RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 Q8NFD4 153 aa9.89□□□□□ -0.83
PDE6C-201ENST00000371447 RIMS4Q9H426 269 aaPredicted RBP9.89□□□□□ -0.83
PDE6C-201ENST00000371447 CACFD1Q9UGQ2 172 aa9.89□□□□□ -0.83
PDE6C-201ENST00000371447 H7C2Y5 167 aa9.88□□□□□ -0.83
PDE6C-201ENST00000371447 TMEM11P17152 192 aa9.88□□□□□ -0.83
PDE6C-201ENST00000371447 EGR1P18146 543 aa9.88□□□□□ -0.83
PDE6C-201ENST00000371447 EIF2S3P41091 472 aaKnown RBP9.88□□□□□ -0.83
PDE6C-201ENST00000371447 ERVFRD-1P60508 538 aa9.88□□□□□ -0.83
PDE6C-201ENST00000371447 TCF15Q12870 199 aa9.88□□□□□ -0.83
PDE6C-201ENST00000371447 NMSQ5H8A3 153 aa9.88□□□□□ -0.83
PDE6C-201ENST00000371447 GPR157Q5UAW9 335 aa9.88□□□□□ -0.83
PDE6C-201ENST00000371447 BTNL8Q6UX41 500 aa9.88□□□□□ -0.83
PDE6C-201ENST00000371447 WDR82Q6UXN9 313 aa9.88□□□□□ -0.83
PDE6C-201ENST00000371447 ZNF497Q6ZNH5 498 aa9.88□□□□□ -0.83
PDE6C-201ENST00000371447 TGIF2LYQ8IUE0 185 aa9.88□□□□□ -0.83
PDE6C-201ENST00000371447 LRTM2Q8N967 370 aa9.88□□□□□ -0.83
PDE6C-201ENST00000371447 TMEM56Q96MV1 263 aa9.88□□□□□ -0.83
PDE6C-201ENST00000371447 GLS2Q9UI32 602 aa9.88□□□□□ -0.83
PDE6C-201ENST00000371447 TMEM56-RWDD3S4R434 201 aa9.88□□□□□ -0.83
PDE6C-201ENST00000371447 ZNF891A8MT65 544 aaPredicted RBP9.88□□□□□ -0.83
PDE6C-201ENST00000371447 IGHG3P01860 377 aa9.88□□□□□ -0.83
PDE6C-201ENST00000371447 CD55P08174 381 aa9.88□□□□□ -0.83
PDE6C-201ENST00000371447 DEFA4P12838 97 aa9.88□□□□□ -0.83
PDE6C-201ENST00000371447 RPL30P62888 115 aaKnown RBP9.88□□□□□ -0.83
PDE6C-201ENST00000371447 AKR1C8PQ5T2L2 129 aa9.88□□□□□ -0.83
PDE6C-201ENST00000371447 C16orf54Q6UWD8 224 aa9.88□□□□□ -0.83
PDE6C-201ENST00000371447 SAT2Q96F10 170 aaPredicted RBP9.88□□□□□ -0.83
PDE6C-201ENST00000371447 C14orf79Q96F83 325 aa9.88□□□□□ -0.83
PDE6C-201ENST00000371447 PSENENQ9NZ42 101 aa9.88□□□□□ -0.83
PDE6C-201ENST00000371447 CLN8Q9UBY8 286 aa9.88□□□□□ -0.83
PDE6C-201ENST00000371447 TMEM30CPA0ZSE6 113 aa9.87□□□□□ -0.83
PDE6C-201ENST00000371447 H0Y980 276 aa9.87□□□□□ -0.83
PDE6C-201ENST00000371447 SNAPINO95295 136 aa9.87□□□□□ -0.83
PDE6C-201ENST00000371447 IGKV1-5P01602 117 aa9.87□□□□□ -0.83
PDE6C-201ENST00000371447 DUX4L9Q6RFH8 374 aaPredicted RBP9.87□□□□□ -0.83
PDE6C-201ENST00000371447 ZNF474Q6S9Z5 364 aaPredicted RBP9.87□□□□□ -0.83
PDE6C-201ENST00000371447 UQCC3Q6UW78 93 aa9.87□□□□□ -0.83
PDE6C-201ENST00000371447 IL34Q6ZMJ4 242 aa9.87□□□□□ -0.83
PDE6C-201ENST00000371447 FGFRL1Q8N441 504 aa9.87□□□□□ -0.83
PDE6C-201ENST00000371447 CLRN3Q8NCR9 226 aa9.87□□□□□ -0.83
PDE6C-201ENST00000371447 NANPQ8TBE9 248 aa9.87□□□□□ -0.83
PDE6C-201ENST00000371447 RXFP4Q8TDU9 374 aa9.87□□□□□ -0.83
PDE6C-201ENST00000371447 MUCL1Q96DR8 90 aa9.87□□□□□ -0.83
PDE6C-201ENST00000371447 YLPM1P49750 1951 aaKnown RBP9.87□□□□□ -0.83
PDE6C-201ENST00000371447 ZFP92A6NM28 416 aa9.87□□□□□ -0.83
PDE6C-201ENST00000371447 IQCF6A8MYZ5 107 aa9.87□□□□□ -0.83
PDE6C-201ENST00000371447 AQP7O14520 342 aa9.87□□□□□ -0.83
PDE6C-201ENST00000371447 CRYAAP02489 173 aa9.87□□□□□ -0.83
PDE6C-201ENST00000371447 PEA15Q15121 130 aa9.87□□□□□ -0.83
PDE6C-201ENST00000371447 UTF1Q5T230 341 aa9.87□□□□□ -0.83
PDE6C-201ENST00000371447 C11orf53Q8IXP5 236 aa9.87□□□□□ -0.83
PDE6C-201ENST00000371447 OR2V2Q96R30 315 aa9.87□□□□□ -0.83
PDE6C-201ENST00000371447 CLCC1Q96S66 551 aa9.87□□□□□ -0.83
PDE6C-201ENST00000371447 SLC25A31Q9H0C2 315 aa9.87□□□□□ -0.83
PDE6C-201ENST00000371447 CHD3Q12873 2000 aaKnown RBP9.87□□□□□ -0.83
PDE6C-201ENST00000371447 UMAD1C9J7I0 102 aa9.87□□□□□ -0.83
PDE6C-201ENST00000371447 NDUFA2O43678 99 aa9.87□□□□□ -0.83
PDE6C-201ENST00000371447 SOX15O60248 233 aa9.87□□□□□ -0.83
PDE6C-201ENST00000371447 GAPDHP04406 335 aaKnown RBP9.87□□□□□ -0.83
PDE6C-201ENST00000371447 DANCRP0C864 163 aa9.87□□□□□ -0.83
PDE6C-201ENST00000371447 SPP1P10451 314 aa9.87□□□□□ -0.83
PDE6C-201ENST00000371447 OR2B8PP59922 312 aa9.87□□□□□ -0.83
PDE6C-201ENST00000371447 RPL23AP62750 156 aaKnown RBP9.87□□□□□ -0.83
PDE6C-201ENST00000371447 WFDC8Q8IUA0 241 aa9.87□□□□□ -0.83
PDE6C-201ENST00000371447 COQ2Q96H96 371 aa9.87□□□□□ -0.83
PDE6C-201ENST00000371447 POM121Q96HA1 1249 aa9.87□□□□□ -0.83
PDE6C-201ENST00000371447 CXXC4Q9H2H0 198 aa9.87□□□□□ -0.83
PDE6C-201ENST00000371447 KCNJ16Q9NPI9 418 aa9.87□□□□□ -0.83
PDE6C-201ENST00000371447 PARP11Q9NR21 331 aa9.87□□□□□ -0.83
PDE6C-201ENST00000371447 LYRM2Q9NU23 88 aaPredicted RBP9.87□□□□□ -0.83
PDE6C-201ENST00000371447 URGCP-MRPS24S4R325 110 aa9.87□□□□□ -0.83
PDE6C-201ENST00000371447 MAP1AP78559 2803 aaPredicted RBP9.86□□□□□ -0.83
PDE6C-201ENST00000371447 KMT2EQ8IZD2 1858 aa9.86□□□□□ -0.83
PDE6C-201ENST00000371447 C17orf98A8MV24 154 aa9.86□□□□□ -0.83
PDE6C-201ENST00000371447 S1PR2O95136 353 aa9.86□□□□□ -0.83
PDE6C-201ENST00000371447 IGLV2-14P01704 120 aa9.86□□□□□ -0.83
PDE6C-201ENST00000371447 FABP1P07148 127 aa9.86□□□□□ -0.83
PDE6C-201ENST00000371447 H2AFB1P0C5Y9 115 aa9.86□□□□□ -0.83
PDE6C-201ENST00000371447 CD82P27701 267 aa9.86□□□□□ -0.83
PDE6C-201ENST00000371447 ARL16Q0P5N6 197 aa9.86□□□□□ -0.83
PDE6C-201ENST00000371447 ZNF266Q14584 549 aa9.86□□□□□ -0.83
PDE6C-201ENST00000371447 ACP7Q6ZNF0 438 aa9.86□□□□□ -0.83
PDE6C-201ENST00000371447 OR5D13Q8NGL4 314 aa9.86□□□□□ -0.83
PDE6C-201ENST00000371447 ZDHHC16Q969W1 377 aa9.86□□□□□ -0.83
PDE6C-201ENST00000371447 VSIRQ9H7M9 311 aa9.86□□□□□ -0.83
PDE6C-201ENST00000371447 ZFP57Q9NU63 452 aa9.86□□□□□ -0.83
PDE6C-201ENST00000371447 ASH1LQ9NR48 2969 aaKnown RBP9.86□□□□□ -0.83
PDE6C-201ENST00000371447 UBE2L5PA0A1B0GUS4 154 aa9.86□□□□□ -0.83
PDE6C-201ENST00000371447 IFNA5P01569 189 aa9.86□□□□□ -0.83
PDE6C-201ENST00000371447 IGKV3-15P01624 115 aa9.86□□□□□ -0.83
PDE6C-201ENST00000371447 DVL1P1P54792 670 aaPredicted RBP9.86□□□□□ -0.83
PDE6C-201ENST00000371447 ERVK11-1P61568 191 aa9.86□□□□□ -0.83
PDE6C-201ENST00000371447 CCL8P80075 99 aa9.86□□□□□ -0.83
PDE6C-201ENST00000371447 ZNF585BQ52M93 769 aa9.86□□□□□ -0.83
PDE6C-201ENST00000371447 Q8IYB0 196 aa9.86□□□□□ -0.83
PDE6C-201ENST00000371447 SCGB1C1Q8TD33 95 aa9.86□□□□□ -0.83
PDE6C-201ENST00000371447 HINT2Q9BX68 163 aa9.86□□□□□ -0.83
PDE6C-201ENST00000371447 GNG13Q9P2W3 67 aa9.86□□□□□ -0.83
PDE6C-201ENST00000371447 SYNGR2O43760 224 aa9.85□□□□□ -0.83
PDE6C-201ENST00000371447 HOXB1P14653 301 aaPredicted RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms