RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 TMEM17Q86X19 198 aa12.37□□□□□ -0.43
TPM1-206ENST00000358278 OR4D10Q8NGI6 311 aa12.37□□□□□ -0.43
TPM1-206ENST00000358278 OR8U1Q8NH10 309 aa12.37□□□□□ -0.43
TPM1-206ENST00000358278 RPEQ96AT9 228 aa12.37□□□□□ -0.43
TPM1-206ENST00000358278 ZNF2Q9BSG1 426 aaPredicted RBP12.37□□□□□ -0.43
TPM1-206ENST00000358278 OR2D2Q9H210 308 aa12.37□□□□□ -0.43
TPM1-206ENST00000358278 IFI27L2Q9H2X8 130 aa12.37□□□□□ -0.43
TPM1-206ENST00000358278 PPYP01298 95 aa12.36□□□□□ -0.43
TPM1-206ENST00000358278 AMY2AP04746 511 aa12.36□□□□□ -0.43
TPM1-206ENST00000358278 FBP1P09467 338 aa12.36□□□□□ -0.43
TPM1-206ENST00000358278 IL7P13232 177 aa12.36□□□□□ -0.43
TPM1-206ENST00000358278 AADACP22760 399 aa12.36□□□□□ -0.43
TPM1-206ENST00000358278 FAUP35544 74 aaKnown RBP12.36□□□□□ -0.43
TPM1-206ENST00000358278 LUMP51884 338 aaPredicted RBP12.36□□□□□ -0.43
TPM1-206ENST00000358278 FXYD4P59646 89 aa12.36□□□□□ -0.43
TPM1-206ENST00000358278 SSX2Q16385 188 aa12.36□□□□□ -0.43
TPM1-206ENST00000358278 FAAP20Q6NZ36 180 aa12.36□□□□□ -0.43
TPM1-206ENST00000358278 C9orf139Q6ZV77 190 aa12.36□□□□□ -0.43
TPM1-206ENST00000358278 BCL6BQ8N143 479 aaPredicted RBP12.36□□□□□ -0.43
TPM1-206ENST00000358278 OR4C16Q8NGL9 310 aa12.36□□□□□ -0.43
TPM1-206ENST00000358278 OR6F1Q8NGZ6 308 aa12.36□□□□□ -0.43
TPM1-206ENST00000358278 FAM216AQ8WUB2 273 aa12.36□□□□□ -0.43
TPM1-206ENST00000358278 TOMM40LQ969M1 308 aa12.36□□□□□ -0.43
TPM1-206ENST00000358278 ABHD14BQ96IU4 210 aa12.36□□□□□ -0.43
TPM1-206ENST00000358278 TSC22D3Q99576 134 aa12.36□□□□□ -0.43
TPM1-206ENST00000358278 PIPOXQ9P0Z9 390 aa12.36□□□□□ -0.43
TPM1-206ENST00000358278 ZNF221Q9UK13 617 aa12.36□□□□□ -0.43
TPM1-206ENST00000358278 RNF150Q9ULK6 438 aa12.36□□□□□ -0.43
TPM1-206ENST00000358278 HILPDAQ9Y5L2 63 aa12.36□□□□□ -0.43
TPM1-206ENST00000358278 CUBNO60494 3623 aa12.36□□□□□ -0.43
TPM1-206ENST00000358278 SAA2-SAA4A0A096LPE2 208 aa12.35□□□□□ -0.43
TPM1-206ENST00000358278 RAB29O14966 203 aa12.35□□□□□ -0.43
TPM1-206ENST00000358278 TUSC2O75896 110 aa12.35□□□□□ -0.43
TPM1-206ENST00000358278 SAA2P0DJI9 122 aaPredicted RBP12.35□□□□□ -0.43
TPM1-206ENST00000358278 GPR12P47775 334 aa12.35□□□□□ -0.43
TPM1-206ENST00000358278 KLF9Q13886 244 aaPredicted RBP12.35□□□□□ -0.43
TPM1-206ENST00000358278 LDLRAD2Q5SZI1 272 aa12.35□□□□□ -0.43
TPM1-206ENST00000358278 ARRDC1Q8N5I2 433 aa12.35□□□□□ -0.43
TPM1-206ENST00000358278 C17orf50Q8WW18 174 aa12.35□□□□□ -0.43
TPM1-206ENST00000358278 GIMAP1Q8WWP7 306 aa12.35□□□□□ -0.43
TPM1-206ENST00000358278 MALSU1Q96EH3 234 aa12.35□□□□□ -0.43
TPM1-206ENST00000358278 AGMATQ9BSE5 352 aa12.35□□□□□ -0.43
TPM1-206ENST00000358278 MCUBQ9NWR8 336 aa12.35□□□□□ -0.43
TPM1-206ENST00000358278 SOX21Q9Y651 276 aaPredicted RBP12.35□□□□□ -0.43
TPM1-206ENST00000358278 DISC1C4P0D8 188 aa12.34□□□□□ -0.43
TPM1-206ENST00000358278 HSD17B6O14756 317 aa12.34□□□□□ -0.43
TPM1-206ENST00000358278 CRLF1O75462 422 aa12.34□□□□□ -0.43
TPM1-206ENST00000358278 SCGB2B2Q4G0G5 96 aa12.34□□□□□ -0.43
TPM1-206ENST00000358278 TPTE2P1Q5T6R2 138 aa12.34□□□□□ -0.43
TPM1-206ENST00000358278 DHRS11Q6UWP2 260 aa12.34□□□□□ -0.43
TPM1-206ENST00000358278 OR56B4Q8NH76 319 aa12.34□□□□□ -0.43
TPM1-206ENST00000358278 SLC6A7Q99884 636 aa12.34□□□□□ -0.43
TPM1-206ENST00000358278 GHITMQ9H3K2 345 aa12.34□□□□□ -0.43
TPM1-206ENST00000358278 SETD2Q9BYW2 2564 aaPredicted RBP12.34□□□□□ -0.43
TPM1-206ENST00000358278 IGKV1D-13A0A0B4J2D9 117 aa12.34□□□□□ -0.43
TPM1-206ENST00000358278 IGKV1-13P0DP09 117 aa12.34□□□□□ -0.43
TPM1-206ENST00000358278 PAX6P26367 422 aa12.34□□□□□ -0.43
TPM1-206ENST00000358278 REG1BP48304 166 aa12.34□□□□□ -0.43
TPM1-206ENST00000358278 ARHGDIBP52566 201 aa12.34□□□□□ -0.43
TPM1-206ENST00000358278 ZNF137PP52743 207 aa12.34□□□□□ -0.43
TPM1-206ENST00000358278 DEFB112Q30KQ8 113 aa12.34□□□□□ -0.43
TPM1-206ENST00000358278 PLA1AQ53H76 456 aa12.34□□□□□ -0.43
TPM1-206ENST00000358278 ZNF660Q6AZW8 331 aaPredicted RBP12.34□□□□□ -0.43
TPM1-206ENST00000358278 ODF3L1Q8IXM7 274 aa12.34□□□□□ -0.43
TPM1-206ENST00000358278 SECTM1Q8WVN6 248 aa12.34□□□□□ -0.43
TPM1-206ENST00000358278 DEDD2Q8WXF8 326 aa12.34□□□□□ -0.43
TPM1-206ENST00000358278 S1PR3Q99500 378 aa12.34□□□□□ -0.43
TPM1-206ENST00000358278 ABCB10Q9NRK6 738 aa12.34□□□□□ -0.43
TPM1-206ENST00000358278 LINC00854A0A1B0GVQ3 168 aa12.33□□□□□ -0.44
TPM1-206ENST00000358278 MDFIC2A0A1B0GVS7 189 aa12.33□□□□□ -0.44
TPM1-206ENST00000358278 LY6LH3BQJ8 138 aa12.33□□□□□ -0.44
TPM1-206ENST00000358278 FAM157CP0CG43 387 aa12.33□□□□□ -0.44
TPM1-206ENST00000358278 DIAPH2-AS1Q14236 149 aa12.33□□□□□ -0.44
TPM1-206ENST00000358278 RPL39P5Q59GN2 51 aa12.33□□□□□ -0.44
TPM1-206ENST00000358278 CCDC144NLQ6NUI1 221 aa12.33□□□□□ -0.44
TPM1-206ENST00000358278 TGIF2LXQ8IUE1 241 aa12.33□□□□□ -0.44
TPM1-206ENST00000358278 ZDHHC16Q969W1 377 aa12.33□□□□□ -0.44
TPM1-206ENST00000358278 MOB3AQ96BX8 217 aa12.33□□□□□ -0.44
TPM1-206ENST00000358278 AJUBAQ96IF1 538 aa12.33□□□□□ -0.44
TPM1-206ENST00000358278 SLC5A7Q9GZV3 580 aa12.33□□□□□ -0.44
TPM1-206ENST00000358278 OCEL1Q9H607 264 aa12.33□□□□□ -0.44
TPM1-206ENST00000358278 NF1P21359 2839 aa12.32□□□□□ -0.44
TPM1-206ENST00000358278 OOSP1A8MZH6 123 aa12.32□□□□□ -0.44
TPM1-206ENST00000358278 TXNL1O43396 289 aa12.32□□□□□ -0.44
TPM1-206ENST00000358278 GAPDHP04406 335 aaKnown RBP12.32□□□□□ -0.44
TPM1-206ENST00000358278 RBMS3Q6XE24 437 aaKnown RBP12.32□□□□□ -0.44
TPM1-206ENST00000358278 LDLRAD3Q86YD5 345 aa12.32□□□□□ -0.44
TPM1-206ENST00000358278 DYNAPQ8N1N2 210 aa12.32□□□□□ -0.44
TPM1-206ENST00000358278 ZNF645Q8N7E2 425 aa12.32□□□□□ -0.44
TPM1-206ENST00000358278 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.32□□□□□ -0.44
TPM1-206ENST00000358278 OR51S1Q8NGJ8 323 aa12.32□□□□□ -0.44
TPM1-206ENST00000358278 RTN4IP1Q8WWV3 396 aaPredicted RBP12.32□□□□□ -0.44
TPM1-206ENST00000358278 ST6GALNAC6Q969X2 333 aa12.32□□□□□ -0.44
TPM1-206ENST00000358278 PRRT1Q99946 306 aa12.32□□□□□ -0.44
TPM1-206ENST00000358278 FXYD6Q9H0Q3 95 aa12.32□□□□□ -0.44
TPM1-206ENST00000358278 HRASLSQ9HDD0 168 aa12.32□□□□□ -0.44
TPM1-206ENST00000358278 OR5H14A6NHG9 310 aa12.31□□□□□ -0.44
TPM1-206ENST00000358278 CENPXA8MT69 81 aa12.31□□□□□ -0.44
TPM1-206ENST00000358278 UPK1BO75841 260 aa12.31□□□□□ -0.44
TPM1-206ENST00000358278 SLC22A5O76082 557 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms