RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 MIDNQ504T8 468 aa9.94□□□□□ -0.82
SYNE1-204ENST00000367248 CLLU1Q5K131 121 aa9.94□□□□□ -0.82
SYNE1-204ENST00000367248 DLL3Q9NYJ7 618 aa9.94□□□□□ -0.82
SYNE1-204ENST00000367248 MIOXQ9UGB7 285 aa9.94□□□□□ -0.82
SYNE1-204ENST00000367248 DUXBA0A1W2PPF3 345 aa9.94□□□□□ -0.82
SYNE1-204ENST00000367248 ZNF137PP52743 207 aa9.94□□□□□ -0.82
SYNE1-204ENST00000367248 FAM209AQ5JX71 171 aa9.94□□□□□ -0.82
SYNE1-204ENST00000367248 POM121Q96HA1 1249 aa9.94□□□□□ -0.82
SYNE1-204ENST00000367248 SH2D2AQ9NP31 389 aa9.94□□□□□ -0.82
SYNE1-204ENST00000367248 OPN4Q9UHM6 478 aa9.94□□□□□ -0.82
SYNE1-204ENST00000367248 A0A1B0GU03 582 aa9.94□□□□□ -0.82
SYNE1-204ENST00000367248 S100A8P05109 93 aa9.94□□□□□ -0.82
SYNE1-204ENST00000367248 CD40P25942 277 aa9.94□□□□□ -0.82
SYNE1-204ENST00000367248 SLC25A38Q96DW6 304 aa9.94□□□□□ -0.82
SYNE1-204ENST00000367248 FAM103A1Q9BTL3 118 aaKnown RBP9.94□□□□□ -0.82
SYNE1-204ENST00000367248 CTDSP1Q9GZU7 261 aa9.94□□□□□ -0.82
SYNE1-204ENST00000367248 MRPS18CQ9Y3D5 142 aaKnown RBP9.94□□□□□ -0.82
SYNE1-204ENST00000367248 ADAM11O75078 769 aa9.94□□□□□ -0.82
SYNE1-204ENST00000367248 FOXH1O75593 365 aa9.94□□□□□ -0.82
SYNE1-204ENST00000367248 OR2C1O95371 312 aa9.94□□□□□ -0.82
SYNE1-204ENST00000367248 HPRT1P00492 218 aa9.94□□□□□ -0.82
SYNE1-204ENST00000367248 SULT1A1P50225 295 aa9.94□□□□□ -0.82
SYNE1-204ENST00000367248 MOGAT2Q3SYC2 334 aa9.94□□□□□ -0.82
SYNE1-204ENST00000367248 NRN1LQ496H8 165 aa9.94□□□□□ -0.82
SYNE1-204ENST00000367248 LINC00114Q6XXX2 140 aa9.94□□□□□ -0.82
SYNE1-204ENST00000367248 SAXO1Q8IYX7 474 aa9.94□□□□□ -0.82
SYNE1-204ENST00000367248 MIA3Q5JRA6 1907 aa9.93□□□□□ -0.82
SYNE1-204ENST00000367248 ZNF418Q8TF45 676 aaPredicted RBP9.93□□□□□ -0.82
SYNE1-204ENST00000367248 RNF2Q99496 336 aa9.93□□□□□ -0.82
SYNE1-204ENST00000367248 CECR9P0C854 216 aa9.93□□□□□ -0.82
SYNE1-204ENST00000367248 IGSF11Q5DX21 431 aa9.93□□□□□ -0.82
SYNE1-204ENST00000367248 LAIR2Q6ISS4 152 aa9.93□□□□□ -0.82
SYNE1-204ENST00000367248 UNQ9370/PRO34162Q6UXP9 181 aa9.93□□□□□ -0.82
SYNE1-204ENST00000367248 BVESQ8NE79 360 aa9.93□□□□□ -0.82
SYNE1-204ENST00000367248 DEPPQ9NTK1 212 aa9.93□□□□□ -0.82
SYNE1-204ENST00000367248 A0A1W2PPQ1 181 aa9.93□□□□□ -0.82
SYNE1-204ENST00000367248 TRIM77I1YAP6 450 aa9.93□□□□□ -0.82
SYNE1-204ENST00000367248 PAX5Q02548 391 aa9.93□□□□□ -0.82
SYNE1-204ENST00000367248 UBE2V2Q15819 145 aa9.93□□□□□ -0.82
SYNE1-204ENST00000367248 C1orf162Q8NEQ5 155 aaPredicted RBP9.93□□□□□ -0.82
SYNE1-204ENST00000367248 FAM131CQ96AQ9 280 aa9.93□□□□□ -0.82
SYNE1-204ENST00000367248 CALYQ9NYX4 217 aa9.93□□□□□ -0.82
SYNE1-204ENST00000367248 HLA-GP17693 338 aa9.93□□□□□ -0.82
SYNE1-204ENST00000367248 HTR1DP28221 377 aa9.93□□□□□ -0.82
SYNE1-204ENST00000367248 MC5RP33032 325 aa9.93□□□□□ -0.82
SYNE1-204ENST00000367248 CLDN18P56856 261 aa9.93□□□□□ -0.82
SYNE1-204ENST00000367248 ERVFC1-1P60608 527 aa9.93□□□□□ -0.82
SYNE1-204ENST00000367248 UBE2L3P68036 154 aaKnown RBP9.93□□□□□ -0.82
SYNE1-204ENST00000367248 RHOVQ96L33 236 aa9.93□□□□□ -0.82
SYNE1-204ENST00000367248 ANKRD55Q3KP44 614 aa9.92□□□□□ -0.82
SYNE1-204ENST00000367248 ABHD12Q8N2K0 398 aa9.92□□□□□ -0.82
SYNE1-204ENST00000367248 OR4B1Q8NGF8 309 aa9.92□□□□□ -0.82
SYNE1-204ENST00000367248 NXF2Q9GZY0 626 aaKnown RBP9.92□□□□□ -0.82
SYNE1-204ENST00000367248 GHITMQ9H3K2 345 aa9.92□□□□□ -0.82
SYNE1-204ENST00000367248 IGKV1D-43A0A0B4J1Z2 117 aa9.92□□□□□ -0.82
SYNE1-204ENST00000367248 TGOLN2O43493 480 aa9.92□□□□□ -0.82
SYNE1-204ENST00000367248 IGKV3-20P01619 116 aa9.92□□□□□ -0.82
SYNE1-204ENST00000367248 NHLH1Q02575 133 aa9.92□□□□□ -0.82
SYNE1-204ENST00000367248 LRRC75AQ8NAA5 344 aa9.92□□□□□ -0.82
SYNE1-204ENST00000367248 PHYHIPLQ96FC7 376 aa9.92□□□□□ -0.82
SYNE1-204ENST00000367248 WDYHV1Q96HA8 205 aa9.92□□□□□ -0.82
SYNE1-204ENST00000367248 J3QR06 171 aa9.92□□□□□ -0.82
SYNE1-204ENST00000367248 HSF4Q9ULV5 492 aa9.92□□□□□ -0.82
SYNE1-204ENST00000367248 RNASEK-C17orf49H0YIS7 233 aa9.92□□□□□ -0.82
SYNE1-204ENST00000367248 ABLIM2Q6H8Q1 611 aa9.92□□□□□ -0.82
SYNE1-204ENST00000367248 ZNRF1Q8ND25 227 aa9.92□□□□□ -0.82
SYNE1-204ENST00000367248 OR1L1Q8NH94 360 aa9.92□□□□□ -0.82
SYNE1-204ENST00000367248 PITPNC1Q9UKF7 332 aa9.92□□□□□ -0.82
SYNE1-204ENST00000367248 IGHV3OR16-13A0A075B7E8 117 aa9.92□□□□□ -0.82
SYNE1-204ENST00000367248 IGLV3-32A0A0A0MS00 114 aa9.92□□□□□ -0.82
SYNE1-204ENST00000367248 IGHV3-74A0A0B4J1X5 117 aa9.92□□□□□ -0.82
SYNE1-204ENST00000367248 NPY1RP25929 384 aa9.92□□□□□ -0.82
SYNE1-204ENST00000367248 ZNF154Q13106 437 aa9.92□□□□□ -0.82
SYNE1-204ENST00000367248 DGAT2L7PQ6IED9 249 aa9.92□□□□□ -0.82
SYNE1-204ENST00000367248 SCMH1Q96GD3 660 aa9.92□□□□□ -0.82
SYNE1-204ENST00000367248 ESPL1Q14674 2120 aa9.91□□□□□ -0.82
SYNE1-204ENST00000367248 NEURL1O76050 574 aa9.91□□□□□ -0.82
SYNE1-204ENST00000367248 SCTP09683 121 aa9.91□□□□□ -0.82
SYNE1-204ENST00000367248 FGF8P55075 233 aaPredicted RBP9.91□□□□□ -0.82
SYNE1-204ENST00000367248 STXBP6Q8NFX7 210 aa9.91□□□□□ -0.82
SYNE1-204ENST00000367248 Q96M66 194 aa9.91□□□□□ -0.82
SYNE1-204ENST00000367248 TECRQ9NZ01 308 aaKnown RBP9.91□□□□□ -0.82
SYNE1-204ENST00000367248 REG1AP05451 166 aa9.91□□□□□ -0.82
SYNE1-204ENST00000367248 RPL27AP46776 148 aaKnown RBP9.91□□□□□ -0.82
SYNE1-204ENST00000367248 ADAD2Q8NCV1 583 aaKnown RBP9.91□□□□□ -0.82
SYNE1-204ENST00000367248 ATP5SQ99766 215 aa9.91□□□□□ -0.82
SYNE1-204ENST00000367248 LEUTXA8MZ59 168 aa9.91□□□□□ -0.82
SYNE1-204ENST00000367248 WNT5AP41221 380 aa9.91□□□□□ -0.82
SYNE1-204ENST00000367248 TCTEX1D1Q8N7M0 179 aa9.91□□□□□ -0.82
SYNE1-204ENST00000367248 MYO7BQ6PIF6 2116 aa9.91□□□□□ -0.82
SYNE1-204ENST00000367248 A0A0G2JMZ2 1700 aa9.91□□□□□ -0.82
SYNE1-204ENST00000367248 C19orf67A6NJJ6 358 aa9.91□□□□□ -0.82
SYNE1-204ENST00000367248 LRRC37A2A6NM11 1700 aa9.91□□□□□ -0.82
SYNE1-204ENST00000367248 CXCL3P19876 107 aa9.91□□□□□ -0.82
SYNE1-204ENST00000367248 TMEM50BP56557 158 aa9.91□□□□□ -0.82
SYNE1-204ENST00000367248 FABP9Q0Z7S8 132 aa9.91□□□□□ -0.82
SYNE1-204ENST00000367248 RCC2Q9P258 522 aaKnown RBP9.91□□□□□ -0.82
SYNE1-204ENST00000367248 SLC25A17O43808 307 aa9.91□□□□□ -0.82
SYNE1-204ENST00000367248 RRN3P1Q2M238 152 aa9.91□□□□□ -0.82
SYNE1-204ENST00000367248 ST6GAL2Q96JF0 529 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms