RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 MSL2Q9HCI7 577 aa18.67■□□□□ 0.58
NKX2-1-201ENST00000354822 UFSP2Q9NUQ7 469 aa18.67■□□□□ 0.58
NKX2-1-201ENST00000354822 CACNA1GO43497 2377 aa18.67■□□□□ 0.58
NKX2-1-201ENST00000354822 PTBP3O95758 552 aaKnown RBP18.66■□□□□ 0.58
NKX2-1-201ENST00000354822 HSPB1P04792 205 aaKnown RBP18.66■□□□□ 0.58
NKX2-1-201ENST00000354822 METTL15P1P0C7V9 234 aa18.66■□□□□ 0.58
NKX2-1-201ENST00000354822 COL10A1Q03692 680 aa18.66■□□□□ 0.58
NKX2-1-201ENST00000354822 EIF4EBP1Q13541 118 aaPredicted RBP18.66■□□□□ 0.58
NKX2-1-201ENST00000354822 HOXA1P49639 335 aaPredicted RBP18.66■□□□□ 0.58
NKX2-1-201ENST00000354822 RAB5BP61020 215 aa18.66■□□□□ 0.58
NKX2-1-201ENST00000354822 SERF2P84101 59 aa18.66■□□□□ 0.58
NKX2-1-201ENST00000354822 ZNF506Q5JVG8 444 aa18.66■□□□□ 0.58
NKX2-1-201ENST00000354822 IGFL3Q6UXB1 125 aa18.66■□□□□ 0.58
NKX2-1-201ENST00000354822 ZNF525Q8N782 197 aa18.66■□□□□ 0.58
NKX2-1-201ENST00000354822 FZR1Q9UM11 496 aa18.66■□□□□ 0.58
NKX2-1-201ENST00000354822 LAMP3Q9UQV4 416 aa18.66■□□□□ 0.58
NKX2-1-201ENST00000354822 SLC25A15Q9Y619 301 aa18.66■□□□□ 0.58
NKX2-1-201ENST00000354822 AKR1C3P42330 323 aa18.65■□□□□ 0.58
NKX2-1-201ENST00000354822 LRRC75BQ2VPJ9 315 aa18.65■□□□□ 0.58
NKX2-1-201ENST00000354822 MRGPRDQ8TDS7 321 aa18.65■□□□□ 0.58
NKX2-1-201ENST00000354822 HIST1H2BAQ96A08 127 aa18.65■□□□□ 0.58
NKX2-1-201ENST00000354822 SEBOXQ9HB31 216 aaPredicted RBP18.65■□□□□ 0.58
NKX2-1-201ENST00000354822 TNFRSF9Q07011 255 aa18.65■□□□□ 0.58
NKX2-1-201ENST00000354822 KHDC3LQ587J8 217 aa18.65■□□□□ 0.58
NKX2-1-201ENST00000354822 ZNF66Q6ZN08 573 aa18.65■□□□□ 0.58
NKX2-1-201ENST00000354822 CTNNBIP1Q9NSA3 81 aaPredicted RBP18.65■□□□□ 0.58
NKX2-1-201ENST00000354822 HSPB7Q9UBY9 170 aa18.65■□□□□ 0.58
NKX2-1-201ENST00000354822 SRP19P09132 144 aaKnown RBP18.64■□□□□ 0.57
NKX2-1-201ENST00000354822 EIF2S3LQ2VIR3 472 aaKnown RBP18.64■□□□□ 0.57
NKX2-1-201ENST00000354822 SPANXN5Q5MJ07 72 aa18.64■□□□□ 0.57
NKX2-1-201ENST00000354822 FAM90A1Q86YD7 464 aa18.64■□□□□ 0.57
NKX2-1-201ENST00000354822 LILRB2Q8N423 598 aa18.64■□□□□ 0.57
NKX2-1-201ENST00000354822 CLDND2Q8NHS1 167 aa18.64■□□□□ 0.57
NKX2-1-201ENST00000354822 C20orf24Q9BUV8 137 aa18.64■□□□□ 0.57
NKX2-1-201ENST00000354822 KIAA2026Q5HYC2 2103 aa18.64■□□□□ 0.57
NKX2-1-201ENST00000354822 SPINT2O43291 252 aa18.64■□□□□ 0.57
NKX2-1-201ENST00000354822 PPIHO43447 177 aaKnown RBP18.64■□□□□ 0.57
NKX2-1-201ENST00000354822 SCAF4O95104 1147 aaKnown RBP18.64■□□□□ 0.57
NKX2-1-201ENST00000354822 ADH4P08319 380 aa18.64■□□□□ 0.57
NKX2-1-201ENST00000354822 P0C879 139 aa18.64■□□□□ 0.57
NKX2-1-201ENST00000354822 PTAFRP25105 342 aa18.64■□□□□ 0.57
NKX2-1-201ENST00000354822 HTD2P86397 168 aa18.64■□□□□ 0.57
NKX2-1-201ENST00000354822 ARL16Q0P5N6 197 aa18.64■□□□□ 0.57
NKX2-1-201ENST00000354822 HAGHQ16775 308 aa18.64■□□□□ 0.57
NKX2-1-201ENST00000354822 LINC00518Q8N0U6 118 aa18.64■□□□□ 0.57
NKX2-1-201ENST00000354822 LRRC29Q8WV35 223 aa18.64■□□□□ 0.57
NKX2-1-201ENST00000354822 C1orf196B1AJZ1 125 aa18.63■□□□□ 0.57
NKX2-1-201ENST00000354822 RAMP3O60896 148 aa18.63■□□□□ 0.57
NKX2-1-201ENST00000354822 PRDX2P32119 198 aa18.63■□□□□ 0.57
NKX2-1-201ENST00000354822 GLIPR1P48060 266 aa18.63■□□□□ 0.57
NKX2-1-201ENST00000354822 SEM1Q6ZVN7 128 aa18.63■□□□□ 0.57
NKX2-1-201ENST00000354822 FAM216AQ8WUB2 273 aa18.63■□□□□ 0.57
NKX2-1-201ENST00000354822 PINX1Q96BK5 328 aaKnown RBP18.63■□□□□ 0.57
NKX2-1-201ENST00000354822 WASF3Q9UPY6 502 aa18.63■□□□□ 0.57
NKX2-1-201ENST00000354822 KRASP01116 189 aa18.62■□□□□ 0.57
NKX2-1-201ENST00000354822 RPL30P62888 115 aaKnown RBP18.62■□□□□ 0.57
NKX2-1-201ENST00000354822 ICAM4Q14773 271 aa18.62■□□□□ 0.57
NKX2-1-201ENST00000354822 TMEM14EPQ6UXP3 125 aa18.62■□□□□ 0.57
NKX2-1-201ENST00000354822 ZNF808Q8N4W9 903 aaPredicted RBP18.62■□□□□ 0.57
NKX2-1-201ENST00000354822 ZNF561Q8N587 486 aa18.62■□□□□ 0.57
NKX2-1-201ENST00000354822 OR10G4Q8NGN3 311 aa18.62■□□□□ 0.57
NKX2-1-201ENST00000354822 MBD3L1Q8WWY6 194 aa18.62■□□□□ 0.57
NKX2-1-201ENST00000354822 HSD17B10Q99714 261 aaKnown RBP18.62■□□□□ 0.57
NKX2-1-201ENST00000354822 RBKSQ9H477 322 aa18.62■□□□□ 0.57
NKX2-1-201ENST00000354822 PUS1Q9Y606 427 aaKnown RBP eCLIP18.62■□□□□ 0.57
NKX2-1-201ENST00000354822 LRRC30A6NM36 301 aa18.62■□□□□ 0.57
NKX2-1-201ENST00000354822 CLDN1O95832 211 aa18.62■□□□□ 0.57
NKX2-1-201ENST00000354822 CFHR2P36980 270 aa18.62■□□□□ 0.57
NKX2-1-201ENST00000354822 HAPLN4Q86UW8 402 aa18.62■□□□□ 0.57
NKX2-1-201ENST00000354822 OR2Z1Q8NG97 314 aa18.62■□□□□ 0.57
NKX2-1-201ENST00000354822 PPP1R35Q8TAP8 253 aa18.62■□□□□ 0.57
NKX2-1-201ENST00000354822 TCTEX1D2Q8WW35 142 aa18.62■□□□□ 0.57
NKX2-1-201ENST00000354822 RSG1Q9BU20 258 aa18.62■□□□□ 0.57
NKX2-1-201ENST00000354822 WDR61Q9GZS3 305 aaKnown RBP18.62■□□□□ 0.57
NKX2-1-201ENST00000354822 RAB29O14966 203 aa18.61■□□□□ 0.57
NKX2-1-201ENST00000354822 CLDN14O95500 239 aa18.61■□□□□ 0.57
NKX2-1-201ENST00000354822 GZMHP20718 246 aa18.61■□□□□ 0.57
NKX2-1-201ENST00000354822 ATP6V1FQ16864 119 aa18.61■□□□□ 0.57
NKX2-1-201ENST00000354822 C3orf36Q3SXR2 165 aa18.61■□□□□ 0.57
NKX2-1-201ENST00000354822 TIMM23BQ5SRD1 257 aa18.61■□□□□ 0.57
NKX2-1-201ENST00000354822 CD177Q8N6Q3 437 aa18.61■□□□□ 0.57
NKX2-1-201ENST00000354822 OR13A1Q8NGR1 328 aa18.61■□□□□ 0.57
NKX2-1-201ENST00000354822 C5orf30Q96GV9 206 aa18.61■□□□□ 0.57
NKX2-1-201ENST00000354822 RPRMQ9NS64 109 aa18.61■□□□□ 0.57
NKX2-1-201ENST00000354822 METRNQ9UJH8 293 aa18.61■□□□□ 0.57
NKX2-1-201ENST00000354822 G6PCP35575 357 aa18.61■□□□□ 0.57
NKX2-1-201ENST00000354822 ZNF816Q0VGE8 651 aaPredicted RBP18.61■□□□□ 0.57
NKX2-1-201ENST00000354822 EDARADDQ8WWZ3 215 aa18.61■□□□□ 0.57
NKX2-1-201ENST00000354822 SRRM5B3KS81 715 aa18.6■□□□□ 0.57
NKX2-1-201ENST00000354822 CIB3Q96Q77 187 aaPredicted RBP18.6■□□□□ 0.57
NKX2-1-201ENST00000354822 OR4C12Q96R67 309 aa18.6■□□□□ 0.57
NKX2-1-201ENST00000354822 TIMM9Q9Y5J7 89 aa18.6■□□□□ 0.57
NKX2-1-201ENST00000354822 H3BQ15 152 aa18.59■□□□□ 0.57
NKX2-1-201ENST00000354822 IFNA4P05014 189 aa18.59■□□□□ 0.57
NKX2-1-201ENST00000354822 DAOP14920 347 aa18.59■□□□□ 0.57
NKX2-1-201ENST00000354822 SSTR5P35346 364 aa18.59■□□□□ 0.57
NKX2-1-201ENST00000354822 SLC38A11Q08AI6 406 aa18.59■□□□□ 0.57
NKX2-1-201ENST00000354822 HABP2Q14520 560 aaPredicted RBP18.59■□□□□ 0.57
NKX2-1-201ENST00000354822 GTF3C1Q12789 2109 aa18.59■□□□□ 0.57
NKX2-1-201ENST00000354822 ODAMA1E959 279 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms