RNA–Protein interactions for RNA: ENST00000367251.7

SYNE1-205, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best)

Gene SYNE1, Length 5,837 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-205ENST00000367251 PSG4Q00888 419 aa7.82□□□□□ -1.16
SYNE1-205ENST00000367251 ADIPOQQ15848 244 aa7.82□□□□□ -1.16
SYNE1-205ENST00000367251 VWA1Q6PCB0 445 aa7.82□□□□□ -1.16
SYNE1-205ENST00000367251 CBLN2Q8IUK8 224 aa7.82□□□□□ -1.16
SYNE1-205ENST00000367251 DIRC2Q96SL1 478 aa7.82□□□□□ -1.16
SYNE1-205ENST00000367251 PRR13Q9NZ81 148 aa7.82□□□□□ -1.16
SYNE1-205ENST00000367251 SCGB1A1P11684 91 aa7.81□□□□□ -1.16
SYNE1-205ENST00000367251 CCL4P13236 92 aa7.81□□□□□ -1.16
SYNE1-205ENST00000367251 CLEC12BQ2HXU8 276 aa7.81□□□□□ -1.16
SYNE1-205ENST00000367251 FAM209AQ5JX71 171 aa7.81□□□□□ -1.16
SYNE1-205ENST00000367251 TOMM20LQ6UXN7 152 aa7.81□□□□□ -1.16
SYNE1-205ENST00000367251 TMEM54Q969K7 222 aa7.81□□□□□ -1.16
SYNE1-205ENST00000367251 AMELYQ99218 206 aa7.81□□□□□ -1.16
SYNE1-205ENST00000367251 CCL19Q99731 98 aa7.81□□□□□ -1.16
SYNE1-205ENST00000367251 TRPM6Q9BX84 2022 aa7.81□□□□□ -1.16
SYNE1-205ENST00000367251 ZMAT5Q9UDW3 170 aaKnown RBP7.81□□□□□ -1.16
SYNE1-205ENST00000367251 ERVH48-1M5A8F1 160 aa7.81□□□□□ -1.16
SYNE1-205ENST00000367251 CIDEAO60543 219 aa7.81□□□□□ -1.16
SYNE1-205ENST00000367251 HPRT1P00492 218 aa7.81□□□□□ -1.16
SYNE1-205ENST00000367251 HKR1P10072 659 aa7.81□□□□□ -1.16
SYNE1-205ENST00000367251 CRYBA2P53672 197 aa7.81□□□□□ -1.16
SYNE1-205ENST00000367251 LBHQ53QV2 105 aaPredicted RBP7.81□□□□□ -1.16
SYNE1-205ENST00000367251 DCAF10Q5QP82 559 aa7.81□□□□□ -1.16
SYNE1-205ENST00000367251 C1orf162Q8NEQ5 155 aaPredicted RBP7.81□□□□□ -1.16
SYNE1-205ENST00000367251 LOXL4Q96JB6 756 aa7.81□□□□□ -1.16
SYNE1-205ENST00000367251 FGF8P55075 233 aaPredicted RBP7.81□□□□□ -1.16
SYNE1-205ENST00000367251 SLC35E4Q6ICL7 350 aa7.81□□□□□ -1.16
SYNE1-205ENST00000367251 SLC23A3Q6PIS1 610 aa7.81□□□□□ -1.16
SYNE1-205ENST00000367251 MOGAT3Q86VF5 341 aa7.81□□□□□ -1.16
SYNE1-205ENST00000367251 OR4B1Q8NGF8 309 aa7.81□□□□□ -1.16
SYNE1-205ENST00000367251 LHFPL6Q9Y693 200 aa7.81□□□□□ -1.16
SYNE1-205ENST00000367251 NPIPB9F8W1W9 429 aa7.81□□□□□ -1.16
SYNE1-205ENST00000367251 BCL2P10415 239 aa7.81□□□□□ -1.16
SYNE1-205ENST00000367251 ACP1P24666 158 aa7.81□□□□□ -1.16
SYNE1-205ENST00000367251 TM4SF20Q53R12 229 aa7.81□□□□□ -1.16
SYNE1-205ENST00000367251 ABHD3Q8WU67 409 aa7.81□□□□□ -1.16
SYNE1-205ENST00000367251 TTTY12Q9BZ98 90 aa7.81□□□□□ -1.16
SYNE1-205ENST00000367251 NPIPB6E9PJ23 425 aa7.81□□□□□ -1.16
SYNE1-205ENST00000367251 CDIPTO14735 213 aa7.81□□□□□ -1.16
SYNE1-205ENST00000367251 PSG2P11465 335 aa7.81□□□□□ -1.16
SYNE1-205ENST00000367251 P2RY4P51582 365 aa7.81□□□□□ -1.16
SYNE1-205ENST00000367251 SUCLG1P53597 346 aaKnown RBP7.81□□□□□ -1.16
SYNE1-205ENST00000367251 FAM3BP58499 235 aaPredicted RBP7.81□□□□□ -1.16
SYNE1-205ENST00000367251 STARD6P59095 220 aa7.81□□□□□ -1.16
SYNE1-205ENST00000367251 LY6EQ16553 131 aa7.81□□□□□ -1.16
SYNE1-205ENST00000367251 TMEM30BQ3MIR4 351 aa7.81□□□□□ -1.16
SYNE1-205ENST00000367251 TUBD1Q9UJT1 453 aa7.81□□□□□ -1.16
SYNE1-205ENST00000367251 RTTNQ86VV8 2226 aa7.8□□□□□ -1.16
SYNE1-205ENST00000367251 ANKRD36A6QL64 1941 aa7.8□□□□□ -1.16
SYNE1-205ENST00000367251 CXorf65A6NEN9 183 aa7.8□□□□□ -1.16
SYNE1-205ENST00000367251 RHBDL1O75783 438 aa7.8□□□□□ -1.16
SYNE1-205ENST00000367251 HIST1H1EP10412 219 aaKnown RBP7.8□□□□□ -1.16
SYNE1-205ENST00000367251 PMS2P11Q13670 270 aa7.8□□□□□ -1.16
SYNE1-205ENST00000367251 VAMP3Q15836 100 aa7.8□□□□□ -1.16
SYNE1-205ENST00000367251 PDPNQ86YL7 162 aa7.8□□□□□ -1.16
SYNE1-205ENST00000367251 SLC25A40Q8TBP6 338 aa7.8□□□□□ -1.16
SYNE1-205ENST00000367251 DNASE2BQ8WZ79 361 aa7.8□□□□□ -1.16
SYNE1-205ENST00000367251 MARS2Q96GW9 593 aaKnown RBP7.8□□□□□ -1.16
SYNE1-205ENST00000367251 FTH1P19P0C7X4 201 aa7.8□□□□□ -1.16
SYNE1-205ENST00000367251 APELAP0DMC3 54 aa7.8□□□□□ -1.16
SYNE1-205ENST00000367251 IL11P20809 199 aa7.8□□□□□ -1.16
SYNE1-205ENST00000367251 C3AR1Q16581 482 aa7.8□□□□□ -1.16
SYNE1-205ENST00000367251 GCSAMQ8N6F7 178 aa7.8□□□□□ -1.16
SYNE1-205ENST00000367251 MRGPRFQ96AM1 343 aa7.8□□□□□ -1.16
SYNE1-205ENST00000367251 RSG1Q9BU20 258 aa7.8□□□□□ -1.16
SYNE1-205ENST00000367251 OR5AC2Q9NZP5 309 aa7.8□□□□□ -1.16
SYNE1-205ENST00000367251 RCC2Q9P258 522 aaKnown RBP7.8□□□□□ -1.16
SYNE1-205ENST00000367251 M0R3E3 92 aa7.8□□□□□ -1.16
SYNE1-205ENST00000367251 CYB5R3P00387 301 aaPredicted RBP7.8□□□□□ -1.16
SYNE1-205ENST00000367251 C1QTNF12Q5T7M4 302 aa7.8□□□□□ -1.16
SYNE1-205ENST00000367251 EIF4E3Q8N5X7 224 aaKnown RBP7.8□□□□□ -1.16
SYNE1-205ENST00000367251 Q96M66 194 aa7.8□□□□□ -1.16
SYNE1-205ENST00000367251 METTL26Q96S19 204 aa7.8□□□□□ -1.16
SYNE1-205ENST00000367251 CACNA1EQ15878 2313 aa7.8□□□□□ -1.16
SYNE1-205ENST00000367251 LCTP09848 1927 aa7.8□□□□□ -1.16
SYNE1-205ENST00000367251 SYNGR1O43759 233 aa7.8□□□□□ -1.16
SYNE1-205ENST00000367251 ZNF324O75467 553 aaPredicted RBP7.8□□□□□ -1.16
SYNE1-205ENST00000367251 IGLV3-19P01714 112 aa7.8□□□□□ -1.16
SYNE1-205ENST00000367251 THY1P04216 161 aa7.8□□□□□ -1.16
SYNE1-205ENST00000367251 MELTFP08582 738 aa7.8□□□□□ -1.16
SYNE1-205ENST00000367251 MUC1P15941 1255 aaPredicted RBP7.8□□□□□ -1.16
SYNE1-205ENST00000367251 HINT1P49773 126 aaPredicted RBP7.8□□□□□ -1.16
SYNE1-205ENST00000367251 TEPPQ6URK8 271 aa7.8□□□□□ -1.16
SYNE1-205ENST00000367251 OR8G5Q8NG78 346 aa7.8□□□□□ -1.16
SYNE1-205ENST00000367251 RAB24Q969Q5 203 aa7.8□□□□□ -1.16
SYNE1-205ENST00000367251 STARD4Q96DR4 205 aa7.8□□□□□ -1.16
SYNE1-205ENST00000367251 PERPQ96FX8 193 aa7.8□□□□□ -1.16
SYNE1-205ENST00000367251 PDCD11Q14690 1871 aaKnown RBP7.79□□□□□ -1.16
SYNE1-205ENST00000367251 A0A0G2JK05 382 aa7.79□□□□□ -1.16
SYNE1-205ENST00000367251 UBE2L3P68036 154 aaKnown RBP7.79□□□□□ -1.16
SYNE1-205ENST00000367251 ANKRD55Q3KP44 614 aa7.79□□□□□ -1.16
SYNE1-205ENST00000367251 MDP1Q86V88 176 aa7.79□□□□□ -1.16
SYNE1-205ENST00000367251 TMEM252Q8N6L7 170 aa7.79□□□□□ -1.16
SYNE1-205ENST00000367251 ZNF645Q8N7E2 425 aa7.79□□□□□ -1.16
SYNE1-205ENST00000367251 DUX5Q96PT3 197 aa7.79□□□□□ -1.16
SYNE1-205ENST00000367251 INTS1Q8N201 2190 aaKnown RBP7.79□□□□□ -1.16
SYNE1-205ENST00000367251 ARG1P05089 322 aa7.79□□□□□ -1.16
SYNE1-205ENST00000367251 PMCHP20382 165 aa7.79□□□□□ -1.16
SYNE1-205ENST00000367251 GCSHP23434 173 aa7.79□□□□□ -1.16
SYNE1-205ENST00000367251 RPS11P62280 158 aaKnown RBP eCLIP7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms