RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 GAMTQ14353 236 aa9.73□□□□□ -0.85
TSPAN1-201ENST00000372003 SNAI3Q3KNW1 292 aa9.73□□□□□ -0.85
TSPAN1-201ENST00000372003 RIPPLY2Q5TAB7 128 aa9.73□□□□□ -0.85
TSPAN1-201ENST00000372003 TBC1D26Q86UD7 250 aa9.73□□□□□ -0.85
TSPAN1-201ENST00000372003 ODF3L1Q8IXM7 274 aa9.73□□□□□ -0.85
TSPAN1-201ENST00000372003 C20orf196Q8IYI0 205 aa9.73□□□□□ -0.85
TSPAN1-201ENST00000372003 PACRGQ96M98 296 aaPredicted RBP9.73□□□□□ -0.85
TSPAN1-201ENST00000372003 SPOCK3Q9BQ16 436 aa9.73□□□□□ -0.85
TSPAN1-201ENST00000372003 ST3GAL6Q9Y274 331 aa9.73□□□□□ -0.85
TSPAN1-201ENST00000372003 A0A1B0GV50 99 aa9.72□□□□□ -0.85
TSPAN1-201ENST00000372003 LRP5LA4QPB2 252 aa9.72□□□□□ -0.85
TSPAN1-201ENST00000372003 ADAM20O43506 726 aa9.72□□□□□ -0.85
TSPAN1-201ENST00000372003 TUSC2O75896 110 aa9.72□□□□□ -0.85
TSPAN1-201ENST00000372003 GCGP01275 180 aa9.72□□□□□ -0.85
TSPAN1-201ENST00000372003 TK1P04183 234 aa9.72□□□□□ -0.85
TSPAN1-201ENST00000372003 BMP5P22003 454 aa9.72□□□□□ -0.85
TSPAN1-201ENST00000372003 S100GP29377 79 aa9.72□□□□□ -0.85
TSPAN1-201ENST00000372003 SERF2P84101 59 aa9.72□□□□□ -0.85
TSPAN1-201ENST00000372003 SRSF1Q07955 248 aaKnown RBP eCLIP9.72□□□□□ -0.85
TSPAN1-201ENST00000372003 PHYHD1Q5SRE7 291 aa9.72□□□□□ -0.85
TSPAN1-201ENST00000372003 MRGPRGQ86SM5 289 aa9.72□□□□□ -0.85
TSPAN1-201ENST00000372003 SAXO1Q8IYX7 474 aa9.72□□□□□ -0.85
TSPAN1-201ENST00000372003 OR1F12Q8NHA8 337 aa9.72□□□□□ -0.85
TSPAN1-201ENST00000372003 PLPPR1Q8TBJ4 325 aa9.72□□□□□ -0.85
TSPAN1-201ENST00000372003 GMPPAQ96IJ6 420 aaPredicted RBP9.72□□□□□ -0.85
TSPAN1-201ENST00000372003 HIST1H2BLQ99880 126 aa9.72□□□□□ -0.85
TSPAN1-201ENST00000372003 ULBP2Q9BZM5 246 aa9.72□□□□□ -0.85
TSPAN1-201ENST00000372003 C12orf49Q9H741 205 aa9.72□□□□□ -0.85
TSPAN1-201ENST00000372003 VAX2Q9UIW0 290 aa9.72□□□□□ -0.85
TSPAN1-201ENST00000372003 ZGRF1Q86YA3 2104 aa9.72□□□□□ -0.85
TSPAN1-201ENST00000372003 IGKV1-12A0A0C4DH73 117 aa9.71□□□□□ -0.85
TSPAN1-201ENST00000372003 KIR2DS1A0A191URI9 304 aa9.71□□□□□ -0.85
TSPAN1-201ENST00000372003 ZNF716A6NP11 495 aa9.71□□□□□ -0.85
TSPAN1-201ENST00000372003 IGKV1D-12P01611 117 aa9.71□□□□□ -0.85
TSPAN1-201ENST00000372003 RD3LP0DJH9 198 aa9.71□□□□□ -0.85
TSPAN1-201ENST00000372003 FABP4P15090 132 aa9.71□□□□□ -0.85
TSPAN1-201ENST00000372003 IL2RGP31785 369 aa9.71□□□□□ -0.85
TSPAN1-201ENST00000372003 KIR2DL2P43627 348 aaPredicted RBP9.71□□□□□ -0.85
TSPAN1-201ENST00000372003 KIR2DS4P43632 304 aa9.71□□□□□ -0.85
TSPAN1-201ENST00000372003 KIR2DS1Q14954 304 aa9.71□□□□□ -0.85
TSPAN1-201ENST00000372003 MPV17LQ2QL34 196 aa9.71□□□□□ -0.85
TSPAN1-201ENST00000372003 ABLIM2Q6H8Q1 611 aa9.71□□□□□ -0.85
TSPAN1-201ENST00000372003 VWA1Q6PCB0 445 aa9.71□□□□□ -0.85
TSPAN1-201ENST00000372003 FAM214BQ7L5A3 538 aa9.71□□□□□ -0.85
TSPAN1-201ENST00000372003 OR10A7Q8NGE5 316 aa9.71□□□□□ -0.85
TSPAN1-201ENST00000372003 CA5BP1Q8WTZ4 195 aa9.71□□□□□ -0.85
TSPAN1-201ENST00000372003 PINX1Q96BK5 328 aaKnown RBP9.71□□□□□ -0.85
TSPAN1-201ENST00000372003 ACY3Q96HD9 319 aa9.71□□□□□ -0.85
TSPAN1-201ENST00000372003 RBM24Q9BX46 236 aaKnown RBP9.71□□□□□ -0.85
TSPAN1-201ENST00000372003 RIMS4Q9H426 269 aaPredicted RBP9.71□□□□□ -0.85
TSPAN1-201ENST00000372003 Q9N2K0 584 aa9.71□□□□□ -0.85
TSPAN1-201ENST00000372003 RNF115Q9Y4L5 304 aa9.71□□□□□ -0.85
TSPAN1-201ENST00000372003 URGCP-MRPS24S4R325 110 aa9.71□□□□□ -0.85
TSPAN1-201ENST00000372003 RP1L1Q8IWN7 2480 aaPredicted RBP9.71□□□□□ -0.85
TSPAN1-201ENST00000372003 ZNF816-ZNF321PA0A0X1KG74 233 aa9.71□□□□□ -0.86
TSPAN1-201ENST00000372003 hCG_38984A0A1B0GV85 526 aa9.71□□□□□ -0.86
TSPAN1-201ENST00000372003 OR6C6A6NF89 314 aa9.71□□□□□ -0.86
TSPAN1-201ENST00000372003 FAM90A27PA6NNH2 459 aa9.71□□□□□ -0.86
TSPAN1-201ENST00000372003 SS18L1O75177 396 aaPredicted RBP9.71□□□□□ -0.86
TSPAN1-201ENST00000372003 TNFSF13O75888 250 aa9.71□□□□□ -0.86
TSPAN1-201ENST00000372003 LY86O95711 162 aa9.71□□□□□ -0.86
TSPAN1-201ENST00000372003 RNF224P0DH78 156 aa9.71□□□□□ -0.86
TSPAN1-201ENST00000372003 CHRNB4P30926 498 aa9.71□□□□□ -0.86
TSPAN1-201ENST00000372003 ASCL1P50553 236 aa9.71□□□□□ -0.86
TSPAN1-201ENST00000372003 PAX9P55771 341 aa9.71□□□□□ -0.86
TSPAN1-201ENST00000372003 SPCS3P61009 180 aa9.71□□□□□ -0.86
TSPAN1-201ENST00000372003 HNF4GQ14541 408 aa9.71□□□□□ -0.86
TSPAN1-201ENST00000372003 CDSNQ15517 529 aa9.71□□□□□ -0.86
TSPAN1-201ENST00000372003 PIGYQ3MUY2 71 aa9.71□□□□□ -0.86
TSPAN1-201ENST00000372003 DMRTC1Q5HYR2 192 aa9.71□□□□□ -0.86
TSPAN1-201ENST00000372003 CXorf66Q5JRM2 361 aaPredicted RBP9.71□□□□□ -0.86
TSPAN1-201ENST00000372003 ZNF787Q6DD87 383 aa9.71□□□□□ -0.86
TSPAN1-201ENST00000372003 CDPF1Q6NVV7 123 aa9.71□□□□□ -0.86
TSPAN1-201ENST00000372003 SLC25A26Q70HW3 274 aa9.71□□□□□ -0.86
TSPAN1-201ENST00000372003 NUFIP2Q7Z417 695 aaKnown RBP9.71□□□□□ -0.86
TSPAN1-201ENST00000372003 CENPVQ7Z7K6 275 aaPredicted RBP9.71□□□□□ -0.86
TSPAN1-201ENST00000372003 SCGB1C1Q8TD33 95 aa9.71□□□□□ -0.86
TSPAN1-201ENST00000372003 CABLES2Q9BTV7 478 aa9.71□□□□□ -0.86
TSPAN1-201ENST00000372003 ZNF442Q9H7R0 627 aa9.71□□□□□ -0.86
TSPAN1-201ENST00000372003 SLC7A10Q9NS82 523 aa9.71□□□□□ -0.86
TSPAN1-201ENST00000372003 POLEQ07864 2286 aa9.7□□□□□ -0.86
TSPAN1-201ENST00000372003 GTF3C1Q12789 2109 aa9.7□□□□□ -0.86
TSPAN1-201ENST00000372003 ESPL1Q14674 2120 aa9.7□□□□□ -0.86
TSPAN1-201ENST00000372003 NCOA6Q14686 2063 aaPredicted RBP9.7□□□□□ -0.86
TSPAN1-201ENST00000372003 A0A1B0GV90 55 aa9.7□□□□□ -0.86
TSPAN1-201ENST00000372003 CHST1O43916 411 aa9.7□□□□□ -0.86
TSPAN1-201ENST00000372003 NAPSAO96009 420 aa9.7□□□□□ -0.86
TSPAN1-201ENST00000372003 EPHA1P21709 976 aa9.7□□□□□ -0.86
TSPAN1-201ENST00000372003 OMGP23515 440 aa9.7□□□□□ -0.86
TSPAN1-201ENST00000372003 PDLIM4P50479 330 aa9.7□□□□□ -0.86
TSPAN1-201ENST00000372003 CEBPGP53567 150 aa9.7□□□□□ -0.86
TSPAN1-201ENST00000372003 PCBD1P61457 104 aa9.7□□□□□ -0.86
TSPAN1-201ENST00000372003 RAB11AP62491 216 aa9.7□□□□□ -0.86
TSPAN1-201ENST00000372003 GFI1BQ5VTD9 330 aa9.7□□□□□ -0.86
TSPAN1-201ENST00000372003 BEND4Q6ZU67 534 aa9.7□□□□□ -0.86
TSPAN1-201ENST00000372003 ITLN2Q8WWU7 325 aaPredicted RBP9.7□□□□□ -0.86
TSPAN1-201ENST00000372003 SPSB4Q96A44 273 aa9.7□□□□□ -0.86
TSPAN1-201ENST00000372003 STARD4Q96DR4 205 aa9.7□□□□□ -0.86
TSPAN1-201ENST00000372003 ZNF385AQ96PM9 386 aaKnown RBP9.7□□□□□ -0.86
TSPAN1-201ENST00000372003 NDUFAF3Q9BU61 184 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms