RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 GLIPR1P48060 266 aa11.1□□□□□ -0.63
PTPRK-207ENST00000368226 IZUMO4Q1ZYL8 232 aa11.1□□□□□ -0.63
PTPRK-207ENST00000368226 SLC35E3Q7Z769 313 aa11.1□□□□□ -0.63
PTPRK-207ENST00000368226 ABHD17AQ96GS6 310 aa11.1□□□□□ -0.63
PTPRK-207ENST00000368226 MRPL37Q9BZE1 423 aaKnown RBP11.1□□□□□ -0.63
PTPRK-207ENST00000368226 OR5AC2Q9NZP5 309 aa11.1□□□□□ -0.63
PTPRK-207ENST00000368226 OR10J1P30954 320 aa11.09□□□□□ -0.63
PTPRK-207ENST00000368226 OR2T8A6NH00 312 aa11.09□□□□□ -0.63
PTPRK-207ENST00000368226 DHRS7CA6NNS2 312 aa11.09□□□□□ -0.63
PTPRK-207ENST00000368226 MDKP21741 143 aaPredicted RBP11.09□□□□□ -0.63
PTPRK-207ENST00000368226 ATP6V0CP27449 155 aa11.09□□□□□ -0.63
PTPRK-207ENST00000368226 LGALSLQ3ZCW2 172 aaPredicted RBP11.09□□□□□ -0.63
PTPRK-207ENST00000368226 VWCEQ96DN2 955 aa11.09□□□□□ -0.63
PTPRK-207ENST00000368226 IGHV3-23P01764 117 aa11.09□□□□□ -0.63
PTPRK-207ENST00000368226 ID4P47928 161 aa11.09□□□□□ -0.63
PTPRK-207ENST00000368226 KLRB1Q12918 225 aa11.09□□□□□ -0.63
PTPRK-207ENST00000368226 CSRP2Q16527 193 aa11.09□□□□□ -0.63
PTPRK-207ENST00000368226 ZNF645Q8N7E2 425 aa11.09□□□□□ -0.63
PTPRK-207ENST00000368226 NFAM1Q8NET5 270 aaPredicted RBP11.09□□□□□ -0.63
PTPRK-207ENST00000368226 SNRNP40Q96DI7 357 aaKnown RBP11.09□□□□□ -0.63
PTPRK-207ENST00000368226 PAXXQ9BUH6 204 aa11.09□□□□□ -0.63
PTPRK-207ENST00000368226 ZFC3H1O60293 1989 aaKnown RBP11.09□□□□□ -0.63
PTPRK-207ENST00000368226 CDK2AP1O14519 115 aa11.09□□□□□ -0.63
PTPRK-207ENST00000368226 F12P00748 615 aaPredicted RBP11.09□□□□□ -0.63
PTPRK-207ENST00000368226 FAM206AQ9NX38 181 aa11.09□□□□□ -0.63
PTPRK-207ENST00000368226 DLL3Q9NYJ7 618 aa11.09□□□□□ -0.63
PTPRK-207ENST00000368226 ARID1AO14497 2285 aa11.09□□□□□ -0.63
PTPRK-207ENST00000368226 SNCGO76070 127 aa11.09□□□□□ -0.63
PTPRK-207ENST00000368226 C16orf92Q96LL3 132 aa11.09□□□□□ -0.63
PTPRK-207ENST00000368226 CALYQ9NYX4 217 aa11.09□□□□□ -0.63
PTPRK-207ENST00000368226 ZDHHC8Q9ULC8 765 aa11.09□□□□□ -0.63
PTPRK-207ENST00000368226 IGSF23A1L1A6 192 aa11.08□□□□□ -0.64
PTPRK-207ENST00000368226 RECKO95980 971 aa11.08□□□□□ -0.64
PTPRK-207ENST00000368226 HOXD4P09016 255 aaPredicted RBP11.08□□□□□ -0.64
PTPRK-207ENST00000368226 IER3P46695 156 aa11.08□□□□□ -0.64
PTPRK-207ENST00000368226 KLHDC1Q8N7A1 406 aa11.08□□□□□ -0.64
PTPRK-207ENST00000368226 FAM181AQ8N9Y4 354 aa11.08□□□□□ -0.64
PTPRK-207ENST00000368226 SCMH1Q96GD3 660 aa11.08□□□□□ -0.64
PTPRK-207ENST00000368226 IGKV3D-11A0A0A0MRZ8 115 aa11.08□□□□□ -0.64
PTPRK-207ENST00000368226 IGKV3-11P04433 115 aa11.08□□□□□ -0.64
PTPRK-207ENST00000368226 HOXA4Q00056 320 aaPredicted RBP11.08□□□□□ -0.64
PTPRK-207ENST00000368226 RBKSQ9H477 322 aa11.08□□□□□ -0.64
PTPRK-207ENST00000368226 IDI2-AS1Q9NZ38 188 aa11.08□□□□□ -0.64
PTPRK-207ENST00000368226 RAXQ9Y2V3 346 aa11.08□□□□□ -0.64
PTPRK-207ENST00000368226 S4R3C0 116 aa11.08□□□□□ -0.64
PTPRK-207ENST00000368226 IGHV1-69-2A0A0G2JMI3 117 aa11.08□□□□□ -0.64
PTPRK-207ENST00000368226 SIGLEC5O15389 551 aa11.08□□□□□ -0.64
PTPRK-207ENST00000368226 CA11O75493 328 aa11.08□□□□□ -0.64
PTPRK-207ENST00000368226 ID1P41134 155 aa11.08□□□□□ -0.64
PTPRK-207ENST00000368226 ABHD12Q8N2K0 398 aa11.08□□□□□ -0.64
PTPRK-207ENST00000368226 PNKDQ8N490 385 aa11.08□□□□□ -0.64
PTPRK-207ENST00000368226 C9orf62Q8N4C0 152 aa11.08□□□□□ -0.64
PTPRK-207ENST00000368226 TPRP12270 2363 aaKnown RBP11.08□□□□□ -0.64
PTPRK-207ENST00000368226 RBBP6Q7Z6E9 1792 aaKnown RBP11.08□□□□□ -0.64
PTPRK-207ENST00000368226 CXorf1O96002 111 aa11.08□□□□□ -0.64
PTPRK-207ENST00000368226 CD81P60033 236 aa11.08□□□□□ -0.64
PTPRK-207ENST00000368226 C11orf91Q3C1V1 193 aa11.08□□□□□ -0.64
PTPRK-207ENST00000368226 SPANXN1Q5VSR9 72 aa11.08□□□□□ -0.64
PTPRK-207ENST00000368226 ZBTB34Q8NCN2 500 aa11.08□□□□□ -0.64
PTPRK-207ENST00000368226 ZNRF1Q8ND25 227 aa11.08□□□□□ -0.64
PTPRK-207ENST00000368226 OR8A1Q8NGG7 326 aa11.08□□□□□ -0.64
PTPRK-207ENST00000368226 VAX2Q9UIW0 290 aa11.08□□□□□ -0.64
PTPRK-207ENST00000368226 LCN2P80188 198 aa11.08□□□□□ -0.64
PTPRK-207ENST00000368226 EGR4Q05215 589 aa11.08□□□□□ -0.64
PTPRK-207ENST00000368226 SHISA5Q8N114 240 aa11.08□□□□□ -0.64
PTPRK-207ENST00000368226 SNX22Q96L94 193 aa11.08□□□□□ -0.64
PTPRK-207ENST00000368226 FUT9Q9Y231 359 aa11.08□□□□□ -0.64
PTPRK-207ENST00000368226 PXMP4Q9Y6I8 212 aa11.08□□□□□ -0.64
PTPRK-207ENST00000368226 LOC105371242A0A075B767 164 aa11.07□□□□□ -0.64
PTPRK-207ENST00000368226 ZNF253O75346 499 aa11.07□□□□□ -0.64
PTPRK-207ENST00000368226 SSTR5P35346 364 aa11.07□□□□□ -0.64
PTPRK-207ENST00000368226 GBGT1Q8N5D6 347 aa11.07□□□□□ -0.64
PTPRK-207ENST00000368226 STXBP6Q8NFX7 210 aa11.07□□□□□ -0.64
PTPRK-207ENST00000368226 OR2T10Q8NGZ9 312 aa11.07□□□□□ -0.64
PTPRK-207ENST00000368226 OR4A5Q8NH83 315 aa11.07□□□□□ -0.64
PTPRK-207ENST00000368226 AP5S1Q9NUS5 200 aa11.07□□□□□ -0.64
PTPRK-207ENST00000368226 UBE2V2Q15819 145 aa11.07□□□□□ -0.64
PTPRK-207ENST00000368226 PEAR1Q5VY43 1037 aaPredicted RBP11.07□□□□□ -0.64
PTPRK-207ENST00000368226 ZNF738Q8NE65 137 aa11.07□□□□□ -0.64
PTPRK-207ENST00000368226 SCNM1Q9BWG6 230 aa11.07□□□□□ -0.64
PTPRK-207ENST00000368226 IGHV3OR16-13A0A075B7E8 117 aa11.07□□□□□ -0.64
PTPRK-207ENST00000368226 IGHV3-74A0A0B4J1X5 117 aa11.07□□□□□ -0.64
PTPRK-207ENST00000368226 ODAMA1E959 279 aa11.07□□□□□ -0.64
PTPRK-207ENST00000368226 TGFBR3LH3BV60 316 aa11.07□□□□□ -0.64
PTPRK-207ENST00000368226 HIST1H1EP10412 219 aaKnown RBP11.07□□□□□ -0.64
PTPRK-207ENST00000368226 TWIST1Q15672 202 aa11.07□□□□□ -0.64
PTPRK-207ENST00000368226 CXorf66Q5JRM2 361 aaPredicted RBP11.07□□□□□ -0.64
PTPRK-207ENST00000368226 PHYHIPLQ96FC7 376 aa11.07□□□□□ -0.64
PTPRK-207ENST00000368226 MRPS18AQ9NVS2 196 aaKnown RBP11.07□□□□□ -0.64
PTPRK-207ENST00000368226 HYPMO75409 117 aa11.07□□□□□ -0.64
PTPRK-207ENST00000368226 PTBP3O95758 552 aaKnown RBP11.07□□□□□ -0.64
PTPRK-207ENST00000368226 MELTFP08582 738 aa11.07□□□□□ -0.64
PTPRK-207ENST00000368226 RPL29P47914 159 aaKnown RBP11.07□□□□□ -0.64
PTPRK-207ENST00000368226 SGK494Q96LW2 274 aa11.07□□□□□ -0.64
PTPRK-207ENST00000368226 VPS25Q9BRG1 176 aa11.07□□□□□ -0.64
PTPRK-207ENST00000368226 XIRP1Q702N8 1843 aaKnown RBP11.07□□□□□ -0.64
PTPRK-207ENST00000368226 TM4SF20Q53R12 229 aa11.06□□□□□ -0.64
PTPRK-207ENST00000368226 OR4B1Q8NGF8 309 aa11.06□□□□□ -0.64
PTPRK-207ENST00000368226 PLXNA1Q9UIW2 1896 aa11.06□□□□□ -0.64
PTPRK-207ENST00000368226 CBY3A6NI87 242 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms