RNA–Protein interactions for RNA: ENST00000355633.5

HOXA1-202, Transcript of homeobox A1, humanhuman

TSL 1 (best) BASIC

Gene HOXA1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-202ENST00000355633 OR2T35Q8NGX2 323 aa11.21□□□□□ -0.62
HOXA1-202ENST00000355633 ASB13Q8WXK3 278 aa11.21□□□□□ -0.62
HOXA1-202ENST00000355633 RAB39BQ96DA2 213 aa11.21□□□□□ -0.62
HOXA1-202ENST00000355633 MSI2Q96DH6 328 aaKnown RBP11.21□□□□□ -0.62
HOXA1-202ENST00000355633 WDR89Q96FK6 387 aaPredicted RBP11.21□□□□□ -0.62
HOXA1-202ENST00000355633 ABHD14AQ9BUJ0 271 aa11.21□□□□□ -0.62
HOXA1-202ENST00000355633 TMEM222Q9H0R3 208 aa11.21□□□□□ -0.62
HOXA1-202ENST00000355633 ANKRD34BA5PLL1 514 aa11.2□□□□□ -0.62
HOXA1-202ENST00000355633 C5orf51A6NDU8 294 aa11.2□□□□□ -0.62
HOXA1-202ENST00000355633 SLC31A2O15432 143 aa11.2□□□□□ -0.62
HOXA1-202ENST00000355633 B3GALNT1O75752 331 aa11.2□□□□□ -0.62
HOXA1-202ENST00000355633 HOXB5P09067 269 aa11.2□□□□□ -0.62
HOXA1-202ENST00000355633 GPR12P47775 334 aa11.2□□□□□ -0.62
HOXA1-202ENST00000355633 ZNF134P52741 427 aa11.2□□□□□ -0.62
HOXA1-202ENST00000355633 NKX2-5P52952 324 aaPredicted RBP11.2□□□□□ -0.62
HOXA1-202ENST00000355633 DLX6P56179 175 aa11.2□□□□□ -0.62
HOXA1-202ENST00000355633 SRPXP78539 464 aa11.2□□□□□ -0.62
HOXA1-202ENST00000355633 UTF1Q5T230 341 aa11.2□□□□□ -0.62
HOXA1-202ENST00000355633 GSG1LQ6UXU4 331 aa11.2□□□□□ -0.62
HOXA1-202ENST00000355633 NOXA1Q86UR1 476 aa11.2□□□□□ -0.62
HOXA1-202ENST00000355633 LRTM2Q8N967 370 aa11.2□□□□□ -0.62
HOXA1-202ENST00000355633 C8orf46Q8TAG6 207 aa11.2□□□□□ -0.62
HOXA1-202ENST00000355633 SSBP3Q9BWW4 388 aaPredicted RBP11.2□□□□□ -0.62
HOXA1-202ENST00000355633 BPESC1Q9GZL8 116 aa11.2□□□□□ -0.62
HOXA1-202ENST00000355633 BARX1Q9HBU1 254 aaPredicted RBP11.2□□□□□ -0.62
HOXA1-202ENST00000355633 SDHAF2Q9NX18 166 aa11.2□□□□□ -0.62
HOXA1-202ENST00000355633 PPIAL4CA0A0B4J2A2 164 aa11.19□□□□□ -0.62
HOXA1-202ENST00000355633 C13orf42A0A1B0GVH6 325 aa11.19□□□□□ -0.62
HOXA1-202ENST00000355633 A0A1W2PPH5 198 aa11.19□□□□□ -0.62
HOXA1-202ENST00000355633 RNF212BA8MTL3 300 aa11.19□□□□□ -0.62
HOXA1-202ENST00000355633 PPIAL4GP0DN37 164 aa11.19□□□□□ -0.62
HOXA1-202ENST00000355633 ZNF16P17020 682 aaPredicted RBP11.19□□□□□ -0.62
HOXA1-202ENST00000355633 UCP1P25874 307 aa11.19□□□□□ -0.62
HOXA1-202ENST00000355633 ATP5J2P56134 94 aa11.19□□□□□ -0.62
HOXA1-202ENST00000355633 Q3ZCU0 254 aa11.19□□□□□ -0.62
HOXA1-202ENST00000355633 ESCO2Q56NI9 601 aa11.19□□□□□ -0.62
HOXA1-202ENST00000355633 CT45A1Q5HYN5 189 aa11.19□□□□□ -0.62
HOXA1-202ENST00000355633 ZNF439Q8NDP4 499 aa11.19□□□□□ -0.62
HOXA1-202ENST00000355633 CT45A3Q8NHU0 189 aa11.19□□□□□ -0.62
HOXA1-202ENST00000355633 LHFPL5Q8TAF8 219 aa11.19□□□□□ -0.62
HOXA1-202ENST00000355633 NRGNQ92686 78 aa11.19□□□□□ -0.62
HOXA1-202ENST00000355633 C5orf30Q96GV9 206 aa11.19□□□□□ -0.62
HOXA1-202ENST00000355633 SEC22AQ96IW7 307 aa11.19□□□□□ -0.62
HOXA1-202ENST00000355633 IFI27L2Q9H2X8 130 aa11.19□□□□□ -0.62
HOXA1-202ENST00000355633 RANBP3Q9H6Z4 567 aaPredicted RBP11.19□□□□□ -0.62
HOXA1-202ENST00000355633 LIN7CQ9NUP9 197 aaKnown RBP11.19□□□□□ -0.62
HOXA1-202ENST00000355633 DCHS2Q6V1P9 2916 aa11.19□□□□□ -0.62
HOXA1-202ENST00000355633 A0A1W2PPE3 182 aa11.19□□□□□ -0.62
HOXA1-202ENST00000355633 IFNA21P01568 189 aa11.19□□□□□ -0.62
HOXA1-202ENST00000355633 DNASE1P24855 282 aa11.19□□□□□ -0.62
HOXA1-202ENST00000355633 GNG10P50151 68 aa11.19□□□□□ -0.62
HOXA1-202ENST00000355633 SRSF4Q08170 494 aaKnown RBP11.19□□□□□ -0.62
HOXA1-202ENST00000355633 ZNF787Q6DD87 383 aa11.19□□□□□ -0.62
HOXA1-202ENST00000355633 ZNF695Q8IW36 515 aa11.19□□□□□ -0.62
HOXA1-202ENST00000355633 AKAP6Q13023 2319 aa11.19□□□□□ -0.62
HOXA1-202ENST00000355633 C17orf98A8MV24 154 aa11.18□□□□□ -0.62
HOXA1-202ENST00000355633 GZMKP49863 264 aa11.18□□□□□ -0.62
HOXA1-202ENST00000355633 CATR1Q13166 79 aa11.18□□□□□ -0.62
HOXA1-202ENST00000355633 EIF4EBP1Q13541 118 aaPredicted RBP11.18□□□□□ -0.62
HOXA1-202ENST00000355633 TMEM268Q5VZI3 342 aa11.18□□□□□ -0.62
HOXA1-202ENST00000355633 GGNBP1Q5YKI7 109 aa11.18□□□□□ -0.62
HOXA1-202ENST00000355633 BTNL3Q6UXE8 466 aa11.18□□□□□ -0.62
HOXA1-202ENST00000355633 C18orf12Q96KH6 178 aa11.18□□□□□ -0.62
HOXA1-202ENST00000355633 TMEM56Q96MV1 263 aa11.18□□□□□ -0.62
HOXA1-202ENST00000355633 TMEM56-RWDD3S4R434 201 aa11.18□□□□□ -0.62
HOXA1-202ENST00000355633 MALRD1Q5VYJ5 2156 aa11.18□□□□□ -0.62
HOXA1-202ENST00000355633 MPTX1A8MV57 137 aa11.18□□□□□ -0.62
HOXA1-202ENST00000355633 C22orf46C9J442 243 aa11.18□□□□□ -0.62
HOXA1-202ENST00000355633 G3V3Q6 166 aa11.18□□□□□ -0.62
HOXA1-202ENST00000355633 CDS2O95674 445 aa11.18□□□□□ -0.62
HOXA1-202ENST00000355633 IGHV2-5P01817 119 aa11.18□□□□□ -0.62
HOXA1-202ENST00000355633 SERPINE2P07093 398 aa11.18□□□□□ -0.62
HOXA1-202ENST00000355633 LIPFP07098 398 aa11.18□□□□□ -0.62
HOXA1-202ENST00000355633 IGHV1-8P0DP01 117 aa11.18□□□□□ -0.62
HOXA1-202ENST00000355633 Q5BKY6 102 aa11.18□□□□□ -0.62
HOXA1-202ENST00000355633 ZNF66Q6ZN08 573 aa11.18□□□□□ -0.62
HOXA1-202ENST00000355633 SLC25A48Q6ZT89 311 aaKnown RBP11.18□□□□□ -0.62
HOXA1-202ENST00000355633 LYZL2Q7Z4W2 148 aa11.18□□□□□ -0.62
HOXA1-202ENST00000355633 SLC35G3Q8N808 338 aa11.18□□□□□ -0.62
HOXA1-202ENST00000355633 LY6G5BQ8NDX9 201 aa11.18□□□□□ -0.62
HOXA1-202ENST00000355633 FAM168AQ92567 244 aa11.18□□□□□ -0.62
HOXA1-202ENST00000355633 HYLS1Q96M11 299 aa11.18□□□□□ -0.62
HOXA1-202ENST00000355633 PIMREGQ9BSJ6 248 aa11.18□□□□□ -0.62
HOXA1-202ENST00000355633 GAB2Q9UQC2 676 aa11.18□□□□□ -0.62
HOXA1-202ENST00000355633 LOC105371242A0A075B767 164 aa11.17□□□□□ -0.62
HOXA1-202ENST00000355633 RAB29O14966 203 aa11.17□□□□□ -0.62
HOXA1-202ENST00000355633 SSTR2P30874 369 aa11.17□□□□□ -0.62
HOXA1-202ENST00000355633 RPL30P62888 115 aaKnown RBP11.17□□□□□ -0.62
HOXA1-202ENST00000355633 CLEC2AQ6UVW9 174 aa11.17□□□□□ -0.62
HOXA1-202ENST00000355633 SELENOHQ8IZQ5 122 aaKnown RBP11.17□□□□□ -0.62
HOXA1-202ENST00000355633 LYG1Q8N1E2 194 aa11.17□□□□□ -0.62
HOXA1-202ENST00000355633 C11orf42Q8N5U0 333 aa11.17□□□□□ -0.62
HOXA1-202ENST00000355633 CLDND2Q8NHS1 167 aa11.17□□□□□ -0.62
HOXA1-202ENST00000355633 RBPMSQ93062 196 aaKnown RBP11.17□□□□□ -0.62
HOXA1-202ENST00000355633 PERPQ96FX8 193 aa11.17□□□□□ -0.62
HOXA1-202ENST00000355633 OR10C1Q96KK4 312 aa11.17□□□□□ -0.62
HOXA1-202ENST00000355633 HSD17B10Q99714 261 aaKnown RBP11.17□□□□□ -0.62
HOXA1-202ENST00000355633 NDUFS8O00217 210 aa11.16□□□□□ -0.62
HOXA1-202ENST00000355633 PROP1O75360 226 aa11.16□□□□□ -0.62
HOXA1-202ENST00000355633 CYCSP99999 105 aaKnown RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms