RNA–Protein interactions for RNA: ENST00000369208.7

SIM1-202, Transcript of SIM bHLH transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIM1, Length 8,430 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM1-202ENST00000369208 CT55Q8WUE5 264 aa8.86□□□□□ -0.99
SIM1-202ENST00000369208 ALKBH3Q96Q83 286 aaPredicted RBP8.86□□□□□ -0.99
SIM1-202ENST00000369208 G6PC2Q9NQR9 355 aa8.86□□□□□ -0.99
SIM1-202ENST00000369208 ESPL1Q14674 2120 aa8.86□□□□□ -0.99
SIM1-202ENST00000369208 TRAV9-2A0A087WT02 112 aa8.86□□□□□ -0.99
SIM1-202ENST00000369208 LINC01559Q495D7 138 aa8.86□□□□□ -0.99
SIM1-202ENST00000369208 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.86□□□□□ -0.99
SIM1-202ENST00000369208 WDR31Q8NA23 367 aa8.86□□□□□ -0.99
SIM1-202ENST00000369208 IGHV3-15A0A0B4J1V0 119 aa8.85□□□□□ -0.99
SIM1-202ENST00000369208 TMEM272A0A1B0GTI8 110 aa8.85□□□□□ -0.99
SIM1-202ENST00000369208 WIPI1Q5MNZ9 446 aaPredicted RBP8.85□□□□□ -0.99
SIM1-202ENST00000369208 SHISA4Q96DD7 197 aa8.85□□□□□ -0.99
SIM1-202ENST00000369208 TUBD1Q9UJT1 453 aa8.85□□□□□ -0.99
SIM1-202ENST00000369208 COLCA2A8K830 154 aa8.85□□□□□ -0.99
SIM1-202ENST00000369208 RAMP3O60896 148 aa8.85□□□□□ -0.99
SIM1-202ENST00000369208 ZNF121P58317 390 aaPredicted RBP8.85□□□□□ -0.99
SIM1-202ENST00000369208 ZXDAP98168 799 aa8.85□□□□□ -0.99
SIM1-202ENST00000369208 MGAT2Q10469 447 aa8.85□□□□□ -0.99
SIM1-202ENST00000369208 SDCBPO00560 298 aaPredicted RBP8.85□□□□□ -0.99
SIM1-202ENST00000369208 AMER3Q8N944 861 aa8.85□□□□□ -0.99
SIM1-202ENST00000369208 VN1R1Q9GZP7 353 aa8.85□□□□□ -0.99
SIM1-202ENST00000369208 YAE1D1Q9NRH1 226 aa8.85□□□□□ -0.99
SIM1-202ENST00000369208 A0A087WUJ7 227 aa8.85□□□□□ -0.99
SIM1-202ENST00000369208 CST7O76096 145 aa8.85□□□□□ -0.99
SIM1-202ENST00000369208 LILRA3Q8N6C8 439 aaPredicted RBP8.85□□□□□ -0.99
SIM1-202ENST00000369208 PLPPR1Q8TBJ4 325 aa8.85□□□□□ -0.99
SIM1-202ENST00000369208 RBP4P02753 201 aa8.85□□□□□ -0.99
SIM1-202ENST00000369208 IL9P15248 144 aa8.85□□□□□ -0.99
SIM1-202ENST00000369208 GPR183P32249 361 aa8.85□□□□□ -0.99
SIM1-202ENST00000369208 MFAP4P55083 255 aa8.85□□□□□ -0.99
SIM1-202ENST00000369208 SRSF6Q13247 344 aaKnown RBP8.85□□□□□ -0.99
SIM1-202ENST00000369208 ALKBH6Q3KRA9 238 aa8.85□□□□□ -0.99
SIM1-202ENST00000369208 FHL5Q5TD97 284 aa8.85□□□□□ -0.99
SIM1-202ENST00000369208 ZNF788Q6ZQV5 615 aa8.85□□□□□ -0.99
SIM1-202ENST00000369208 DOLPP1Q86YN1 238 aa8.85□□□□□ -0.99
SIM1-202ENST00000369208 TMEM116Q8NCL8 245 aa8.85□□□□□ -0.99
SIM1-202ENST00000369208 PTPRFP10586 1907 aa8.85□□□□□ -0.99
SIM1-202ENST00000369208 GFRA3O60609 400 aa8.84□□□□□ -0.99
SIM1-202ENST00000369208 RHBDD2Q6NTF9 364 aa8.84□□□□□ -0.99
SIM1-202ENST00000369208 SLC25A40Q8TBP6 338 aa8.84□□□□□ -0.99
SIM1-202ENST00000369208 ARHGEF17Q96PE2 2063 aaPredicted RBP8.84□□□□□ -0.99
SIM1-202ENST00000369208 A0A1B0GW64 132 aa8.84□□□□□ -0.99
SIM1-202ENST00000369208 IFNL4K9M1U5 179 aa8.84□□□□□ -0.99
SIM1-202ENST00000369208 KCNMB1Q16558 191 aa8.84□□□□□ -0.99
SIM1-202ENST00000369208 OR10J3Q5JRS4 329 aa8.84□□□□□ -0.99
SIM1-202ENST00000369208 CLDN23Q96B33 292 aa8.84□□□□□ -0.99
SIM1-202ENST00000369208 CGGBP1Q9UFW8 167 aaPredicted RBP8.84□□□□□ -0.99
SIM1-202ENST00000369208 LANCL1O43813 399 aa8.84□□□□□ -0.99
SIM1-202ENST00000369208 FUT3P21217 361 aa8.84□□□□□ -0.99
SIM1-202ENST00000369208 CLDN18P56856 261 aa8.84□□□□□ -0.99
SIM1-202ENST00000369208 CACNA1DQ01668 2161 aa8.84□□□□□ -0.99
SIM1-202ENST00000369208 MPDU1O75352 247 aa8.84□□□□□ -0.99
SIM1-202ENST00000369208 LPAR6P43657 344 aa8.84□□□□□ -0.99
SIM1-202ENST00000369208 SOX8P57073 446 aa8.84□□□□□ -0.99
SIM1-202ENST00000369208 UBE2L3P68036 154 aaKnown RBP8.84□□□□□ -0.99
SIM1-202ENST00000369208 GTF3C1Q12789 2109 aa8.84□□□□□ -0.99
SIM1-202ENST00000369208 TRBV5-4A0A0C4DH59 114 aa8.84□□□□□ -0.99
SIM1-202ENST00000369208 A0A1B0GU03 582 aa8.84□□□□□ -0.99
SIM1-202ENST00000369208 RPL34P49207 117 aaKnown RBP8.84□□□□□ -0.99
SIM1-202ENST00000369208 GAGE13Q4V321 117 aa8.84□□□□□ -0.99
SIM1-202ENST00000369208 GBGT1Q8N5D6 347 aa8.84□□□□□ -0.99
SIM1-202ENST00000369208 NUP37Q8NFH4 326 aa8.84□□□□□ -0.99
SIM1-202ENST00000369208 OR1L4Q8NGR5 311 aa8.84□□□□□ -0.99
SIM1-202ENST00000369208 HARBI1Q96MB7 349 aa8.84□□□□□ -0.99
SIM1-202ENST00000369208 CRISPLD2Q9H0B8 497 aa8.84□□□□□ -0.99
SIM1-202ENST00000369208 KCNE1BA0A087WTH5 132 aa8.84□□□□□ -0.99
SIM1-202ENST00000369208 ONECUT2O95948 504 aa8.84□□□□□ -0.99
SIM1-202ENST00000369208 IGLV3-25P01717 112 aa8.84□□□□□ -0.99
SIM1-202ENST00000369208 STPG1Q5TH74 334 aa8.84□□□□□ -0.99
SIM1-202ENST00000369208 LIAT1Q6ZQX7 453 aa8.84□□□□□ -0.99
SIM1-202ENST00000369208 NR2C2APQ86WQ0 139 aa8.84□□□□□ -0.99
SIM1-202ENST00000369208 OR10D3Q8NH80 312 aa8.84□□□□□ -0.99
SIM1-202ENST00000369208 WDYHV1Q96HA8 205 aa8.84□□□□□ -0.99
SIM1-202ENST00000369208 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.84□□□□□ -0.99
SIM1-202ENST00000369208 IL36GQ9NZH8 169 aa8.84□□□□□ -0.99
SIM1-202ENST00000369208 SMCHD1A6NHR9 2005 aa8.84□□□□□ -0.99
SIM1-202ENST00000369208 C16orf97H3BN30 126 aa8.83□□□□□ -1
SIM1-202ENST00000369208 DLX1P56177 255 aa8.83□□□□□ -1
SIM1-202ENST00000369208 OR9G4Q8NGQ1 327 aa8.83□□□□□ -1
SIM1-202ENST00000369208 OR1N2Q8NGR9 330 aa8.83□□□□□ -1
SIM1-202ENST00000369208 YBX2Q9Y2T7 364 aaKnown RBP8.83□□□□□ -1
SIM1-202ENST00000369208 TMEM189A5PLL7 270 aa8.83□□□□□ -1
SIM1-202ENST00000369208 ZNF205O95201 554 aa8.83□□□□□ -1
SIM1-202ENST00000369208 ID1P41134 155 aa8.83□□□□□ -1
SIM1-202ENST00000369208 ATRAIDQ6UW56 229 aa8.83□□□□□ -1
SIM1-202ENST00000369208 MED29Q9NX70 200 aa8.83□□□□□ -1
SIM1-202ENST00000369208 MPC1Q9Y5U8 109 aa8.83□□□□□ -1
SIM1-202ENST00000369208 ACSM6Q6P461 480 aa8.83□□□□□ -1
SIM1-202ENST00000369208 SF3B5Q9BWJ5 86 aaKnown RBP8.83□□□□□ -1
SIM1-202ENST00000369208 GTSF1LQ9H1H1 148 aa8.83□□□□□ -1
SIM1-202ENST00000369208 WDR54Q9H977 334 aa8.83□□□□□ -1
SIM1-202ENST00000369208 C3orf80F5H4A9 247 aa8.83□□□□□ -1
SIM1-202ENST00000369208 VDAC1P21796 283 aa8.83□□□□□ -1
SIM1-202ENST00000369208 HSD52Q0P140 79 aa8.83□□□□□ -1
SIM1-202ENST00000369208 RGP1Q92546 391 aaPredicted RBP8.83□□□□□ -1
SIM1-202ENST00000369208 C20orf144Q9BQM9 153 aa8.83□□□□□ -1
SIM1-202ENST00000369208 DSPPQ9NZW4 1301 aa8.83□□□□□ -1
SIM1-202ENST00000369208 RBM11P57052 281 aaKnown RBP8.83□□□□□ -1
SIM1-202ENST00000369208 GAGE5Q13069 117 aa8.83□□□□□ -1
SIM1-202ENST00000369208 GAGE6Q13070 117 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms