RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 FAM58AQ8N1B3 248 aa13.41□□□□□ -0.26
RTN3-205ENST00000356000 BCORP1Q8N888 145 aa13.41□□□□□ -0.26
RTN3-205ENST00000356000 ST6GALNAC3Q8NDV1 305 aa13.41□□□□□ -0.26
RTN3-205ENST00000356000 PILRBQ9UKJ0 227 aa13.41□□□□□ -0.26
RTN3-205ENST00000356000 CHD9Q3L8U1 2897 aa13.41□□□□□ -0.26
RTN3-205ENST00000356000 TRAV36DV7A0A075B6V5 113 aa13.41□□□□□ -0.26
RTN3-205ENST00000356000 TRBV9A0A0B4J1U6 114 aa13.41□□□□□ -0.26
RTN3-205ENST00000356000 GAGE10A6NGK3 116 aa13.41□□□□□ -0.26
RTN3-205ENST00000356000 KIAA1324LA8MWY0 1029 aaPredicted RBP13.41□□□□□ -0.26
RTN3-205ENST00000356000 TMEM25Q86YD3 366 aa13.41□□□□□ -0.26
RTN3-205ENST00000356000 SLC25A40Q8TBP6 338 aa13.41□□□□□ -0.26
RTN3-205ENST00000356000 SFXN3Q9BWM7 321 aa13.41□□□□□ -0.26
RTN3-205ENST00000356000 MOB1AQ9H8S9 216 aa13.41□□□□□ -0.26
RTN3-205ENST00000356000 IL21Q9HBE4 155 aa13.41□□□□□ -0.26
RTN3-205ENST00000356000 GPR27Q9NS67 375 aa13.41□□□□□ -0.26
RTN3-205ENST00000356000 COL6A3P12111 3177 aa13.4□□□□□ -0.26
RTN3-205ENST00000356000 TTC28Q96AY4 2481 aa13.4□□□□□ -0.26
RTN3-205ENST00000356000 TRAV26-1A0A087WT03 109 aa13.4□□□□□ -0.26
RTN3-205ENST00000356000 HMGB3O15347 200 aaKnown RBP13.4□□□□□ -0.26
RTN3-205ENST00000356000 ZNF10P21506 573 aaPredicted RBP13.4□□□□□ -0.26
RTN3-205ENST00000356000 S100GP29377 79 aa13.4□□□□□ -0.26
RTN3-205ENST00000356000 RAB9AP51151 201 aa13.4□□□□□ -0.26
RTN3-205ENST00000356000 ARL16Q0P5N6 197 aa13.4□□□□□ -0.26
RTN3-205ENST00000356000 TCF15Q12870 199 aa13.4□□□□□ -0.26
RTN3-205ENST00000356000 EIF3IQ13347 325 aaKnown RBP13.4□□□□□ -0.26
RTN3-205ENST00000356000 NNATQ16517 81 aa13.4□□□□□ -0.26
RTN3-205ENST00000356000 RNFT1Q5M7Z0 435 aa13.4□□□□□ -0.26
RTN3-205ENST00000356000 ZNF114Q8NC26 417 aa13.4□□□□□ -0.26
RTN3-205ENST00000356000 FAM222BQ8WU58 562 aa13.4□□□□□ -0.26
RTN3-205ENST00000356000 FGF14Q92915 247 aa13.4□□□□□ -0.26
RTN3-205ENST00000356000 RAB40CQ96S21 281 aa13.4□□□□□ -0.26
RTN3-205ENST00000356000 HEBP2Q9Y5Z4 205 aa13.4□□□□□ -0.26
RTN3-205ENST00000356000 SPACA6W5XKT8 324 aa13.4□□□□□ -0.26
RTN3-205ENST00000356000 OBSL1O75147 1896 aa13.4□□□□□ -0.26
RTN3-205ENST00000356000 SNURFLB1AK76 121 aa13.4□□□□□ -0.26
RTN3-205ENST00000356000 HCRTR1O43613 425 aa13.4□□□□□ -0.26
RTN3-205ENST00000356000 DXOO77932 396 aaKnown RBP13.4□□□□□ -0.26
RTN3-205ENST00000356000 TNFP01375 233 aa13.4□□□□□ -0.26
RTN3-205ENST00000356000 CELA3BP08861 270 aa13.4□□□□□ -0.26
RTN3-205ENST00000356000 SLC35E2P0CK97 266 aa13.4□□□□□ -0.26
RTN3-205ENST00000356000 HERV-K104P61576 105 aa13.4□□□□□ -0.26
RTN3-205ENST00000356000 GNB1P62873 340 aa13.4□□□□□ -0.26
RTN3-205ENST00000356000 RNPS1Q15287 305 aaKnown RBP13.4□□□□□ -0.26
RTN3-205ENST00000356000 PRTGQ2VWP7 1150 aa13.4□□□□□ -0.26
RTN3-205ENST00000356000 PHYHD1Q5SRE7 291 aa13.4□□□□□ -0.26
RTN3-205ENST00000356000 Q96M66 194 aa13.4□□□□□ -0.26
RTN3-205ENST00000356000 LRRC61Q9BV99 259 aa13.4□□□□□ -0.26
RTN3-205ENST00000356000 IL36BQ9NZH7 164 aa13.4□□□□□ -0.26
RTN3-205ENST00000356000 PILRAQ9UKJ1 303 aa13.4□□□□□ -0.26
RTN3-205ENST00000356000 C11orf94C9JXX5 98 aa13.39□□□□□ -0.27
RTN3-205ENST00000356000 DEGS1O15121 323 aa13.39□□□□□ -0.27
RTN3-205ENST00000356000 MT-ATP6P00846 226 aa13.39□□□□□ -0.27
RTN3-205ENST00000356000 IER3P46695 156 aa13.39□□□□□ -0.27
RTN3-205ENST00000356000 TBC1D26Q86UD7 250 aa13.39□□□□□ -0.27
RTN3-205ENST00000356000 GNB1LQ9BYB4 327 aa13.39□□□□□ -0.27
RTN3-205ENST00000356000 SLC25A22Q9H936 323 aa13.39□□□□□ -0.27
RTN3-205ENST00000356000 LHFPL6Q9Y693 200 aa13.39□□□□□ -0.27
RTN3-205ENST00000356000 MYO9BQ13459 2157 aa13.39□□□□□ -0.27
RTN3-205ENST00000356000 CGAP01215 116 aa13.39□□□□□ -0.27
RTN3-205ENST00000356000 LGALS4P56470 323 aa13.39□□□□□ -0.27
RTN3-205ENST00000356000 OR1D5P58170 312 aa13.39□□□□□ -0.27
RTN3-205ENST00000356000 ZNF324BQ6AW86 544 aaPredicted RBP13.39□□□□□ -0.27
RTN3-205ENST00000356000 ADAMTSL4Q6UY14 1074 aa13.39□□□□□ -0.27
RTN3-205ENST00000356000 OR10G8Q8NGN5 311 aa13.39□□□□□ -0.27
RTN3-205ENST00000356000 NAT6Q93015 286 aa13.39□□□□□ -0.27
RTN3-205ENST00000356000 TIMM9Q9Y5J7 89 aa13.39□□□□□ -0.27
RTN3-205ENST00000356000 HAND1O96004 215 aa13.38□□□□□ -0.27
RTN3-205ENST00000356000 SMIM17P0DL12 118 aa13.38□□□□□ -0.27
RTN3-205ENST00000356000 TIMP3P35625 211 aa13.38□□□□□ -0.27
RTN3-205ENST00000356000 FUT6P51993 359 aa13.38□□□□□ -0.27
RTN3-205ENST00000356000 SELENOVP59797 346 aa13.38□□□□□ -0.27
RTN3-205ENST00000356000 PDGFRLQ15198 375 aa13.38□□□□□ -0.27
RTN3-205ENST00000356000 PRSS41Q7RTY9 318 aa13.38□□□□□ -0.27
RTN3-205ENST00000356000 HRKO00198 91 aa13.38□□□□□ -0.27
RTN3-205ENST00000356000 PDE6DO43924 150 aa13.38□□□□□ -0.27
RTN3-205ENST00000356000 CCL1P22362 96 aa13.38□□□□□ -0.27
RTN3-205ENST00000356000 CEACAM3P40198 252 aa13.38□□□□□ -0.27
RTN3-205ENST00000356000 DMRTC1Q5HYR2 192 aa13.38□□□□□ -0.27
RTN3-205ENST00000356000 WDR82Q6UXN9 313 aa13.38□□□□□ -0.27
RTN3-205ENST00000356000 GTF2H5Q6ZYL4 71 aa13.38□□□□□ -0.27
RTN3-205ENST00000356000 OR8B12Q8NGG6 310 aa13.38□□□□□ -0.27
RTN3-205ENST00000356000 TAF15Q92804 592 aaKnown RBP eCLIP13.38□□□□□ -0.27
RTN3-205ENST00000356000 OR2A5Q96R48 311 aa13.38□□□□□ -0.27
RTN3-205ENST00000356000 SIGMAR1Q99720 223 aa13.38□□□□□ -0.27
RTN3-205ENST00000356000 SHANK1Q9Y566 2161 aa13.37□□□□□ -0.27
RTN3-205ENST00000356000 ATG2BQ96BY7 2078 aa13.37□□□□□ -0.27
RTN3-205ENST00000356000 TRANK1O15050 2925 aa13.37□□□□□ -0.27
RTN3-205ENST00000356000 LINC00869P0C866 280 aa13.37□□□□□ -0.27
RTN3-205ENST00000356000 CTSSP25774 331 aa13.37□□□□□ -0.27
RTN3-205ENST00000356000 OR10V1Q8NGI7 309 aa13.37□□□□□ -0.27
RTN3-205ENST00000356000 TSKUQ8WUA8 353 aa13.37□□□□□ -0.27
RTN3-205ENST00000356000 IGKV1D-43A0A0B4J1Z2 117 aa13.37□□□□□ -0.27
RTN3-205ENST00000356000 PGPEP1LA6NFU8 196 aa13.37□□□□□ -0.27
RTN3-205ENST00000356000 GFRA3O60609 400 aa13.37□□□□□ -0.27
RTN3-205ENST00000356000 NAPSAO96009 420 aa13.37□□□□□ -0.27
RTN3-205ENST00000356000 PPYP01298 95 aa13.37□□□□□ -0.27
RTN3-205ENST00000356000 EGR1P18146 543 aa13.37□□□□□ -0.27
RTN3-205ENST00000356000 FOXL2P58012 376 aa13.37□□□□□ -0.27
RTN3-205ENST00000356000 ACSM6Q6P461 480 aa13.37□□□□□ -0.27
RTN3-205ENST00000356000 FAM19A2Q8N3H0 131 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms