RNA–Protein interactions for RNA: ENST00000374358.4

TMEM50A-201, Transcript of transmembrane protein 50A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50A, Length 2,683 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50A-201ENST00000374358 MBNL3Q9NUK0 354 aaKnown RBP13.1□□□□□ -0.31
TMEM50A-201ENST00000374358 LIN7CQ9NUP9 197 aaKnown RBP13.1□□□□□ -0.31
TMEM50A-201ENST00000374358 IGHV3-43A0A0B4J1X8 118 aa13.09□□□□□ -0.31
TMEM50A-201ENST00000374358 BTBD17A6NE02 478 aa13.09□□□□□ -0.31
TMEM50A-201ENST00000374358 IGHV2-5P01817 119 aa13.09□□□□□ -0.31
TMEM50A-201ENST00000374358 IGHV3-43DP0DP04 118 aa13.09□□□□□ -0.31
TMEM50A-201ENST00000374358 ZNF787Q6DD87 383 aa13.09□□□□□ -0.31
TMEM50A-201ENST00000374358 BEND4Q6ZU67 534 aa13.09□□□□□ -0.31
TMEM50A-201ENST00000374358 OR8G5Q8NG78 346 aa13.09□□□□□ -0.31
TMEM50A-201ENST00000374358 TGIF2-C20orf24A0A0A6YYL0 155 aa13.09□□□□□ -0.31
TMEM50A-201ENST00000374358 SH2D1BO14796 132 aa13.09□□□□□ -0.31
TMEM50A-201ENST00000374358 HSPB1P04792 205 aaKnown RBP13.09□□□□□ -0.31
TMEM50A-201ENST00000374358 MDH2P40926 338 aaKnown RBP13.09□□□□□ -0.31
TMEM50A-201ENST00000374358 SCGB1C1Q8TD33 95 aa13.09□□□□□ -0.31
TMEM50A-201ENST00000374358 MRGPRDQ8TDS7 321 aa13.09□□□□□ -0.31
TMEM50A-201ENST00000374358 LSM10Q969L4 123 aaKnown RBP13.09□□□□□ -0.31
TMEM50A-201ENST00000374358 RCC1LQ96I51 464 aaKnown RBP13.09□□□□□ -0.31
TMEM50A-201ENST00000374358 OR4C12Q96R67 309 aa13.09□□□□□ -0.31
TMEM50A-201ENST00000374358 LOC102723971A0A1B0GUV8 181 aa13.08□□□□□ -0.31
TMEM50A-201ENST00000374358 CLDN1O95832 211 aa13.08□□□□□ -0.31
TMEM50A-201ENST00000374358 SSTR5P35346 364 aa13.08□□□□□ -0.31
TMEM50A-201ENST00000374358 TNFSF10P50591 281 aa13.08□□□□□ -0.31
TMEM50A-201ENST00000374358 CCL11P51671 97 aa13.08□□□□□ -0.31
TMEM50A-201ENST00000374358 ALKBH2Q6NS38 261 aa13.08□□□□□ -0.31
TMEM50A-201ENST00000374358 MOB1BQ7L9L4 216 aa13.08□□□□□ -0.31
TMEM50A-201ENST00000374358 RFESDQ8TAC1 157 aa13.08□□□□□ -0.31
TMEM50A-201ENST00000374358 GMPPAQ96IJ6 420 aaPredicted RBP13.08□□□□□ -0.31
TMEM50A-201ENST00000374358 NIPSNAP3BQ9BS92 247 aa13.08□□□□□ -0.31
TMEM50A-201ENST00000374358 CLN8Q9UBY8 286 aa13.08□□□□□ -0.31
TMEM50A-201ENST00000374358 DEFB108AA8MXU0 73 aa13.08□□□□□ -0.32
TMEM50A-201ENST00000374358 SLC25A6P12236 298 aa13.08□□□□□ -0.32
TMEM50A-201ENST00000374358 DEFA4P12838 97 aa13.08□□□□□ -0.32
TMEM50A-201ENST00000374358 ELOBQ15370 118 aa13.08□□□□□ -0.32
TMEM50A-201ENST00000374358 LTC4SQ16873 150 aa13.08□□□□□ -0.32
TMEM50A-201ENST00000374358 DCTN5Q9BTE1 182 aa13.08□□□□□ -0.32
TMEM50A-201ENST00000374358 CLN5O75503 358 aa13.07□□□□□ -0.32
TMEM50A-201ENST00000374358 YIF1AO95070 293 aa13.07□□□□□ -0.32
TMEM50A-201ENST00000374358 IGKV1D-33P01593 117 aa13.07□□□□□ -0.32
TMEM50A-201ENST00000374358 IGKV1-33P01594 117 aa13.07□□□□□ -0.32
TMEM50A-201ENST00000374358 GABRA2P47869 451 aa13.07□□□□□ -0.32
TMEM50A-201ENST00000374358 FABP6P51161 128 aa13.07□□□□□ -0.32
TMEM50A-201ENST00000374358 MRPL49Q13405 166 aaKnown RBP13.07□□□□□ -0.32
TMEM50A-201ENST00000374358 GABRA6Q16445 453 aa13.07□□□□□ -0.32
TMEM50A-201ENST00000374358 FAM90A2PQ658T7 463 aa13.07□□□□□ -0.32
TMEM50A-201ENST00000374358 C11orf53Q8IXP5 236 aa13.07□□□□□ -0.32
TMEM50A-201ENST00000374358 Q8IYB0 196 aa13.07□□□□□ -0.32
TMEM50A-201ENST00000374358 FDCSPQ8NFU4 85 aa13.07□□□□□ -0.32
TMEM50A-201ENST00000374358 ZDHHC16Q969W1 377 aa13.07□□□□□ -0.32
TMEM50A-201ENST00000374358 RBMXL1Q96E39 390 aaKnown RBP13.07□□□□□ -0.32
TMEM50A-201ENST00000374358 SMDT1Q9H4I9 107 aa13.07□□□□□ -0.32
TMEM50A-201ENST00000374358 TREM2Q9NZC2 230 aa13.07□□□□□ -0.32
TMEM50A-201ENST00000374358 WIPI2Q9Y4P8 454 aa13.07□□□□□ -0.32
TMEM50A-201ENST00000374358 IQCF6A8MYZ5 107 aa13.07□□□□□ -0.32
TMEM50A-201ENST00000374358 S1PR2O95136 353 aa13.07□□□□□ -0.32
TMEM50A-201ENST00000374358 PTBP3O95758 552 aaKnown RBP13.07□□□□□ -0.32
TMEM50A-201ENST00000374358 BRWD1-AS2P59051 145 aa13.07□□□□□ -0.32
TMEM50A-201ENST00000374358 FOXF2Q12947 444 aa13.07□□□□□ -0.32
TMEM50A-201ENST00000374358 COQ2Q96H96 371 aa13.07□□□□□ -0.32
TMEM50A-201ENST00000374358 RBKSQ9H477 322 aa13.07□□□□□ -0.32
TMEM50A-201ENST00000374358 CLCF1Q9UBD9 225 aa13.07□□□□□ -0.32
TMEM50A-201ENST00000374358 OTOGLQ3ZCN5 2332 aa13.07□□□□□ -0.32
TMEM50A-201ENST00000374358 C17orf98A8MV24 154 aa13.06□□□□□ -0.32
TMEM50A-201ENST00000374358 HBZP02008 142 aa13.06□□□□□ -0.32
TMEM50A-201ENST00000374358 RAC2P15153 192 aa13.06□□□□□ -0.32
TMEM50A-201ENST00000374358 RAB2AP61019 212 aa13.06□□□□□ -0.32
TMEM50A-201ENST00000374358 TGFBR3Q03167 851 aa13.06□□□□□ -0.32
TMEM50A-201ENST00000374358 TMEM178AQ8NBL3 297 aa13.06□□□□□ -0.32
TMEM50A-201ENST00000374358 TVP23CQ96ET8 276 aa13.06□□□□□ -0.32
TMEM50A-201ENST00000374358 METTL1Q9UBP6 276 aaKnown RBP13.06□□□□□ -0.32
TMEM50A-201ENST00000374358 HBE1P02100 147 aa13.06□□□□□ -0.32
TMEM50A-201ENST00000374358 WT1P19544 449 aaPredicted RBP13.06□□□□□ -0.32
TMEM50A-201ENST00000374358 IL2RGP31785 369 aa13.06□□□□□ -0.32
TMEM50A-201ENST00000374358 GLIPR1P48060 266 aa13.06□□□□□ -0.32
TMEM50A-201ENST00000374358 SLC38A11Q08AI6 406 aa13.06□□□□□ -0.32
TMEM50A-201ENST00000374358 FAM214BQ7L5A3 538 aa13.06□□□□□ -0.32
TMEM50A-201ENST00000374358 SSX3Q99909 188 aa13.06□□□□□ -0.32
TMEM50A-201ENST00000374358 UNKLQ9H9P5 680 aaKnown RBP13.06□□□□□ -0.32
TMEM50A-201ENST00000374358 NIT2Q9NQR4 276 aa13.06□□□□□ -0.32
TMEM50A-201ENST00000374358 ATMQ13315 3056 aa13.06□□□□□ -0.32
TMEM50A-201ENST00000374358 IGHV3-13P01766 116 aa13.06□□□□□ -0.32
TMEM50A-201ENST00000374358 IGHV3-7P01780 117 aa13.06□□□□□ -0.32
TMEM50A-201ENST00000374358 BCL2P10415 239 aa13.06□□□□□ -0.32
TMEM50A-201ENST00000374358 CD200P41217 278 aa13.06□□□□□ -0.32
TMEM50A-201ENST00000374358 TNFRSF9Q07011 255 aa13.06□□□□□ -0.32
TMEM50A-201ENST00000374358 KIAA0141Q14154 515 aaPredicted RBP13.06□□□□□ -0.32
TMEM50A-201ENST00000374358 ZNF674Q2M3X9 581 aa13.06□□□□□ -0.32
TMEM50A-201ENST00000374358 LRRC75BQ2VPJ9 315 aa13.06□□□□□ -0.32
TMEM50A-201ENST00000374358 KHDC3LQ587J8 217 aa13.06□□□□□ -0.32
TMEM50A-201ENST00000374358 C9orf106Q8NAJ2 232 aa13.06□□□□□ -0.32
TMEM50A-201ENST00000374358 GALMQ96C23 342 aa13.06□□□□□ -0.32
TMEM50A-201ENST00000374358 WDR61Q9GZS3 305 aaKnown RBP13.06□□□□□ -0.32
TMEM50A-201ENST00000374358 TMPRSS5Q9H3S3 457 aa13.06□□□□□ -0.32
TMEM50A-201ENST00000374358 ODAMA1E959 279 aa13.05□□□□□ -0.32
TMEM50A-201ENST00000374358 OR5H1A6NKK0 313 aa13.05□□□□□ -0.32
TMEM50A-201ENST00000374358 AP4M1O00189 453 aa13.05□□□□□ -0.32
TMEM50A-201ENST00000374358 ZNF645Q8N7E2 425 aa13.05□□□□□ -0.32
TMEM50A-201ENST00000374358 MALSU1Q96EH3 234 aa13.05□□□□□ -0.32
TMEM50A-201ENST00000374358 KCNIP1Q9NZI2 227 aa13.05□□□□□ -0.32
TMEM50A-201ENST00000374358 DMXL2Q8TDJ6 3036 aa13.05□□□□□ -0.32
TMEM50A-201ENST00000374358 TMEM30CPA0ZSE6 113 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms