RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 TRAPPC2LQ9UL33 140 aa7.26□□□□□ -1.25
SNX27-201ENST00000368838 C14orf166Q9Y224 244 aaKnown RBP7.26□□□□□ -1.25
SNX27-201ENST00000368838 KCNIP3Q9Y2W7 256 aa7.26□□□□□ -1.25
SNX27-201ENST00000368838 DOCK11Q5JSL3 2073 aa7.25□□□□□ -1.25
SNX27-201ENST00000368838 CRYM-AS1A6NIL9 109 aa7.25□□□□□ -1.25
SNX27-201ENST00000368838 ZNF729A6NN14 1252 aaPredicted RBP7.25□□□□□ -1.25
SNX27-201ENST00000368838 SDCBPO00560 298 aaPredicted RBP7.25□□□□□ -1.25
SNX27-201ENST00000368838 C1QBP02746 253 aa7.25□□□□□ -1.25
SNX27-201ENST00000368838 RLN1P04808 185 aa7.25□□□□□ -1.25
SNX27-201ENST00000368838 RCC1P18754 421 aaPredicted RBP7.25□□□□□ -1.25
SNX27-201ENST00000368838 COL8A2P25067 703 aa7.25□□□□□ -1.25
SNX27-201ENST00000368838 GNRHRP30968 328 aa7.25□□□□□ -1.25
SNX27-201ENST00000368838 SUPT4H1P63272 117 aaKnown RBP7.25□□□□□ -1.25
SNX27-201ENST00000368838 CYCSP99999 105 aaKnown RBP7.25□□□□□ -1.25
SNX27-201ENST00000368838 PDCD1Q15116 288 aa7.25□□□□□ -1.25
SNX27-201ENST00000368838 FCN2Q15485 313 aa7.25□□□□□ -1.25
SNX27-201ENST00000368838 ESCO2Q56NI9 601 aa7.25□□□□□ -1.25
SNX27-201ENST00000368838 KRBOX4Q5JUW0 171 aa7.25□□□□□ -1.25
SNX27-201ENST00000368838 SGPP2Q8IWX5 399 aa7.25□□□□□ -1.25
SNX27-201ENST00000368838 OR10J5Q8NHC4 309 aa7.25□□□□□ -1.25
SNX27-201ENST00000368838 HYLS1Q96M11 299 aa7.25□□□□□ -1.25
SNX27-201ENST00000368838 PHB2Q99623 299 aa7.25□□□□□ -1.25
SNX27-201ENST00000368838 FXYD6Q9H0Q3 95 aa7.25□□□□□ -1.25
SNX27-201ENST00000368838 RANBP3Q9H6Z4 567 aaPredicted RBP7.25□□□□□ -1.25
SNX27-201ENST00000368838 RAB18Q9NP72 206 aa7.25□□□□□ -1.25
SNX27-201ENST00000368838 OR14J1Q9UGF5 321 aa7.25□□□□□ -1.25
SNX27-201ENST00000368838 KIF25Q9UIL4 384 aa7.25□□□□□ -1.25
SNX27-201ENST00000368838 UBE2J1Q9Y385 318 aaPredicted RBP7.25□□□□□ -1.25
SNX27-201ENST00000368838 LINC00312Q9Y6C7 94 aa7.25□□□□□ -1.25
SNX27-201ENST00000368838 A0A087X0M5 115 aa7.24□□□□□ -1.25
SNX27-201ENST00000368838 KBTBD11-OT1A0A1B0GTJ5 212 aa7.24□□□□□ -1.25
SNX27-201ENST00000368838 A0A1B0GX30 115 aa7.24□□□□□ -1.25
SNX27-201ENST00000368838 NKX6-3A6NJ46 265 aa7.24□□□□□ -1.25
SNX27-201ENST00000368838 FAM157AC9JC47 383 aa7.24□□□□□ -1.25
SNX27-201ENST00000368838 C12orf77C9JDV5 145 aa7.24□□□□□ -1.25
SNX27-201ENST00000368838 GPR31O00270 319 aa7.24□□□□□ -1.25
SNX27-201ENST00000368838 SPINT2O43291 252 aa7.24□□□□□ -1.25
SNX27-201ENST00000368838 SSNA1O43805 119 aa7.24□□□□□ -1.25
SNX27-201ENST00000368838 HLA-AP01891 365 aaKnown RBP7.24□□□□□ -1.25
SNX27-201ENST00000368838 RBP4P02753 201 aa7.24□□□□□ -1.25
SNX27-201ENST00000368838 HNRNPCP07910 306 aaKnown RBP eCLIP7.24□□□□□ -1.25
SNX27-201ENST00000368838 S100GP29377 79 aa7.24□□□□□ -1.25
SNX27-201ENST00000368838 NPY4RP50391 375 aa7.24□□□□□ -1.25
SNX27-201ENST00000368838 HERV-K104P61576 105 aa7.24□□□□□ -1.25
SNX27-201ENST00000368838 PPP1R1AQ13522 171 aa7.24□□□□□ -1.25
SNX27-201ENST00000368838 IGSF11Q5DX21 431 aa7.24□□□□□ -1.25
SNX27-201ENST00000368838 SHISA2Q6UWI4 295 aa7.24□□□□□ -1.25
SNX27-201ENST00000368838 CMTM1Q8IZ96 169 aa7.24□□□□□ -1.25
SNX27-201ENST00000368838 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.24□□□□□ -1.25
SNX27-201ENST00000368838 LINC01356Q8N9X3 169 aa7.24□□□□□ -1.25
SNX27-201ENST00000368838 OR5M8Q8NGP6 311 aa7.24□□□□□ -1.25
SNX27-201ENST00000368838 COQ8AQ8NI60 647 aa7.24□□□□□ -1.25
SNX27-201ENST00000368838 C8orf46Q8TAG6 207 aa7.24□□□□□ -1.25
SNX27-201ENST00000368838 CYYR1Q96J86 154 aa7.24□□□□□ -1.25
SNX27-201ENST00000368838 ZNF436Q9C0F3 470 aaPredicted RBP7.24□□□□□ -1.25
SNX27-201ENST00000368838 SLC2A9Q9NRM0 540 aa7.24□□□□□ -1.25
SNX27-201ENST00000368838 PIPOXQ9P0Z9 390 aa7.24□□□□□ -1.25
SNX27-201ENST00000368838 MGAT4CQ9UBM8 478 aa7.24□□□□□ -1.25
SNX27-201ENST00000368838 CLN8Q9UBY8 286 aa7.24□□□□□ -1.25
SNX27-201ENST00000368838 hADV38S2A0JD32 116 aa7.23□□□□□ -1.25
SNX27-201ENST00000368838 FAM172BPA6NC97 362 aa7.23□□□□□ -1.25
SNX27-201ENST00000368838 TCF21O43680 179 aa7.23□□□□□ -1.25
SNX27-201ENST00000368838 CYB5R3P00387 301 aaPredicted RBP7.23□□□□□ -1.25
SNX27-201ENST00000368838 IGHV2-70P01814 119 aa7.23□□□□□ -1.25
SNX27-201ENST00000368838 HBZP02008 142 aa7.23□□□□□ -1.25
SNX27-201ENST00000368838 RPA2P15927 270 aa7.23□□□□□ -1.25
SNX27-201ENST00000368838 CXCL3P19876 107 aa7.23□□□□□ -1.25
SNX27-201ENST00000368838 AADACP22760 399 aa7.23□□□□□ -1.25
SNX27-201ENST00000368838 GABRA2P47869 451 aa7.23□□□□□ -1.25
SNX27-201ENST00000368838 GLIPR1P48060 266 aa7.23□□□□□ -1.25
SNX27-201ENST00000368838 LUMP51884 338 aaPredicted RBP7.23□□□□□ -1.25
SNX27-201ENST00000368838 LOXL3P58215 753 aa7.23□□□□□ -1.25
SNX27-201ENST00000368838 AESQ08117 197 aa7.23□□□□□ -1.25
SNX27-201ENST00000368838 FGL1Q08830 312 aa7.23□□□□□ -1.25
SNX27-201ENST00000368838 CBX3Q13185 183 aa7.23□□□□□ -1.25
SNX27-201ENST00000368838 IL15RAQ13261 267 aa7.23□□□□□ -1.25
SNX27-201ENST00000368838 ATXN7L3Q14CW9 347 aaPredicted RBP7.23□□□□□ -1.25
SNX27-201ENST00000368838 AVPI1Q5T686 147 aa7.23□□□□□ -1.25
SNX27-201ENST00000368838 LIN54Q6MZP7 749 aa7.23□□□□□ -1.25
SNX27-201ENST00000368838 CFAP161Q6P656 301 aa7.23□□□□□ -1.25
SNX27-201ENST00000368838 ASCC1Q8N9N2 400 aaKnown RBP7.23□□□□□ -1.25
SNX27-201ENST00000368838 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.23□□□□□ -1.25
SNX27-201ENST00000368838 CLDND2Q8NHS1 167 aa7.23□□□□□ -1.25
SNX27-201ENST00000368838 ZNF596Q8TC21 504 aa7.23□□□□□ -1.25
SNX27-201ENST00000368838 CAPSLQ8WWF8 208 aa7.23□□□□□ -1.25
SNX27-201ENST00000368838 RTN4IP1Q8WWV3 396 aaPredicted RBP7.23□□□□□ -1.25
SNX27-201ENST00000368838 MAFIPQ8WZ33 124 aa7.23□□□□□ -1.25
SNX27-201ENST00000368838 TMEM56Q96MV1 263 aa7.23□□□□□ -1.25
SNX27-201ENST00000368838 SEC22CQ9BRL7 303 aa7.23□□□□□ -1.25
SNX27-201ENST00000368838 AGMATQ9BSE5 352 aa7.23□□□□□ -1.25
SNX27-201ENST00000368838 NAA60Q9H7X0 242 aa7.23□□□□□ -1.25
SNX27-201ENST00000368838 TMEM56-RWDD3S4R434 201 aa7.23□□□□□ -1.25
SNX27-201ENST00000368838 TRGV10A0A0A0MS01 117 aa7.22□□□□□ -1.25
SNX27-201ENST00000368838 HMSDA8MTL9 139 aa7.22□□□□□ -1.25
SNX27-201ENST00000368838 F8W735 103 aaPredicted RBP7.22□□□□□ -1.25
SNX27-201ENST00000368838 H0Y980 276 aa7.22□□□□□ -1.25
SNX27-201ENST00000368838 MPPED1O15442 326 aa7.22□□□□□ -1.25
SNX27-201ENST00000368838 PPIHO43447 177 aaKnown RBP7.22□□□□□ -1.25
SNX27-201ENST00000368838 VENTXO95231 258 aa7.22□□□□□ -1.25
SNX27-201ENST00000368838 CDS2O95674 445 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 1076.6 ms