RNA–Protein interactions for RNA: ENST00000360001.10

SDF4-202, Transcript of stromal cell derived factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SDF4, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-202ENST00000360001 ZNF525Q8N782 197 aa19.06■□□□□ 0.64
SDF4-202ENST00000360001 OR51H1Q8NH63 302 aa19.06■□□□□ 0.64
SDF4-202ENST00000360001 SEC22AQ96IW7 307 aa19.06■□□□□ 0.64
SDF4-202ENST00000360001 MPTX1A8MV57 137 aa19.06■□□□□ 0.64
SDF4-202ENST00000360001 F5H0A9 414 aaPredicted RBP19.06■□□□□ 0.64
SDF4-202ENST00000360001 ITGB1BP1O14713 200 aa19.06■□□□□ 0.64
SDF4-202ENST00000360001 SLC31A2O15432 143 aa19.06■□□□□ 0.64
SDF4-202ENST00000360001 HOXB5P09067 269 aa19.06■□□□□ 0.64
SDF4-202ENST00000360001 LGI3Q8N145 548 aa19.06■□□□□ 0.64
SDF4-202ENST00000360001 NARFLQ9H6Q4 476 aa19.06■□□□□ 0.64
SDF4-202ENST00000360001 UCP1P25874 307 aa19.05■□□□□ 0.64
SDF4-202ENST00000360001 ZNF439Q8NDP4 499 aa19.05■□□□□ 0.64
SDF4-202ENST00000360001 OR11H4Q8NGC9 324 aa19.05■□□□□ 0.64
SDF4-202ENST00000360001 C18orf12Q96KH6 178 aa19.05■□□□□ 0.64
SDF4-202ENST00000360001 PDCD10Q9BUL8 212 aa19.05■□□□□ 0.64
SDF4-202ENST00000360001 IFI27L2Q9H2X8 130 aa19.05■□□□□ 0.64
SDF4-202ENST00000360001 RANBP3Q9H6Z4 567 aaPredicted RBP19.05■□□□□ 0.64
SDF4-202ENST00000360001 METTL8Q9H825 291 aaKnown RBP19.05■□□□□ 0.64
SDF4-202ENST00000360001 SDHAF2Q9NX18 166 aa19.05■□□□□ 0.64
SDF4-202ENST00000360001 C13orf42A0A1B0GVH6 325 aa19.04■□□□□ 0.64
SDF4-202ENST00000360001 C5orf51A6NDU8 294 aa19.04■□□□□ 0.64
SDF4-202ENST00000360001 DNASE1P24855 282 aa19.04■□□□□ 0.64
SDF4-202ENST00000360001 COL8A1P27658 744 aa19.04■□□□□ 0.64
SDF4-202ENST00000360001 CT45A1Q5HYN5 189 aa19.04■□□□□ 0.64
SDF4-202ENST00000360001 GSG1LQ6UXU4 331 aa19.04■□□□□ 0.64
SDF4-202ENST00000360001 CT45A3Q8NHU0 189 aa19.04■□□□□ 0.64
SDF4-202ENST00000360001 TMEM56Q96MV1 263 aa19.04■□□□□ 0.64
SDF4-202ENST00000360001 ABHD14AQ9BUJ0 271 aa19.04■□□□□ 0.64
SDF4-202ENST00000360001 TMEM56-RWDD3S4R434 201 aa19.04■□□□□ 0.64
SDF4-202ENST00000360001 LYZL2Q7Z4W2 148 aa19.04■□□□□ 0.64
SDF4-202ENST00000360001 C8orf46Q8TAG6 207 aa19.04■□□□□ 0.64
SDF4-202ENST00000360001 SPG11Q96JI7 2443 aa19.03■□□□□ 0.64
SDF4-202ENST00000360001 CDS2O95674 445 aa19.03■□□□□ 0.64
SDF4-202ENST00000360001 SRPXP78539 464 aa19.03■□□□□ 0.64
SDF4-202ENST00000360001 OR10C1Q96KK4 312 aa19.03■□□□□ 0.64
SDF4-202ENST00000360001 HYLS1Q96M11 299 aa19.03■□□□□ 0.64
SDF4-202ENST00000360001 A0A1W2PPE3 182 aa19.02■□□□□ 0.64
SDF4-202ENST00000360001 B3GALNT1O75752 331 aa19.02■□□□□ 0.64
SDF4-202ENST00000360001 GPR12P47775 334 aa19.02■□□□□ 0.64
SDF4-202ENST00000360001 Q3ZCU0 254 aa19.02■□□□□ 0.64
SDF4-202ENST00000360001 TMEM268Q5VZI3 342 aa19.02■□□□□ 0.64
SDF4-202ENST00000360001 GGNBP1Q5YKI7 109 aa19.02■□□□□ 0.64
SDF4-202ENST00000360001 C11orf42Q8N5U0 333 aa19.02■□□□□ 0.64
SDF4-202ENST00000360001 PROP1O75360 226 aa19.02■□□□□ 0.64
SDF4-202ENST00000360001 RAB7AP51149 207 aa19.02■□□□□ 0.64
SDF4-202ENST00000360001 RPL30P62888 115 aaKnown RBP19.02■□□□□ 0.64
SDF4-202ENST00000360001 BTNL3Q6UXE8 466 aa19.02■□□□□ 0.64
SDF4-202ENST00000360001 SELENOHQ8IZQ5 122 aaKnown RBP19.02■□□□□ 0.64
SDF4-202ENST00000360001 SLC35G3Q8N808 338 aa19.02■□□□□ 0.64
SDF4-202ENST00000360001 NRGNQ92686 78 aa19.02■□□□□ 0.64
SDF4-202ENST00000360001 LIN7CQ9NUP9 197 aaKnown RBP19.02■□□□□ 0.64
SDF4-202ENST00000360001 GNB2P62879 340 aa19.01■□□□□ 0.63
SDF4-202ENST00000360001 FBN2P35556 2912 aa19.01■□□□□ 0.63
SDF4-202ENST00000360001 RNF212BA8MTL3 300 aa19.01■□□□□ 0.63
SDF4-202ENST00000360001 C17orf98A8MV24 154 aa19.01■□□□□ 0.63
SDF4-202ENST00000360001 C22orf46C9J442 243 aa19.01■□□□□ 0.63
SDF4-202ENST00000360001 IFNA21P01568 189 aa19.01■□□□□ 0.63
SDF4-202ENST00000360001 GNG10P50151 68 aa19.01■□□□□ 0.63
SDF4-202ENST00000360001 SLC25A48Q6ZT89 311 aaKnown RBP19.01■□□□□ 0.63
SDF4-202ENST00000360001 LY6G5BQ8NDX9 201 aa19.01■□□□□ 0.63
SDF4-202ENST00000360001 NMES1Q9C002 83 aa19.01■□□□□ 0.63
SDF4-202ENST00000360001 BPESC1Q9GZL8 116 aa19.01■□□□□ 0.63
SDF4-202ENST00000360001 PPIAL4CA0A0B4J2A2 164 aa19■□□□□ 0.63
SDF4-202ENST00000360001 PPIAL4GP0DN37 164 aa19■□□□□ 0.63
SDF4-202ENST00000360001 ZNF16P17020 682 aaPredicted RBP19■□□□□ 0.63
SDF4-202ENST00000360001 PDLIM4P50479 330 aa19■□□□□ 0.63
SDF4-202ENST00000360001 ZNF695Q8IW36 515 aa19■□□□□ 0.63
SDF4-202ENST00000360001 C2orf50Q96LR7 162 aa19■□□□□ 0.63
SDF4-202ENST00000360001 SSBP3Q9BWW4 388 aaPredicted RBP19■□□□□ 0.63
SDF4-202ENST00000360001 GAB2Q9UQC2 676 aa19■□□□□ 0.63
SDF4-202ENST00000360001 TRAV14DV4A0A0A6YYC5 116 aa18.99■□□□□ 0.63
SDF4-202ENST00000360001 ZNF585BQ52M93 769 aa18.99■□□□□ 0.63
SDF4-202ENST00000360001 RPL39P5Q59GN2 51 aa18.99■□□□□ 0.63
SDF4-202ENST00000360001 ZNF66Q6ZN08 573 aa18.99■□□□□ 0.63
SDF4-202ENST00000360001 C1orf229Q6ZS94 237 aaPredicted RBP18.99■□□□□ 0.63
SDF4-202ENST00000360001 ODF3L1Q8IXM7 274 aa18.99■□□□□ 0.63
SDF4-202ENST00000360001 PPP1R1CQ8WVI7 109 aa18.99■□□□□ 0.63
SDF4-202ENST00000360001 RBPMSQ93062 196 aaKnown RBP18.99■□□□□ 0.63
SDF4-202ENST00000360001 IL22RA2Q969J5 263 aa18.99■□□□□ 0.63
SDF4-202ENST00000360001 ARID1AO14497 2285 aa18.99■□□□□ 0.63
SDF4-202ENST00000360001 IGHV2-5P01817 119 aa18.99■□□□□ 0.63
SDF4-202ENST00000360001 SERPINE2P07093 398 aa18.99■□□□□ 0.63
SDF4-202ENST00000360001 IGHV1-8P0DP01 117 aa18.99■□□□□ 0.63
SDF4-202ENST00000360001 GRPEL2Q8TAA5 225 aa18.99■□□□□ 0.63
SDF4-202ENST00000360001 RAB39BQ96DA2 213 aa18.99■□□□□ 0.63
SDF4-202ENST00000360001 HSD17B10Q99714 261 aaKnown RBP18.99■□□□□ 0.63
SDF4-202ENST00000360001 TMED3Q9Y3Q3 217 aa18.99■□□□□ 0.63
SDF4-202ENST00000360001 HELZ2Q9BYK8 2649 aaKnown RBP18.98■□□□□ 0.63
SDF4-202ENST00000360001 CELSR2Q9HCU4 2923 aa18.98■□□□□ 0.63
SDF4-202ENST00000360001 LINC00473A8K010 186 aa18.98■□□□□ 0.63
SDF4-202ENST00000360001 ATP5J2P56134 94 aa18.98■□□□□ 0.63
SDF4-202ENST00000360001 LINC00205P59089 165 aa18.98■□□□□ 0.63
SDF4-202ENST00000360001 CYCSP99999 105 aaKnown RBP18.98■□□□□ 0.63
SDF4-202ENST00000360001 CATR1Q13166 79 aa18.98■□□□□ 0.63
SDF4-202ENST00000360001 IL15RAQ13261 267 aa18.98■□□□□ 0.63
SDF4-202ENST00000360001 IAH1Q2TAA2 248 aaPredicted RBP18.98■□□□□ 0.63
SDF4-202ENST00000360001 ESCO2Q56NI9 601 aa18.98■□□□□ 0.63
SDF4-202ENST00000360001 ASH1LQ9NR48 2969 aaKnown RBP18.98■□□□□ 0.63
SDF4-202ENST00000360001 ZNRD1Q9P1U0 126 aa18.98■□□□□ 0.63
SDF4-202ENST00000360001 CENPEQ02224 2701 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms