RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 ABHD14BQ96IU4 210 aa19.61■□□□□ 0.73
SNX3-203ENST00000368979 ABHD14AQ9BUJ0 271 aa19.61■□□□□ 0.73
SNX3-203ENST00000368979 CHIAQ9BZP6 476 aa19.61■□□□□ 0.73
SNX3-203ENST00000368979 TMEM222Q9H0R3 208 aa19.61■□□□□ 0.73
SNX3-203ENST00000368979 IGHV3-7P01780 117 aa19.61■□□□□ 0.73
SNX3-203ENST00000368979 IGHV2-5P01817 119 aa19.61■□□□□ 0.73
SNX3-203ENST00000368979 SSTR2P30874 369 aa19.61■□□□□ 0.73
SNX3-203ENST00000368979 RAB7AP51149 207 aa19.61■□□□□ 0.73
SNX3-203ENST00000368979 C11orf91Q3C1V1 193 aa19.61■□□□□ 0.73
SNX3-203ENST00000368979 Q3ZCU0 254 aa19.61■□□□□ 0.73
SNX3-203ENST00000368979 CT45A1Q5HYN5 189 aa19.61■□□□□ 0.73
SNX3-203ENST00000368979 CT45A3Q8NHU0 189 aa19.61■□□□□ 0.73
SNX3-203ENST00000368979 ASB13Q8WXK3 278 aa19.61■□□□□ 0.73
SNX3-203ENST00000368979 SDHAF2Q9NX18 166 aa19.61■□□□□ 0.73
SNX3-203ENST00000368979 C22orf46C9J442 243 aa19.6■□□□□ 0.73
SNX3-203ENST00000368979 B3GALNT1O75752 331 aa19.6■□□□□ 0.73
SNX3-203ENST00000368979 UCP1P25874 307 aa19.6■□□□□ 0.73
SNX3-203ENST00000368979 SRSF4Q08170 494 aaKnown RBP19.6■□□□□ 0.73
SNX3-203ENST00000368979 ZFP69Q49AA0 526 aa19.6■□□□□ 0.73
SNX3-203ENST00000368979 ESCO2Q56NI9 601 aa19.6■□□□□ 0.73
SNX3-203ENST00000368979 RAB39BQ96DA2 213 aa19.6■□□□□ 0.73
SNX3-203ENST00000368979 WDR89Q96FK6 387 aaPredicted RBP19.6■□□□□ 0.73
SNX3-203ENST00000368979 UTP20O75691 2785 aaKnown RBP19.59■□□□□ 0.73
SNX3-203ENST00000368979 PPIAL4CA0A0B4J2A2 164 aa19.59■□□□□ 0.73
SNX3-203ENST00000368979 A0A1W2PPH5 198 aa19.59■□□□□ 0.73
SNX3-203ENST00000368979 SMLR1H3BR10 107 aa19.59■□□□□ 0.73
SNX3-203ENST00000368979 NDUFS8O00217 210 aa19.59■□□□□ 0.73
SNX3-203ENST00000368979 ADAP1O75689 374 aa19.59■□□□□ 0.73
SNX3-203ENST00000368979 C1QBP02746 253 aa19.59■□□□□ 0.73
SNX3-203ENST00000368979 PPIAL4GP0DN37 164 aa19.59■□□□□ 0.73
SNX3-203ENST00000368979 RAP2BP61225 183 aa19.59■□□□□ 0.73
SNX3-203ENST00000368979 SRPXP78539 464 aa19.59■□□□□ 0.73
SNX3-203ENST00000368979 LGI3Q8N145 548 aa19.59■□□□□ 0.73
SNX3-203ENST00000368979 OR51H1Q8NH63 302 aa19.59■□□□□ 0.73
SNX3-203ENST00000368979 LHFPL5Q8TAF8 219 aa19.59■□□□□ 0.73
SNX3-203ENST00000368979 C10orf105Q8TEF2 133 aa19.59■□□□□ 0.73
SNX3-203ENST00000368979 TMEM56Q96MV1 263 aa19.59■□□□□ 0.73
SNX3-203ENST00000368979 GSX2Q9BZM3 304 aa19.59■□□□□ 0.73
SNX3-203ENST00000368979 GAB2Q9UQC2 676 aa19.59■□□□□ 0.73
SNX3-203ENST00000368979 TMEM56-RWDD3S4R434 201 aa19.59■□□□□ 0.73
SNX3-203ENST00000368979 A0A087X0M5 115 aa19.58■□□□□ 0.73
SNX3-203ENST00000368979 A0A1B0GX30 115 aa19.58■□□□□ 0.73
SNX3-203ENST00000368979 RBP4P02753 201 aa19.58■□□□□ 0.73
SNX3-203ENST00000368979 IGHV1-8P0DP01 117 aa19.58■□□□□ 0.73
SNX3-203ENST00000368979 GPR12P47775 334 aa19.58■□□□□ 0.73
SNX3-203ENST00000368979 EIF2B2P49770 351 aaKnown RBP19.58■□□□□ 0.73
SNX3-203ENST00000368979 SLC25A48Q6ZT89 311 aaKnown RBP19.58■□□□□ 0.73
SNX3-203ENST00000368979 FAM168AQ92567 244 aa19.58■□□□□ 0.73
SNX3-203ENST00000368979 C18orf12Q96KH6 178 aa19.58■□□□□ 0.73
SNX3-203ENST00000368979 A0A1W2PPE3 182 aa19.57■□□□□ 0.72
SNX3-203ENST00000368979 RNF212BA8MTL3 300 aa19.57■□□□□ 0.72
SNX3-203ENST00000368979 KIAA1324LA8MWY0 1029 aaPredicted RBP19.57■□□□□ 0.72
SNX3-203ENST00000368979 G3V3Q6 166 aa19.57■□□□□ 0.72
SNX3-203ENST00000368979 GNG10P50151 68 aa19.57■□□□□ 0.72
SNX3-203ENST00000368979 KRTAP10-9P60411 292 aa19.57■□□□□ 0.72
SNX3-203ENST00000368979 CLDND2Q8NHS1 167 aa19.57■□□□□ 0.72
SNX3-203ENST00000368979 PIMREGQ9BSJ6 248 aa19.57■□□□□ 0.72
SNX3-203ENST00000368979 LIN7CQ9NUP9 197 aaKnown RBP19.57■□□□□ 0.72
SNX3-203ENST00000368979 VWC2LB2RUY7 222 aa19.56■□□□□ 0.72
SNX3-203ENST00000368979 PROP1O75360 226 aa19.56■□□□□ 0.72
SNX3-203ENST00000368979 CDS2O95674 445 aa19.56■□□□□ 0.72
SNX3-203ENST00000368979 LIPFP07098 398 aa19.56■□□□□ 0.72
SNX3-203ENST00000368979 LMO4P61968 165 aa19.56■□□□□ 0.72
SNX3-203ENST00000368979 CLEC2AQ6UVW9 174 aa19.56■□□□□ 0.72
SNX3-203ENST00000368979 GSG1LQ6UXU4 331 aa19.56■□□□□ 0.72
SNX3-203ENST00000368979 ZNF66Q6ZN08 573 aa19.56■□□□□ 0.72
SNX3-203ENST00000368979 ODF3L1Q8IXM7 274 aa19.56■□□□□ 0.72
SNX3-203ENST00000368979 C8orf31Q8N9H6 132 aa19.56■□□□□ 0.72
SNX3-203ENST00000368979 ZNF436-AS1Q8NC38 126 aaPredicted RBP19.56■□□□□ 0.72
SNX3-203ENST00000368979 OR2T35Q8NGX2 323 aa19.56■□□□□ 0.72
SNX3-203ENST00000368979 PERPQ96FX8 193 aa19.56■□□□□ 0.72
SNX3-203ENST00000368979 SESN1Q9Y6P5 492 aa19.56■□□□□ 0.72
SNX3-203ENST00000368979 LOC105371242A0A075B767 164 aa19.56■□□□□ 0.72
SNX3-203ENST00000368979 A8MXK9 166 aa19.56■□□□□ 0.72
SNX3-203ENST00000368979 HOXB5P09067 269 aa19.56■□□□□ 0.72
SNX3-203ENST00000368979 RPL30P62888 115 aaKnown RBP19.56■□□□□ 0.72
SNX3-203ENST00000368979 BTNL3Q6UXE8 466 aa19.56■□□□□ 0.72
SNX3-203ENST00000368979 MARVELD3Q96A59 401 aa19.56■□□□□ 0.72
SNX3-203ENST00000368979 METTL8Q9H825 291 aaKnown RBP19.56■□□□□ 0.72
SNX3-203ENST00000368979 MPTX1A8MV57 137 aa19.55■□□□□ 0.72
SNX3-203ENST00000368979 FAM25EA8MYX2 175 aa19.55■□□□□ 0.72
SNX3-203ENST00000368979 CATR1Q13166 79 aa19.55■□□□□ 0.72
SNX3-203ENST00000368979 TMEM268Q5VZI3 342 aa19.55■□□□□ 0.72
SNX3-203ENST00000368979 NOXA1Q86UR1 476 aa19.55■□□□□ 0.72
SNX3-203ENST00000368979 SELENOHQ8IZQ5 122 aaKnown RBP19.55■□□□□ 0.72
SNX3-203ENST00000368979 ZNF596Q8TC21 504 aa19.55■□□□□ 0.72
SNX3-203ENST00000368979 IL22RA2Q969J5 263 aa19.55■□□□□ 0.72
SNX3-203ENST00000368979 HSD17B10Q99714 261 aaKnown RBP19.55■□□□□ 0.72
SNX3-203ENST00000368979 PDCD10Q9BUL8 212 aa19.55■□□□□ 0.72
SNX3-203ENST00000368979 SAA2-SAA4A0A096LPE2 208 aa19.54■□□□□ 0.72
SNX3-203ENST00000368979 C5orf51A6NDU8 294 aa19.54■□□□□ 0.72
SNX3-203ENST00000368979 RAB29O14966 203 aa19.54■□□□□ 0.72
SNX3-203ENST00000368979 SAA2P0DJI9 122 aaPredicted RBP19.54■□□□□ 0.72
SNX3-203ENST00000368979 GZMKP49863 264 aa19.54■□□□□ 0.72
SNX3-203ENST00000368979 RPL39P5Q59GN2 51 aa19.54■□□□□ 0.72
SNX3-203ENST00000368979 Q5BKY6 102 aa19.54■□□□□ 0.72
SNX3-203ENST00000368979 GGNBP1Q5YKI7 109 aa19.54■□□□□ 0.72
SNX3-203ENST00000368979 C1orf229Q6ZS94 237 aaPredicted RBP19.54■□□□□ 0.72
SNX3-203ENST00000368979 LYZL2Q7Z4W2 148 aa19.54■□□□□ 0.72
SNX3-203ENST00000368979 LINC00311Q8N616 119 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms