RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 TAF1LQ8IZX4 1826 aa12.44□□□□□ -0.42
TRAF1-201ENST00000373887 ZNF488Q96MN9 340 aa12.44□□□□□ -0.42
TRAF1-201ENST00000373887 IGHV3-72A0A0B4J1Y9 119 aa12.44□□□□□ -0.42
TRAF1-201ENST00000373887 A0A1W2PPC1 479 aa12.44□□□□□ -0.42
TRAF1-201ENST00000373887 LMX1BO60663 402 aa12.44□□□□□ -0.42
TRAF1-201ENST00000373887 C1QCP02747 245 aa12.44□□□□□ -0.42
TRAF1-201ENST00000373887 GALP22466 123 aa12.44□□□□□ -0.42
TRAF1-201ENST00000373887 FAM74A3Q4VXF1 159 aa12.44□□□□□ -0.42
TRAF1-201ENST00000373887 LOC101059948A0A1B0GTJ6 334 aa12.43□□□□□ -0.42
TRAF1-201ENST00000373887 UPK3AO75631 287 aa12.43□□□□□ -0.42
TRAF1-201ENST00000373887 FADS6Q8N9I5 356 aa12.43□□□□□ -0.42
TRAF1-201ENST00000373887 IGKV1-8A0A0C4DH67 115 aa12.43□□□□□ -0.42
TRAF1-201ENST00000373887 SS18L1O75177 396 aaPredicted RBP12.43□□□□□ -0.42
TRAF1-201ENST00000373887 PPP1R17O96001 155 aa12.43□□□□□ -0.42
TRAF1-201ENST00000373887 NUBP1P53384 320 aa12.43□□□□□ -0.42
TRAF1-201ENST00000373887 RAG2P55895 527 aa12.43□□□□□ -0.42
TRAF1-201ENST00000373887 ZNF273Q14593 569 aa12.43□□□□□ -0.42
TRAF1-201ENST00000373887 OR10J6PQ8NGY7 276 aa12.43□□□□□ -0.42
TRAF1-201ENST00000373887 SIRT7Q9NRC8 400 aa12.43□□□□□ -0.42
TRAF1-201ENST00000373887 A0A1W2PQM1 296 aa12.43□□□□□ -0.42
TRAF1-201ENST00000373887 PRSS2P07478 247 aa12.43□□□□□ -0.42
TRAF1-201ENST00000373887 LGALS3P17931 250 aaKnown RBP12.43□□□□□ -0.42
TRAF1-201ENST00000373887 NUP37Q8NFH4 326 aa12.43□□□□□ -0.42
TRAF1-201ENST00000373887 OR1L8Q8NGR8 309 aa12.43□□□□□ -0.42
TRAF1-201ENST00000373887 KLK15Q9H2R5 256 aa12.43□□□□□ -0.42
TRAF1-201ENST00000373887 RNF122Q9H9V4 155 aa12.43□□□□□ -0.42
TRAF1-201ENST00000373887 SLC25A10Q9UBX3 287 aaPredicted RBP12.43□□□□□ -0.42
TRAF1-201ENST00000373887 OR2W1Q9Y3N9 320 aa12.43□□□□□ -0.42
TRAF1-201ENST00000373887 XIRP1Q702N8 1843 aaKnown RBP12.43□□□□□ -0.42
TRAF1-201ENST00000373887 UBE2V2Q15819 145 aa12.43□□□□□ -0.42
TRAF1-201ENST00000373887 SYT8Q8NBV8 401 aa12.43□□□□□ -0.42
TRAF1-201ENST00000373887 PGLYRP4Q96LB8 373 aa12.43□□□□□ -0.42
TRAF1-201ENST00000373887 FOXC2Q99958 501 aa12.43□□□□□ -0.42
TRAF1-201ENST00000373887 CKS2P33552 79 aa12.43□□□□□ -0.42
TRAF1-201ENST00000373887 SCAND1P57086 179 aa12.43□□□□□ -0.42
TRAF1-201ENST00000373887 OVCH2Q7RTZ1 564 aa12.43□□□□□ -0.42
TRAF1-201ENST00000373887 ARFGEF1Q9Y6D6 1849 aa12.42□□□□□ -0.42
TRAF1-201ENST00000373887 A0A0J9YW62 118 aa12.42□□□□□ -0.42
TRAF1-201ENST00000373887 SIAH2O43255 324 aa12.42□□□□□ -0.42
TRAF1-201ENST00000373887 VDAC1P21796 283 aa12.42□□□□□ -0.42
TRAF1-201ENST00000373887 MEIG1Q5JSS6 88 aa12.42□□□□□ -0.42
TRAF1-201ENST00000373887 SLC25A42Q86VD7 318 aa12.42□□□□□ -0.42
TRAF1-201ENST00000373887 RHOVQ96L33 236 aa12.42□□□□□ -0.42
TRAF1-201ENST00000373887 GPA33Q99795 319 aa12.42□□□□□ -0.42
TRAF1-201ENST00000373887 DDA1Q9BW61 102 aa12.42□□□□□ -0.42
TRAF1-201ENST00000373887 GPR6P46095 362 aaPredicted RBP12.42□□□□□ -0.42
TRAF1-201ENST00000373887 SMAGPQ0VAQ4 97 aa12.42□□□□□ -0.42
TRAF1-201ENST00000373887 WDR25Q64LD2 544 aaPredicted RBP12.42□□□□□ -0.42
TRAF1-201ENST00000373887 LSMEM1Q8N8F7 131 aa12.42□□□□□ -0.42
TRAF1-201ENST00000373887 MS4A3Q96HJ5 214 aa12.42□□□□□ -0.42
TRAF1-201ENST00000373887 HAX1O00165 279 aa12.42□□□□□ -0.42
TRAF1-201ENST00000373887 TMEM78Q5T7P6 136 aa12.42□□□□□ -0.42
TRAF1-201ENST00000373887 CLEC2AQ6UVW9 174 aa12.42□□□□□ -0.42
TRAF1-201ENST00000373887 TPRX1Q8N7U7 411 aa12.42□□□□□ -0.42
TRAF1-201ENST00000373887 SGMS2Q8NHU3 365 aa12.42□□□□□ -0.42
TRAF1-201ENST00000373887 CTXND1A0A1B0GTU2 59 aa12.42□□□□□ -0.42
TRAF1-201ENST00000373887 SIGLEC5O15389 551 aa12.42□□□□□ -0.42
TRAF1-201ENST00000373887 RP1L1Q8IWN7 2480 aaPredicted RBP12.42□□□□□ -0.42
TRAF1-201ENST00000373887 TRAV8-7A0A075B6U6 113 aa12.42□□□□□ -0.42
TRAF1-201ENST00000373887 ATP6V0CP27449 155 aa12.42□□□□□ -0.42
TRAF1-201ENST00000373887 C9orf62Q8N4C0 152 aa12.42□□□□□ -0.42
TRAF1-201ENST00000373887 NRXN2Q9P2S2 1712 aa12.41□□□□□ -0.42
TRAF1-201ENST00000373887 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.41□□□□□ -0.42
TRAF1-201ENST00000373887 BGLAPP02818 100 aa12.41□□□□□ -0.42
TRAF1-201ENST00000373887 RUNX1Q01196 453 aa12.41□□□□□ -0.42
TRAF1-201ENST00000373887 C2orf83Q53S99 150 aa12.41□□□□□ -0.42
TRAF1-201ENST00000373887 CACNA1CQ13936 2221 aa12.41□□□□□ -0.42
TRAF1-201ENST00000373887 RGPD3A6NKT7 1758 aaPredicted RBP12.41□□□□□ -0.42
TRAF1-201ENST00000373887 PCMT1P22061 227 aa12.41□□□□□ -0.42
TRAF1-201ENST00000373887 HOXA6P31267 233 aa12.41□□□□□ -0.42
TRAF1-201ENST00000373887 ERVFRD-1P60508 538 aa12.41□□□□□ -0.42
TRAF1-201ENST00000373887 DMKNQ6E0U4 476 aaPredicted RBP12.41□□□□□ -0.42
TRAF1-201ENST00000373887 ABHD14BQ96IU4 210 aa12.41□□□□□ -0.42
TRAF1-201ENST00000373887 GUCD1Q96NT3 240 aa12.41□□□□□ -0.42
TRAF1-201ENST00000373887 DMRTA2Q96SC8 542 aa12.41□□□□□ -0.42
TRAF1-201ENST00000373887 MS4A5Q9H3V2 200 aa12.41□□□□□ -0.42
TRAF1-201ENST00000373887 SOX21Q9Y651 276 aaPredicted RBP12.41□□□□□ -0.42
TRAF1-201ENST00000373887 ZNFX1Q9P2E3 1918 aaKnown RBP12.41□□□□□ -0.42
TRAF1-201ENST00000373887 NPIPB6E9PJ23 425 aa12.41□□□□□ -0.42
TRAF1-201ENST00000373887 HYPMO75409 117 aa12.41□□□□□ -0.42
TRAF1-201ENST00000373887 TIAF1O95411 115 aa12.41□□□□□ -0.42
TRAF1-201ENST00000373887 GZMHP20718 246 aa12.41□□□□□ -0.42
TRAF1-201ENST00000373887 PLPPR5Q32ZL2 321 aa12.41□□□□□ -0.42
TRAF1-201ENST00000373887 OR13C6PQ8NH95 151 aa12.41□□□□□ -0.42
TRAF1-201ENST00000373887 NEU1Q99519 415 aa12.41□□□□□ -0.42
TRAF1-201ENST00000373887 OR2A4O95047 310 aa12.41□□□□□ -0.42
TRAF1-201ENST00000373887 CLDN14O95500 239 aa12.41□□□□□ -0.42
TRAF1-201ENST00000373887 FHL5Q5TD97 284 aa12.41□□□□□ -0.42
TRAF1-201ENST00000373887 OR2A7Q96R45 310 aa12.41□□□□□ -0.42
TRAF1-201ENST00000373887 V9GYH0 126 aa12.41□□□□□ -0.42
TRAF1-201ENST00000373887 FAM3BP58499 235 aaPredicted RBP12.4□□□□□ -0.42
TRAF1-201ENST00000373887 C7orf71A4D174 169 aa12.4□□□□□ -0.42
TRAF1-201ENST00000373887 FAM74A7A6NL05 159 aa12.4□□□□□ -0.42
TRAF1-201ENST00000373887 SSTR5P35346 364 aa12.4□□□□□ -0.42
TRAF1-201ENST00000373887 HCP5Q6MZN7 132 aa12.4□□□□□ -0.42
TRAF1-201ENST00000373887 CYB561D1Q8N8Q1 229 aa12.4□□□□□ -0.42
TRAF1-201ENST00000373887 OR4C13Q8NGP0 309 aa12.4□□□□□ -0.42
TRAF1-201ENST00000373887 PARD6GQ9BYG4 376 aaPredicted RBP12.4□□□□□ -0.42
TRAF1-201ENST00000373887 PF4V1P10720 104 aa12.4□□□□□ -0.42
TRAF1-201ENST00000373887 NAT2P11245 290 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms