RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 RNF222A6NCQ9 220 aa10.21□□□□□ -0.78
CDC42BPA-202ENST00000366764 DOK5Q9P104 306 aa10.21□□□□□ -0.78
CDC42BPA-202ENST00000366764 FGF16O43320 207 aa10.21□□□□□ -0.78
CDC42BPA-202ENST00000366764 CD1BP29016 333 aa10.21□□□□□ -0.78
CDC42BPA-202ENST00000366764 HES1Q14469 280 aa10.21□□□□□ -0.78
CDC42BPA-202ENST00000366764 GTF3AQ92664 365 aaKnown RBP10.21□□□□□ -0.78
CDC42BPA-202ENST00000366764 HSPB8Q9UJY1 196 aa10.21□□□□□ -0.78
CDC42BPA-202ENST00000366764 ZNF343Q6P1L6 599 aa10.21□□□□□ -0.78
CDC42BPA-202ENST00000366764 WDR31Q8NA23 367 aa10.21□□□□□ -0.78
CDC42BPA-202ENST00000366764 GSX1Q9H4S2 264 aaPredicted RBP10.21□□□□□ -0.78
CDC42BPA-202ENST00000366764 HEXA-AS1Q9H8Q6 139 aa10.21□□□□□ -0.78
CDC42BPA-202ENST00000366764 ACACBO00763 2458 aa10.21□□□□□ -0.78
CDC42BPA-202ENST00000366764 TAF15Q92804 592 aaKnown RBP eCLIP10.21□□□□□ -0.78
CDC42BPA-202ENST00000366764 RNF151Q2KHN1 245 aa10.2□□□□□ -0.78
CDC42BPA-202ENST00000366764 PQLC2Q6ZP29 291 aa10.2□□□□□ -0.78
CDC42BPA-202ENST00000366764 ZNF385AQ96PM9 386 aaKnown RBP10.2□□□□□ -0.78
CDC42BPA-202ENST00000366764 E9PQ18 207 aa10.2□□□□□ -0.78
CDC42BPA-202ENST00000366764 C1QL1O75973 258 aa10.2□□□□□ -0.78
CDC42BPA-202ENST00000366764 LYPD3O95274 346 aa10.2□□□□□ -0.78
CDC42BPA-202ENST00000366764 CFPP27918 469 aa10.2□□□□□ -0.78
CDC42BPA-202ENST00000366764 SRSF5Q13243 272 aaKnown RBP10.2□□□□□ -0.78
CDC42BPA-202ENST00000366764 SFXN3Q9BWM7 321 aa10.2□□□□□ -0.78
CDC42BPA-202ENST00000366764 SYNGR1O43759 233 aa10.2□□□□□ -0.78
CDC42BPA-202ENST00000366764 SELENOTP62341 195 aa10.2□□□□□ -0.78
CDC42BPA-202ENST00000366764 TMEM265A0A087WTH1 108 aa10.2□□□□□ -0.78
CDC42BPA-202ENST00000366764 CLDN14O95500 239 aa10.2□□□□□ -0.78
CDC42BPA-202ENST00000366764 PAGE4O60829 102 aa10.2□□□□□ -0.78
CDC42BPA-202ENST00000366764 FGF5P12034 268 aa10.2□□□□□ -0.78
CDC42BPA-202ENST00000366764 LY6G6FQ5SQ64 297 aa10.2□□□□□ -0.78
CDC42BPA-202ENST00000366764 ABHD3Q8WU67 409 aa10.2□□□□□ -0.78
CDC42BPA-202ENST00000366764 STARD4Q96DR4 205 aa10.2□□□□□ -0.78
CDC42BPA-202ENST00000366764 FAM117AQ9C073 453 aa10.2□□□□□ -0.78
CDC42BPA-202ENST00000366764 MRPS11P82912 194 aaKnown RBP10.2□□□□□ -0.78
CDC42BPA-202ENST00000366764 AMMECR1Q9Y4X0 333 aaPredicted RBP10.2□□□□□ -0.78
CDC42BPA-202ENST00000366764 TUSC5Q8IXB3 177 aa10.2□□□□□ -0.78
CDC42BPA-202ENST00000366764 OR2V2Q96R30 315 aa10.2□□□□□ -0.78
CDC42BPA-202ENST00000366764 SPG11Q96JI7 2443 aa10.2□□□□□ -0.78
CDC42BPA-202ENST00000366764 NDUFB3O43676 98 aa10.2□□□□□ -0.78
CDC42BPA-202ENST00000366764 CCL1P22362 96 aa10.2□□□□□ -0.78
CDC42BPA-202ENST00000366764 PSG4Q00888 419 aa10.2□□□□□ -0.78
CDC42BPA-202ENST00000366764 RFESDQ8TAC1 157 aa10.2□□□□□ -0.78
CDC42BPA-202ENST00000366764 ADAM11O75078 769 aa10.2□□□□□ -0.78
CDC42BPA-202ENST00000366764 TRGC2P03986 189 aa10.2□□□□□ -0.78
CDC42BPA-202ENST00000366764 PATE4P0C8F1 98 aa10.2□□□□□ -0.78
CDC42BPA-202ENST00000366764 OR5I1Q13606 314 aa10.2□□□□□ -0.78
CDC42BPA-202ENST00000366764 TMEM183AQ8IXX5 376 aa10.2□□□□□ -0.78
CDC42BPA-202ENST00000366764 THYN1Q9P016 225 aa10.2□□□□□ -0.78
CDC42BPA-202ENST00000366764 A0A1W2PP11 408 aa10.19□□□□□ -0.78
CDC42BPA-202ENST00000366764 SRSF10O75494 262 aaKnown RBP10.19□□□□□ -0.78
CDC42BPA-202ENST00000366764 KBTBD11O94819 623 aa10.19□□□□□ -0.78
CDC42BPA-202ENST00000366764 PRRX1P54821 245 aa10.19□□□□□ -0.78
CDC42BPA-202ENST00000366764 ZNF645Q8N7E2 425 aa10.19□□□□□ -0.78
CDC42BPA-202ENST00000366764 KCNAB3O43448 404 aa10.19□□□□□ -0.78
CDC42BPA-202ENST00000366764 USF1P22415 310 aaPredicted RBP10.19□□□□□ -0.78
CDC42BPA-202ENST00000366764 MED12LQ86YW9 2145 aa10.19□□□□□ -0.78
CDC42BPA-202ENST00000366764 PERPQ96FX8 193 aa10.19□□□□□ -0.78
CDC42BPA-202ENST00000366764 TRAV14DV4A0A0A6YYC5 116 aa10.19□□□□□ -0.78
CDC42BPA-202ENST00000366764 ZNF253O75346 499 aa10.19□□□□□ -0.78
CDC42BPA-202ENST00000366764 TGIF2LYQ8IUE0 185 aa10.19□□□□□ -0.78
CDC42BPA-202ENST00000366764 GGACTQ9BVM4 153 aa10.19□□□□□ -0.78
CDC42BPA-202ENST00000366764 THSD7BQ9C0I4 1608 aa10.19□□□□□ -0.78
CDC42BPA-202ENST00000366764 A0A0J9YW62 118 aa10.19□□□□□ -0.78
CDC42BPA-202ENST00000366764 CDIPTO14735 213 aa10.19□□□□□ -0.78
CDC42BPA-202ENST00000366764 SELENOHQ8IZQ5 122 aaKnown RBP10.19□□□□□ -0.78
CDC42BPA-202ENST00000366764 SLC25A5P05141 298 aaKnown RBP10.19□□□□□ -0.78
CDC42BPA-202ENST00000366764 FOLR2P14207 255 aa10.19□□□□□ -0.78
CDC42BPA-202ENST00000366764 GNB1P62873 340 aa10.19□□□□□ -0.78
CDC42BPA-202ENST00000366764 CT55Q8WUE5 264 aa10.19□□□□□ -0.78
CDC42BPA-202ENST00000366764 RSG1Q9BU20 258 aa10.19□□□□□ -0.78
CDC42BPA-202ENST00000366764 TRAV38-1A0A0B4J264 116 aa10.19□□□□□ -0.78
CDC42BPA-202ENST00000366764 OR1L8Q8NGR8 309 aa10.19□□□□□ -0.78
CDC42BPA-202ENST00000366764 ZNF552Q9H707 407 aaPredicted RBP10.19□□□□□ -0.78
CDC42BPA-202ENST00000366764 SAP30LQ9HAJ7 183 aa10.19□□□□□ -0.78
CDC42BPA-202ENST00000366764 BARX1Q9HBU1 254 aaPredicted RBP10.19□□□□□ -0.78
CDC42BPA-202ENST00000366764 NPVFQ9HCQ7 196 aa10.19□□□□□ -0.78
CDC42BPA-202ENST00000366764 IGHV3-64DA0A0J9YX35 117 aa10.19□□□□□ -0.78
CDC42BPA-202ENST00000366764 DNASE2O00115 360 aaPredicted RBP10.19□□□□□ -0.78
CDC42BPA-202ENST00000366764 HTR1DP28221 377 aa10.19□□□□□ -0.78
CDC42BPA-202ENST00000366764 P2RY6Q15077 328 aa10.19□□□□□ -0.78
CDC42BPA-202ENST00000366764 FNDC7Q5VTL7 733 aa10.19□□□□□ -0.78
CDC42BPA-202ENST00000366764 OR1A1Q9P1Q5 309 aa10.19□□□□□ -0.78
CDC42BPA-202ENST00000366764 TNFRSF9Q07011 255 aa10.18□□□□□ -0.78
CDC42BPA-202ENST00000366764 NPIPB7O75200 414 aa10.18□□□□□ -0.78
CDC42BPA-202ENST00000366764 SLC23A3Q6PIS1 610 aa10.18□□□□□ -0.78
CDC42BPA-202ENST00000366764 ARHGAP21Q5T5U3 1957 aa10.18□□□□□ -0.78
CDC42BPA-202ENST00000366764 A6NDN8 102 aa10.18□□□□□ -0.78
CDC42BPA-202ENST00000366764 MYF5P13349 255 aa10.18□□□□□ -0.78
CDC42BPA-202ENST00000366764 UCP1P25874 307 aa10.18□□□□□ -0.78
CDC42BPA-202ENST00000366764 OR1L6Q8NGR2 347 aa10.18□□□□□ -0.78
CDC42BPA-202ENST00000366764 NAGKQ9UJ70 344 aa10.18□□□□□ -0.78
CDC42BPA-202ENST00000366764 MKRN2OSH3BPM6 223 aa10.18□□□□□ -0.78
CDC42BPA-202ENST00000366764 RUNX1Q01196 453 aa10.18□□□□□ -0.78
CDC42BPA-202ENST00000366764 TMEM108Q6UXF1 575 aa10.18□□□□□ -0.78
CDC42BPA-202ENST00000366764 GP6Q9HCN6 339 aa10.18□□□□□ -0.78
CDC42BPA-202ENST00000366764 DYRK2Q92630 601 aa10.18□□□□□ -0.78
CDC42BPA-202ENST00000366764 ZNF665Q9H7R5 613 aa10.18□□□□□ -0.78
CDC42BPA-202ENST00000366764 ZNF355PQ9NSJ1 428 aa10.18□□□□□ -0.78
CDC42BPA-202ENST00000366764 TRAV9-1A0A075B6T8 112 aa10.18□□□□□ -0.78
CDC42BPA-202ENST00000366764 SLC25A53Q5H9E4 307 aa10.18□□□□□ -0.78
CDC42BPA-202ENST00000366764 DEFB108BQ8NET1 73 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms