RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 IFI27L2Q9H2X8 130 aa11.18□□□□□ -0.62
NSMCE1-201ENST00000361439 OR2W1Q9Y3N9 320 aa11.18□□□□□ -0.62
NSMCE1-201ENST00000361439 A0A1W2PPE3 182 aa11.17□□□□□ -0.62
NSMCE1-201ENST00000361439 MEIS3P1A6NDR6 274 aa11.17□□□□□ -0.62
NSMCE1-201ENST00000361439 BTBD17A6NE02 478 aa11.17□□□□□ -0.62
NSMCE1-201ENST00000361439 ZNF736B4DX44 427 aaPredicted RBP11.17□□□□□ -0.62
NSMCE1-201ENST00000361439 SLC31A2O15432 143 aa11.17□□□□□ -0.62
NSMCE1-201ENST00000361439 LANCL1O43813 399 aa11.17□□□□□ -0.62
NSMCE1-201ENST00000361439 TUSC2O75896 110 aa11.17□□□□□ -0.62
NSMCE1-201ENST00000361439 CSF1P09603 554 aa11.17□□□□□ -0.62
NSMCE1-201ENST00000361439 BRS3P32247 399 aa11.17□□□□□ -0.62
NSMCE1-201ENST00000361439 BAMBIQ13145 260 aa11.17□□□□□ -0.62
NSMCE1-201ENST00000361439 DYRK1AQ13627 763 aa11.17□□□□□ -0.62
NSMCE1-201ENST00000361439 PLA1AQ53H76 456 aa11.17□□□□□ -0.62
NSMCE1-201ENST00000361439 VAX1Q5SQQ9 334 aa11.17□□□□□ -0.62
NSMCE1-201ENST00000361439 DHRS11Q6UWP2 260 aa11.17□□□□□ -0.62
NSMCE1-201ENST00000361439 LIAT1Q6ZQX7 453 aa11.17□□□□□ -0.62
NSMCE1-201ENST00000361439 THNSL2Q86YJ6 484 aa11.17□□□□□ -0.62
NSMCE1-201ENST00000361439 ODF3L1Q8IXM7 274 aa11.17□□□□□ -0.62
NSMCE1-201ENST00000361439 LYG1Q8N1E2 194 aa11.17□□□□□ -0.62
NSMCE1-201ENST00000361439 GDPD1Q8N9F7 314 aa11.17□□□□□ -0.62
NSMCE1-201ENST00000361439 TMEM229BQ8NBD8 167 aa11.17□□□□□ -0.62
NSMCE1-201ENST00000361439 OR5H2Q8NGV7 314 aa11.17□□□□□ -0.62
NSMCE1-201ENST00000361439 ZFAND2BQ8WV99 257 aa11.17□□□□□ -0.62
NSMCE1-201ENST00000361439 C17orf50Q8WW18 174 aa11.17□□□□□ -0.62
NSMCE1-201ENST00000361439 TOMM40LQ969M1 308 aa11.17□□□□□ -0.62
NSMCE1-201ENST00000361439 KLK11Q9UBX7 282 aa11.17□□□□□ -0.62
NSMCE1-201ENST00000361439 ZNF221Q9UK13 617 aa11.17□□□□□ -0.62
NSMCE1-201ENST00000361439 HSD17B6O14756 317 aa11.16□□□□□ -0.62
NSMCE1-201ENST00000361439 CD74P04233 296 aa11.16□□□□□ -0.62
NSMCE1-201ENST00000361439 LUMP51884 338 aaPredicted RBP11.16□□□□□ -0.62
NSMCE1-201ENST00000361439 TAS2R19P59542 299 aa11.16□□□□□ -0.62
NSMCE1-201ENST00000361439 RPL15P61313 204 aaKnown RBP11.16□□□□□ -0.62
NSMCE1-201ENST00000361439 DGCR2P98153 550 aa11.16□□□□□ -0.62
NSMCE1-201ENST00000361439 HABP2Q14520 560 aaPredicted RBP11.16□□□□□ -0.62
NSMCE1-201ENST00000361439 MSMO1Q15800 293 aa11.16□□□□□ -0.62
NSMCE1-201ENST00000361439 FAM53AQ6NSI3 398 aaPredicted RBP11.16□□□□□ -0.62
NSMCE1-201ENST00000361439 ZNF833PQ6ZTB9 187 aa11.16□□□□□ -0.62
NSMCE1-201ENST00000361439 TGIF2LXQ8IUE1 241 aa11.16□□□□□ -0.62
NSMCE1-201ENST00000361439 RTN4IP1Q8WWV3 396 aaPredicted RBP11.16□□□□□ -0.62
NSMCE1-201ENST00000361439 ABCB10Q9NRK6 738 aa11.16□□□□□ -0.62
NSMCE1-201ENST00000361439 HILPDAQ9Y5L2 63 aa11.16□□□□□ -0.62
NSMCE1-201ENST00000361439 SOX21Q9Y651 276 aaPredicted RBP11.16□□□□□ -0.62
NSMCE1-201ENST00000361439 SAA2-SAA4A0A096LPE2 208 aa11.15□□□□□ -0.62
NSMCE1-201ENST00000361439 ST8SIA5O15466 376 aa11.15□□□□□ -0.62
NSMCE1-201ENST00000361439 SAA2P0DJI9 122 aaPredicted RBP11.15□□□□□ -0.62
NSMCE1-201ENST00000361439 HLA-DMAP28067 261 aa11.15□□□□□ -0.62
NSMCE1-201ENST00000361439 FCGR2CP31995 323 aa11.15□□□□□ -0.62
NSMCE1-201ENST00000361439 HRH1P35367 487 aa11.15□□□□□ -0.62
NSMCE1-201ENST00000361439 RFX2P48378 723 aa11.15□□□□□ -0.62
NSMCE1-201ENST00000361439 RIPPLY3P57055 190 aa11.15□□□□□ -0.62
NSMCE1-201ENST00000361439 AP3S2P59780 193 aa11.15□□□□□ -0.62
NSMCE1-201ENST00000361439 MEF2DQ14814 521 aa11.15□□□□□ -0.62
NSMCE1-201ENST00000361439 ZNF79Q15937 498 aa11.15□□□□□ -0.62
NSMCE1-201ENST00000361439 PYDC2Q56P42 97 aa11.15□□□□□ -0.62
NSMCE1-201ENST00000361439 DYNAPQ8N1N2 210 aa11.15□□□□□ -0.62
NSMCE1-201ENST00000361439 Q8N402 240 aa11.15□□□□□ -0.62
NSMCE1-201ENST00000361439 ARRDC1Q8N5I2 433 aa11.15□□□□□ -0.62
NSMCE1-201ENST00000361439 S100ZQ8WXG8 99 aa11.15□□□□□ -0.62
NSMCE1-201ENST00000361439 BORCS5Q969J3 196 aa11.15□□□□□ -0.62
NSMCE1-201ENST00000361439 SSX3Q99909 188 aa11.15□□□□□ -0.62
NSMCE1-201ENST00000361439 THAP7Q9BT49 309 aaPredicted RBP11.15□□□□□ -0.62
NSMCE1-201ENST00000361439 EHFQ9NZC4 300 aa11.15□□□□□ -0.62
NSMCE1-201ENST00000361439 PITPNC1Q9UKF7 332 aa11.15□□□□□ -0.62
NSMCE1-201ENST00000361439 RBM7Q9Y580 266 aaKnown RBP11.15□□□□□ -0.62
NSMCE1-201ENST00000361439 IGHV1-3A0A0C4DH29 117 aa11.14□□□□□ -0.63
NSMCE1-201ENST00000361439 MDFIC2A0A1B0GVS7 189 aa11.14□□□□□ -0.63
NSMCE1-201ENST00000361439 A0A1W2PPI3 338 aa11.14□□□□□ -0.63
NSMCE1-201ENST00000361439 FAM90A9PA6NNJ1 464 aa11.14□□□□□ -0.63
NSMCE1-201ENST00000361439 TRIM77I1YAP6 450 aa11.14□□□□□ -0.63
NSMCE1-201ENST00000361439 HOXA3O43365 443 aaPredicted RBP11.14□□□□□ -0.63
NSMCE1-201ENST00000361439 PPYP01298 95 aa11.14□□□□□ -0.63
NSMCE1-201ENST00000361439 OR8U9P0C7N5 309 aa11.14□□□□□ -0.63
NSMCE1-201ENST00000361439 FAM106CPP0CH98 169 aa11.14□□□□□ -0.63
NSMCE1-201ENST00000361439 NFYAP23511 347 aaPredicted RBP11.14□□□□□ -0.63
NSMCE1-201ENST00000361439 CD1BP29016 333 aa11.14□□□□□ -0.63
NSMCE1-201ENST00000361439 GPR12P47775 334 aa11.14□□□□□ -0.63
NSMCE1-201ENST00000361439 TAGLNQ01995 201 aaKnown RBP11.14□□□□□ -0.63
NSMCE1-201ENST00000361439 SLC9A3R2Q15599 337 aa11.14□□□□□ -0.63
NSMCE1-201ENST00000361439 RNASE10Q5GAN6 216 aaKnown RBP11.14□□□□□ -0.63
NSMCE1-201ENST00000361439 ZNF660Q6AZW8 331 aaPredicted RBP11.14□□□□□ -0.63
NSMCE1-201ENST00000361439 TMEM17Q86X19 198 aa11.14□□□□□ -0.63
NSMCE1-201ENST00000361439 ZNF645Q8N7E2 425 aa11.14□□□□□ -0.63
NSMCE1-201ENST00000361439 ZDHHC22Q8N966 263 aa11.14□□□□□ -0.63
NSMCE1-201ENST00000361439 OR6F1Q8NGZ6 308 aa11.14□□□□□ -0.63
NSMCE1-201ENST00000361439 OR8U1Q8NH10 309 aa11.14□□□□□ -0.63
NSMCE1-201ENST00000361439 ZNF251Q9BRH9 671 aa11.14□□□□□ -0.63
NSMCE1-201ENST00000361439 SRRQ9GZT4 340 aa11.14□□□□□ -0.63
NSMCE1-201ENST00000361439 PARP12Q9H0J9 701 aaKnown RBP11.14□□□□□ -0.63
NSMCE1-201ENST00000361439 RAB18Q9NP72 206 aa11.14□□□□□ -0.63
NSMCE1-201ENST00000361439 VPREB3Q9UKI3 123 aa11.14□□□□□ -0.63
NSMCE1-201ENST00000361439 ANKRD20A5PA0PJZ0 165 aa11.13□□□□□ -0.63
NSMCE1-201ENST00000361439 DNAJC9-AS1A6NH13 148 aa11.13□□□□□ -0.63
NSMCE1-201ENST00000361439 IGHV4-59P01825 116 aa11.13□□□□□ -0.63
NSMCE1-201ENST00000361439 PMP2P02689 132 aa11.13□□□□□ -0.63
NSMCE1-201ENST00000361439 CD3DP04234 171 aa11.13□□□□□ -0.63
NSMCE1-201ENST00000361439 IFNA6P05013 189 aa11.13□□□□□ -0.63
NSMCE1-201ENST00000361439 RNASE1P07998 156 aaKnown RBP11.13□□□□□ -0.63
NSMCE1-201ENST00000361439 AKAIN1P0CW23 69 aa11.13□□□□□ -0.63
NSMCE1-201ENST00000361439 TSPAN5P62079 268 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms