RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 hADV38S2A0JD32 116 aa14.23□□□□□ -0.13
VPS13B-201ENST00000355155 RBFOX2O43251 390 aaKnown RBP eCLIP14.23□□□□□ -0.133e-6■■■■□ 25.5
VPS13B-201ENST00000355155 SLC7A5P1Q8MH63 180 aa14.23□□□□□ -0.13
VPS13B-201ENST00000355155 ARV1Q9H2C2 271 aa14.23□□□□□ -0.13
VPS13B-201ENST00000355155 SLC25A32Q9H2D1 315 aa14.23□□□□□ -0.13
VPS13B-201ENST00000355155 TLN1Q9Y490 2541 aaKnown RBP14.23□□□□□ -0.13
VPS13B-201ENST00000355155 A0A1B0GW55 424 aa14.23□□□□□ -0.13
VPS13B-201ENST00000355155 FAM90A26D6RGX4 464 aa14.23□□□□□ -0.13
VPS13B-201ENST00000355155 GPR137BO60478 399 aa14.23□□□□□ -0.13
VPS13B-201ENST00000355155 SERPINE2P07093 398 aa14.23□□□□□ -0.13
VPS13B-201ENST00000355155 DUX4L2P0CJ85 424 aa14.23□□□□□ -0.13
VPS13B-201ENST00000355155 DUX4L3P0CJ86 424 aa14.23□□□□□ -0.13
VPS13B-201ENST00000355155 DUX4L4P0CJ87 422 aa14.23□□□□□ -0.13
VPS13B-201ENST00000355155 DUX4L5P0CJ88 424 aa14.23□□□□□ -0.13
VPS13B-201ENST00000355155 DUX4L6P0CJ89 424 aa14.23□□□□□ -0.13
VPS13B-201ENST00000355155 DUX4L7P0CJ90 424 aa14.23□□□□□ -0.13
VPS13B-201ENST00000355155 BRWD1-AS2P59051 145 aa14.23□□□□□ -0.13
VPS13B-201ENST00000355155 AARDQ4LEZ3 155 aa14.23□□□□□ -0.13
VPS13B-201ENST00000355155 DUX4L9Q6RFH8 374 aaPredicted RBP14.23□□□□□ -0.13
VPS13B-201ENST00000355155 FAM216BQ8N7L0 139 aa14.23□□□□□ -0.13
VPS13B-201ENST00000355155 GPR146Q96CH1 333 aa14.23□□□□□ -0.13
VPS13B-201ENST00000355155 IFI27L2Q9H2X8 130 aa14.23□□□□□ -0.13
VPS13B-201ENST00000355155 DUX4Q9UBX2 424 aa14.23□□□□□ -0.13
VPS13B-201ENST00000355155 LAMP3Q9UQV4 416 aa14.23□□□□□ -0.13
VPS13B-201ENST00000355155 CADP27708 2225 aa14.22□□□□□ -0.13
VPS13B-201ENST00000355155 FAM90A9PA6NNJ1 464 aa14.22□□□□□ -0.13
VPS13B-201ENST00000355155 ADAM20O43506 726 aa14.22□□□□□ -0.13
VPS13B-201ENST00000355155 TNFSF12O43508 249 aa14.22□□□□□ -0.13
VPS13B-201ENST00000355155 IGKV1-5P01602 117 aa14.22□□□□□ -0.13
VPS13B-201ENST00000355155 SELLP14151 372 aa14.22□□□□□ -0.13
VPS13B-201ENST00000355155 CD300LFQ8TDQ1 290 aa14.22□□□□□ -0.13
VPS13B-201ENST00000355155 ATG12O94817 140 aa14.22□□□□□ -0.13
VPS13B-201ENST00000355155 KCNS2Q9ULS6 477 aa14.22□□□□□ -0.13
VPS13B-201ENST00000355155 SPTBN4Q9H254 2564 aa14.22□□□□□ -0.13
VPS13B-201ENST00000355155 DSPP15924 2871 aaKnown RBP14.21□□□□□ -0.13
VPS13B-201ENST00000355155 GNLYP22749 145 aa14.21□□□□□ -0.13
VPS13B-201ENST00000355155 RPL12P30050 165 aaKnown RBP14.21□□□□□ -0.13
VPS13B-201ENST00000355155 KIR2DS2P43631 304 aa14.21□□□□□ -0.13
VPS13B-201ENST00000355155 RPL30P62888 115 aaKnown RBP14.21□□□□□ -0.13
VPS13B-201ENST00000355155 ZCCHC24Q8N2G6 241 aaKnown RBP14.21□□□□□ -0.13
VPS13B-201ENST00000355155 UBALD1Q8TB05 177 aa14.21□□□□□ -0.13
VPS13B-201ENST00000355155 SLC25A10Q9UBX3 287 aaPredicted RBP14.21□□□□□ -0.13
VPS13B-201ENST00000355155 RPUSD1Q9UJJ7 312 aaKnown RBP14.21□□□□□ -0.13
VPS13B-201ENST00000355155 MMP24Q9Y5R2 645 aa14.21□□□□□ -0.13
VPS13B-201ENST00000355155 PROP1O75360 226 aa14.21□□□□□ -0.14
VPS13B-201ENST00000355155 IGHV2-70P01814 119 aa14.21□□□□□ -0.14
VPS13B-201ENST00000355155 DANCRP0C864 163 aa14.21□□□□□ -0.14
VPS13B-201ENST00000355155 NKX2-1P43699 371 aaPredicted RBP14.21□□□□□ -0.14
VPS13B-201ENST00000355155 S100A10P60903 97 aa14.21□□□□□ -0.14
VPS13B-201ENST00000355155 NEU4Q8WWR8 484 aaPredicted RBP14.21□□□□□ -0.14
VPS13B-201ENST00000355155 DDB2Q92466 427 aa14.21□□□□□ -0.14
VPS13B-201ENST00000355155 RBM7Q9Y580 266 aaKnown RBP14.21□□□□□ -0.14
VPS13B-201ENST00000355155 A0A087X0M5 115 aa14.2□□□□□ -0.14
VPS13B-201ENST00000355155 A0A0G2JRQ6 117 aa14.2□□□□□ -0.14
VPS13B-201ENST00000355155 A0A1B0GX30 115 aa14.2□□□□□ -0.14
VPS13B-201ENST00000355155 GPR37O15354 613 aa14.2□□□□□ -0.14
VPS13B-201ENST00000355155 DUTP33316 252 aaKnown RBP14.2□□□□□ -0.14
VPS13B-201ENST00000355155 DLX6P56179 175 aa14.2□□□□□ -0.14
VPS13B-201ENST00000355155 EDDM3BP56851 147 aa14.2□□□□□ -0.14
VPS13B-201ENST00000355155 OR51H1Q8NH63 302 aa14.2□□□□□ -0.14
VPS13B-201ENST00000355155 ZG16O60844 167 aa14.2□□□□□ -0.14
VPS13B-201ENST00000355155 TPT1P13693 172 aaKnown RBP14.2□□□□□ -0.14
VPS13B-201ENST00000355155 EIF5AP63241 154 aaKnown RBP14.2□□□□□ -0.14
VPS13B-201ENST00000355155 THOC7Q6I9Y2 204 aaKnown RBP14.2□□□□□ -0.14
VPS13B-201ENST00000355155 FAM53AQ6NSI3 398 aaPredicted RBP14.2□□□□□ -0.14
VPS13B-201ENST00000355155 GPHA2Q96T91 129 aa14.2□□□□□ -0.14
VPS13B-201ENST00000355155 GAL3ST2Q9H3Q3 398 aa14.2□□□□□ -0.14
VPS13B-201ENST00000355155 TRBV23-1A0A0A0MS06 115 aa14.19□□□□□ -0.14
VPS13B-201ENST00000355155 NMBP08949 121 aa14.19□□□□□ -0.14
VPS13B-201ENST00000355155 TAS2R30P59541 319 aa14.19□□□□□ -0.14
VPS13B-201ENST00000355155 SNTB1Q13884 538 aaKnown RBP14.19□□□□□ -0.14
VPS13B-201ENST00000355155 ODF3L1Q8IXM7 274 aa14.19□□□□□ -0.14
VPS13B-201ENST00000355155 LINC00311Q8N616 119 aa14.19□□□□□ -0.14
VPS13B-201ENST00000355155 LRRC20Q8TCA0 184 aa14.19□□□□□ -0.14
VPS13B-201ENST00000355155 ARFGEF3Q5TH69 2177 aa14.19□□□□□ -0.14
VPS13B-201ENST00000355155 RAB29O14966 203 aa14.19□□□□□ -0.14
VPS13B-201ENST00000355155 ZNF134P52741 427 aa14.19□□□□□ -0.14
VPS13B-201ENST00000355155 HFEQ30201 348 aa14.19□□□□□ -0.14
VPS13B-201ENST00000355155 MIDNQ504T8 468 aa14.19□□□□□ -0.14
VPS13B-201ENST00000355155 FAM71F2Q6NXP2 309 aa14.19□□□□□ -0.14
VPS13B-201ENST00000355155 HEPN1Q6WQI6 88 aa14.19□□□□□ -0.14
VPS13B-201ENST00000355155 SLC25A48Q6ZT89 311 aaKnown RBP14.19□□□□□ -0.14
VPS13B-201ENST00000355155 OR8H3Q8N146 312 aa14.19□□□□□ -0.14
VPS13B-201ENST00000355155 RFESDQ8TAC1 157 aa14.19□□□□□ -0.14
VPS13B-201ENST00000355155 MARVELD3Q96A59 401 aa14.19□□□□□ -0.14
VPS13B-201ENST00000355155 ZNF251Q9BRH9 671 aa14.19□□□□□ -0.14
VPS13B-201ENST00000355155 CTSZQ9UBR2 303 aa14.19□□□□□ -0.14
VPS13B-201ENST00000355155 LSM5Q9Y4Y9 91 aaKnown RBP14.19□□□□□ -0.14
VPS13B-201ENST00000355155 LRRC10Q5BKY1 277 aa14.19□□□□□ -0.14
VPS13B-201ENST00000355155 DEFB108BQ8NET1 73 aa14.19□□□□□ -0.14
VPS13B-201ENST00000355155 C8orf46Q8TAG6 207 aa14.19□□□□□ -0.14
VPS13B-201ENST00000355155 ABHD14AQ9BUJ0 271 aa14.19□□□□□ -0.14
VPS13B-201ENST00000355155 LYRM2Q9NU23 88 aaPredicted RBP14.19□□□□□ -0.14
VPS13B-201ENST00000355155 PSG11Q9UQ72 335 aa14.19□□□□□ -0.14
VPS13B-201ENST00000355155 PIEZO2Q9H5I5 2752 aa14.18□□□□□ -0.14
VPS13B-201ENST00000355155 FGF16O43320 207 aa14.18□□□□□ -0.14
VPS13B-201ENST00000355155 CLDN1O95832 211 aa14.18□□□□□ -0.14
VPS13B-201ENST00000355155 DAOP14920 347 aa14.18□□□□□ -0.14
VPS13B-201ENST00000355155 LPAR6P43657 344 aa14.18□□□□□ -0.14
VPS13B-201ENST00000355155 UQCRFS1P47985 274 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms