29
UBR4-202ENST00000375224 CFAP54Q96N23 3096 aa6.96□□□□□ -1.3
UBR4-202ENST00000375224 TRAV24A0A0B4J272 114 aa6.96□□□□□ -1.3
UBR4-202ENST00000375224 C3orf85A0A1B0GTC6 90 aa6.96□□□□□ -1.3
UBR4-202ENST00000375224 ZNF320A2RRD8 509 aa6.96□□□□□ -1.3
UBR4-202ENST00000375224 E5RGE8 158 aa6.96□□□□□ -1.3
UBR4-202ENST00000375224 J3KRW8 73 aa6.96□□□□□ -1.3
UBR4-202ENST00000375224 HS3ST1O14792 307 aa6.96□□□□□ -1.3
UBR4-202ENST00000375224 DEDDO75618 318 aa6.96□□□□□ -1.3
UBR4-202ENST00000375224 TUSC2O75896 110 aa6.96□□□□□ -1.3
UBR4-202ENST00000375224 SCGB1D2O95969 90 aa6.96□□□□□ -1.3
UBR4-202ENST00000375224 TRGC2P03986 189 aa6.96□□□□□ -1.3
UBR4-202ENST00000375224 SCTP09683 121 aa6.96□□□□□ -1.3
UBR4-202ENST00000375224 PGA5P0DJD9 388 aa6.96□□□□□ -1.3
UBR4-202ENST00000375224 HLA-DRB3P79483 266 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms