RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 SPINK2P20155 84 aa10.17□□□□□ -0.78
COL9A1-202ENST00000357250 ERVFRD-1P60508 538 aa10.17□□□□□ -0.78
COL9A1-202ENST00000357250 CBLN2Q8IUK8 224 aa10.17□□□□□ -0.78
COL9A1-202ENST00000357250 SSMEM1Q8WWF3 244 aa10.17□□□□□ -0.78
COL9A1-202ENST00000357250 FAM206AQ9NX38 181 aa10.17□□□□□ -0.78
COL9A1-202ENST00000357250 CDC42EP3Q9UKI2 254 aa10.17□□□□□ -0.78
COL9A1-202ENST00000357250 OR10J1P30954 320 aa10.17□□□□□ -0.78
COL9A1-202ENST00000357250 C3AR1Q16581 482 aa10.17□□□□□ -0.78
COL9A1-202ENST00000357250 OR8I2Q8N0Y5 310 aa10.17□□□□□ -0.78
COL9A1-202ENST00000357250 MAP1LC3CQ9BXW4 147 aa10.17□□□□□ -0.78
COL9A1-202ENST00000357250 HSPB8Q9UJY1 196 aa10.17□□□□□ -0.78
COL9A1-202ENST00000357250 DICER1Q9UPY3 1922 aaKnown RBP10.17□□□□□ -0.78
COL9A1-202ENST00000357250 TRAV20A0A0B4J274 112 aa10.17□□□□□ -0.78
COL9A1-202ENST00000357250 MED19A0JLT2 244 aaPredicted RBP10.17□□□□□ -0.78
COL9A1-202ENST00000357250 F5H697 171 aa10.17□□□□□ -0.78
COL9A1-202ENST00000357250 CD74P04233 296 aa10.17□□□□□ -0.78
COL9A1-202ENST00000357250 SRP14P37108 136 aaKnown RBP10.17□□□□□ -0.78
COL9A1-202ENST00000357250 HERVK_113P61574 105 aa10.17□□□□□ -0.78
COL9A1-202ENST00000357250 ZNF788Q6ZQV5 615 aa10.17□□□□□ -0.78
COL9A1-202ENST00000357250 COA4Q9NYJ1 87 aa10.17□□□□□ -0.78
COL9A1-202ENST00000357250 SLC25A10Q9UBX3 287 aaPredicted RBP10.17□□□□□ -0.78
COL9A1-202ENST00000357250 OR51B2Q9Y5P1 312 aa10.17□□□□□ -0.78
COL9A1-202ENST00000357250 KCNMB2Q9Y691 235 aa10.17□□□□□ -0.78
COL9A1-202ENST00000357250 CHD5Q8TDI0 1954 aa10.17□□□□□ -0.78
COL9A1-202ENST00000357250 MFSD2BA6NFX1 497 aa10.17□□□□□ -0.78
COL9A1-202ENST00000357250 SPINK4O60575 86 aa10.17□□□□□ -0.78
COL9A1-202ENST00000357250 CYB5R3P00387 301 aaPredicted RBP10.17□□□□□ -0.78
COL9A1-202ENST00000357250 AESQ08117 197 aa10.17□□□□□ -0.78
COL9A1-202ENST00000357250 UBE2V2Q15819 145 aa10.17□□□□□ -0.78
COL9A1-202ENST00000357250 C10orf128Q5T292 105 aa10.17□□□□□ -0.78
COL9A1-202ENST00000357250 DPF1Q92782 380 aa10.17□□□□□ -0.78
COL9A1-202ENST00000357250 HBZP02008 142 aa10.16□□□□□ -0.78
COL9A1-202ENST00000357250 RPL29P47914 159 aaKnown RBP10.16□□□□□ -0.78
COL9A1-202ENST00000357250 PAFAH1B2P68402 229 aa10.16□□□□□ -0.78
COL9A1-202ENST00000357250 COL10A1Q03692 680 aa10.16□□□□□ -0.78
COL9A1-202ENST00000357250 ZNF645Q8N7E2 425 aa10.16□□□□□ -0.78
COL9A1-202ENST00000357250 SLC25A33Q9BSK2 321 aa10.16□□□□□ -0.78
COL9A1-202ENST00000357250 ASCL3Q9NQ33 180 aa10.16□□□□□ -0.78
COL9A1-202ENST00000357250 ZDHHC8Q9ULC8 765 aa10.16□□□□□ -0.78
COL9A1-202ENST00000357250 TCAPO15273 167 aa10.16□□□□□ -0.78
COL9A1-202ENST00000357250 MPV17P39210 176 aa10.16□□□□□ -0.78
COL9A1-202ENST00000357250 LINC01590Q5TEZ4 76 aa10.16□□□□□ -0.78
COL9A1-202ENST00000357250 PQLC2Q6ZP29 291 aa10.16□□□□□ -0.78
COL9A1-202ENST00000357250 RFLNBQ8N5W9 214 aa10.16□□□□□ -0.78
COL9A1-202ENST00000357250 TMEM74BQ9NUR3 256 aa10.16□□□□□ -0.78
COL9A1-202ENST00000357250 LHFPL6Q9Y693 200 aa10.16□□□□□ -0.78
COL9A1-202ENST00000357250 ZSWIM8A7E2V4 1837 aa10.16□□□□□ -0.78
COL9A1-202ENST00000357250 ZNF660Q6AZW8 331 aaPredicted RBP10.16□□□□□ -0.78
COL9A1-202ENST00000357250 TMEM116Q8NCL8 245 aa10.16□□□□□ -0.78
COL9A1-202ENST00000357250 ISOC2Q96AB3 205 aa10.16□□□□□ -0.78
COL9A1-202ENST00000357250 KCNE5Q9UJ90 142 aa10.16□□□□□ -0.78
COL9A1-202ENST00000357250 C17orf51A8MQB3 221 aa10.15□□□□□ -0.78
COL9A1-202ENST00000357250 AGFG2O95081 481 aa10.15□□□□□ -0.78
COL9A1-202ENST00000357250 SCGB1C2P0DMR2 95 aa10.15□□□□□ -0.78
COL9A1-202ENST00000357250 PPP1CCP36873 323 aaKnown RBP10.15□□□□□ -0.78
COL9A1-202ENST00000357250 P2RY4P51582 365 aa10.15□□□□□ -0.78
COL9A1-202ENST00000357250 SLC25A45Q8N413 288 aa10.15□□□□□ -0.78
COL9A1-202ENST00000357250 ZNF714Q96N38 554 aa10.15□□□□□ -0.78
COL9A1-202ENST00000357250 HDHD3Q9BSH5 251 aaPredicted RBP10.15□□□□□ -0.78
COL9A1-202ENST00000357250 SFXN3Q9BWM7 321 aa10.15□□□□□ -0.78
COL9A1-202ENST00000357250 MDC1Q14676 2089 aaKnown RBP10.15□□□□□ -0.78
COL9A1-202ENST00000357250 HYPMO75409 117 aa10.15□□□□□ -0.78
COL9A1-202ENST00000357250 WDFY1Q8IWB7 410 aa10.15□□□□□ -0.78
COL9A1-202ENST00000357250 SAP25Q8TEE9 199 aa10.15□□□□□ -0.78
COL9A1-202ENST00000357250 AMELYQ99218 206 aa10.15□□□□□ -0.78
COL9A1-202ENST00000357250 MSL2Q9HCI7 577 aa10.15□□□□□ -0.78
COL9A1-202ENST00000357250 CXorf65A6NEN9 183 aa10.15□□□□□ -0.78
COL9A1-202ENST00000357250 A8MWL6 223 aa10.15□□□□□ -0.78
COL9A1-202ENST00000357250 PIN1P1O15428 100 aa10.15□□□□□ -0.78
COL9A1-202ENST00000357250 CLDN14O95500 239 aa10.15□□□□□ -0.78
COL9A1-202ENST00000357250 CFDP00746 253 aaPredicted RBP10.15□□□□□ -0.78
COL9A1-202ENST00000357250 IGKV3-11P04433 115 aa10.15□□□□□ -0.78
COL9A1-202ENST00000357250 DCAF12L2Q5VW00 463 aa10.15□□□□□ -0.78
COL9A1-202ENST00000357250 LSM10Q969L4 123 aaKnown RBP10.15□□□□□ -0.78
COL9A1-202ENST00000357250 SCNM1Q9BWG6 230 aa10.15□□□□□ -0.78
COL9A1-202ENST00000357250 SRD5A3Q9H8P0 318 aa10.15□□□□□ -0.78
COL9A1-202ENST00000357250 HS3ST3B1Q9Y662 390 aa10.15□□□□□ -0.78
COL9A1-202ENST00000357250 IGKV1D-42A0A075B6H8 117 aa10.15□□□□□ -0.79
COL9A1-202ENST00000357250 TMEM14DPA8MWL7 114 aa10.15□□□□□ -0.79
COL9A1-202ENST00000357250 TMEM229AB2RXF0 380 aa10.15□□□□□ -0.79
COL9A1-202ENST00000357250 KLF4O43474 513 aa10.15□□□□□ -0.79
COL9A1-202ENST00000357250 PRSS1P07477 247 aa10.15□□□□□ -0.79
COL9A1-202ENST00000357250 MMD2Q8IY49 270 aa10.15□□□□□ -0.79
COL9A1-202ENST00000357250 SHISA5Q8N114 240 aa10.15□□□□□ -0.79
COL9A1-202ENST00000357250 SNRNP40Q96DI7 357 aaKnown RBP10.15□□□□□ -0.79
COL9A1-202ENST00000357250 Q96M66 194 aa10.15□□□□□ -0.79
COL9A1-202ENST00000357250 C19orf24Q9BVV8 132 aa10.15□□□□□ -0.79
COL9A1-202ENST00000357250 HIGD1AQ9Y241 93 aa10.15□□□□□ -0.79
COL9A1-202ENST00000357250 CDK2AP1O14519 115 aa10.14□□□□□ -0.79
COL9A1-202ENST00000357250 RPL27AP46776 148 aaKnown RBP10.14□□□□□ -0.79
COL9A1-202ENST00000357250 RPS11P62280 158 aaKnown RBP eCLIP10.14□□□□□ -0.79
COL9A1-202ENST00000357250 NSUN5P2Q63ZY6 315 aa10.14□□□□□ -0.79
COL9A1-202ENST00000357250 OR8G5Q8NG78 346 aa10.14□□□□□ -0.79
COL9A1-202ENST00000357250 PAXXQ9BUH6 204 aa10.14□□□□□ -0.79
COL9A1-202ENST00000357250 LINC00470Q9BZP3 86 aa10.14□□□□□ -0.79
COL9A1-202ENST00000357250 ZNF71Q9NQZ8 489 aaPredicted RBP10.14□□□□□ -0.79
COL9A1-202ENST00000357250 WDR81Q562E7 1941 aa10.14□□□□□ -0.79
COL9A1-202ENST00000357250 A0A0G2JMZ2 1700 aa10.14□□□□□ -0.79
COL9A1-202ENST00000357250 MEX3AA1L020 520 aaKnown RBP10.14□□□□□ -0.79
COL9A1-202ENST00000357250 OR2A4O95047 310 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms