RNA–Protein interactions for RNA: ENST00000354363.10

PRPF40A-201, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 1,622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-201ENST00000354363 NAPSAO96009 420 aa11.2□□□□□ -0.62
PRPF40A-201ENST00000354363 HTR2CP28335 458 aa11.2□□□□□ -0.62
PRPF40A-201ENST00000354363 UNC119Q13432 240 aa11.2□□□□□ -0.62
PRPF40A-201ENST00000354363 ECSCRQ19T08 205 aa11.2□□□□□ -0.62
PRPF40A-201ENST00000354363 RPL39P5Q59GN2 51 aa11.2□□□□□ -0.62
PRPF40A-201ENST00000354363 GLT8D1Q68CQ7 371 aa11.2□□□□□ -0.62
PRPF40A-201ENST00000354363 ZNF660Q6AZW8 331 aaPredicted RBP11.2□□□□□ -0.62
PRPF40A-201ENST00000354363 ZNF880Q6PDB4 577 aa11.2□□□□□ -0.62
PRPF40A-201ENST00000354363 ZNF429Q86V71 674 aa11.2□□□□□ -0.62
PRPF40A-201ENST00000354363 NICN1Q9BSH3 213 aa11.2□□□□□ -0.62
PRPF40A-201ENST00000354363 TM2D1Q9BX74 207 aa11.2□□□□□ -0.62
PRPF40A-201ENST00000354363 FBXL15Q9H469 300 aa11.2□□□□□ -0.62
PRPF40A-201ENST00000354363 ISYNA1Q9NPH2 558 aa11.2□□□□□ -0.62
PRPF40A-201ENST00000354363 PIPOXQ9P0Z9 390 aa11.2□□□□□ -0.62
PRPF40A-201ENST00000354363 ERGIC3Q9Y282 383 aa11.2□□□□□ -0.62
PRPF40A-201ENST00000354363 SMAD5-AS1Q9Y6J3 95 aa11.2□□□□□ -0.62
PRPF40A-201ENST00000354363 STAB2Q8WWQ8 2551 aa11.19□□□□□ -0.62
PRPF40A-201ENST00000354363 A0A1W2PN81 502 aa11.19□□□□□ -0.62
PRPF40A-201ENST00000354363 RRHO14718 337 aa11.19□□□□□ -0.62
PRPF40A-201ENST00000354363 RAB29O14966 203 aa11.19□□□□□ -0.62
PRPF40A-201ENST00000354363 CT45A6P0DMU7 189 aa11.19□□□□□ -0.62
PRPF40A-201ENST00000354363 CT45A5P0DMU8 189 aa11.19□□□□□ -0.62
PRPF40A-201ENST00000354363 CT45A7P0DMV0 189 aa11.19□□□□□ -0.62
PRPF40A-201ENST00000354363 CHRNA7P36544 502 aa11.19□□□□□ -0.62
PRPF40A-201ENST00000354363 GABPB1Q06547 395 aaPredicted RBP11.19□□□□□ -0.62
PRPF40A-201ENST00000354363 RBM48Q5RL73 367 aaKnown RBP11.19□□□□□ -0.62
PRPF40A-201ENST00000354363 KCNG3Q8TAE7 436 aa11.19□□□□□ -0.62
PRPF40A-201ENST00000354363 PHYHIPQ92561 330 aa11.19□□□□□ -0.62
PRPF40A-201ENST00000354363 DLX4Q92988 240 aaPredicted RBP11.19□□□□□ -0.62
PRPF40A-201ENST00000354363 TOLLIPQ9H0E2 274 aa11.19□□□□□ -0.62
PRPF40A-201ENST00000354363 PARP12Q9H0J9 701 aaKnown RBP11.19□□□□□ -0.62
PRPF40A-201ENST00000354363 SLC23A1Q9UHI7 598 aa11.19□□□□□ -0.62
PRPF40A-201ENST00000354363 NUBP2Q9Y5Y2 271 aa11.19□□□□□ -0.62
PRPF40A-201ENST00000354363 A0A0A6YYD4 124 aa11.18□□□□□ -0.62
PRPF40A-201ENST00000354363 OR5H14A6NHG9 310 aa11.18□□□□□ -0.62
PRPF40A-201ENST00000354363 TMEM14DPA8MWL7 114 aa11.18□□□□□ -0.62
PRPF40A-201ENST00000354363 CD37P11049 281 aa11.18□□□□□ -0.62
PRPF40A-201ENST00000354363 EGR2P11161 476 aaPredicted RBP11.18□□□□□ -0.62
PRPF40A-201ENST00000354363 SLURP1P55000 103 aa11.18□□□□□ -0.62
PRPF40A-201ENST00000354363 CX3CL1P78423 397 aa11.18□□□□□ -0.62
PRPF40A-201ENST00000354363 QRFPP83859 136 aa11.18□□□□□ -0.62
PRPF40A-201ENST00000354363 RCN1Q15293 331 aa11.18□□□□□ -0.62
PRPF40A-201ENST00000354363 GLDNQ6ZMI3 551 aaPredicted RBP11.18□□□□□ -0.62
PRPF40A-201ENST00000354363 MS4A15Q8N5U1 240 aa11.18□□□□□ -0.62
PRPF40A-201ENST00000354363 CASTOR1Q8WTX7 329 aa11.18□□□□□ -0.62
PRPF40A-201ENST00000354363 ABHD14BQ96IU4 210 aa11.18□□□□□ -0.62
PRPF40A-201ENST00000354363 TMED9Q9BVK6 235 aa11.18□□□□□ -0.62
PRPF40A-201ENST00000354363 CHMP1AQ9HD42 196 aaPredicted RBP11.18□□□□□ -0.62
PRPF40A-201ENST00000354363 TPSG1Q9NRR2 321 aa11.18□□□□□ -0.62
PRPF40A-201ENST00000354363 FOXA2Q9Y261 457 aaPredicted RBP11.18□□□□□ -0.62
PRPF40A-201ENST00000354363 LINC01619G3V211 115 aa11.17□□□□□ -0.62
PRPF40A-201ENST00000354363 H0YJW9 148 aa11.17□□□□□ -0.62
PRPF40A-201ENST00000354363 FCN1O00602 326 aa11.17□□□□□ -0.62
PRPF40A-201ENST00000354363 SLC22A1O15245 554 aa11.17□□□□□ -0.62
PRPF40A-201ENST00000354363 SAP30O75446 220 aa11.17□□□□□ -0.62
PRPF40A-201ENST00000354363 PLGLAQ15195 96 aa11.17□□□□□ -0.62
PRPF40A-201ENST00000354363 MOB1BQ7L9L4 216 aa11.17□□□□□ -0.62
PRPF40A-201ENST00000354363 TCTEX1D1Q8N7M0 179 aa11.17□□□□□ -0.62
PRPF40A-201ENST00000354363 SETD6Q8TBK2 473 aa11.17□□□□□ -0.62
PRPF40A-201ENST00000354363 PLEKHJ1Q9NW61 149 aa11.17□□□□□ -0.62
PRPF40A-201ENST00000354363 A3GALT2U3KPV4 340 aa11.17□□□□□ -0.62
PRPF40A-201ENST00000354363 IGHV4OR15-8A0A075B7B6 117 aa11.17□□□□□ -0.62
PRPF40A-201ENST00000354363 A0A087WW49 117 aa11.17□□□□□ -0.62
PRPF40A-201ENST00000354363 TRBV6-6A0A0A6YYG2 114 aa11.17□□□□□ -0.62
PRPF40A-201ENST00000354363 C3orf84H3BNL1 204 aa11.17□□□□□ -0.62
PRPF40A-201ENST00000354363 ITGB1BP1O14713 200 aa11.17□□□□□ -0.62
PRPF40A-201ENST00000354363 CDK1P06493 297 aa11.17□□□□□ -0.62
PRPF40A-201ENST00000354363 LGALS1P09382 135 aaKnown RBP11.17□□□□□ -0.62
PRPF40A-201ENST00000354363 SPNP16150 400 aa11.17□□□□□ -0.62
PRPF40A-201ENST00000354363 SRMP19623 302 aa11.17□□□□□ -0.62
PRPF40A-201ENST00000354363 MC5RP33032 325 aa11.17□□□□□ -0.62
PRPF40A-201ENST00000354363 OGFRL1Q5TC84 451 aaPredicted RBP11.17□□□□□ -0.62
PRPF40A-201ENST00000354363 RNLSQ5VYX0 342 aa11.17□□□□□ -0.62
PRPF40A-201ENST00000354363 CD200R1LQ6Q8B3 271 aa11.17□□□□□ -0.62
PRPF40A-201ENST00000354363 OR5AN1Q8NGI8 311 aa11.17□□□□□ -0.62
PRPF40A-201ENST00000354363 AGMATQ9BSE5 352 aa11.17□□□□□ -0.62
PRPF40A-201ENST00000354363 HDHD3Q9BSH5 251 aaPredicted RBP11.17□□□□□ -0.62
PRPF40A-201ENST00000354363 MND1Q9BWT6 205 aa11.17□□□□□ -0.62
PRPF40A-201ENST00000354363 GAB2Q9UQC2 676 aa11.17□□□□□ -0.62
PRPF40A-201ENST00000354363 WASHC3Q9Y3C0 194 aa11.17□□□□□ -0.62
PRPF40A-201ENST00000354363 RBBP9O75884 186 aa11.16□□□□□ -0.62
PRPF40A-201ENST00000354363 BPNT1O95861 308 aa11.16□□□□□ -0.62
PRPF40A-201ENST00000354363 GSTP1P09211 210 aaKnown RBP11.16□□□□□ -0.62
PRPF40A-201ENST00000354363 TMEM267Q0VDI3 215 aaPredicted RBP11.16□□□□□ -0.62
PRPF40A-201ENST00000354363 HSD17B12Q53GQ0 312 aa11.16□□□□□ -0.62
PRPF40A-201ENST00000354363 CEACAM19Q7Z692 300 aa11.16□□□□□ -0.62
PRPF40A-201ENST00000354363 PPP1R27Q86WC6 154 aa11.16□□□□□ -0.62
PRPF40A-201ENST00000354363 SBSPONQ8IVN8 264 aa11.16□□□□□ -0.62
PRPF40A-201ENST00000354363 ABHD5Q8WTS1 349 aa11.16□□□□□ -0.62
PRPF40A-201ENST00000354363 C11orf54Q9H0W9 315 aaPredicted RBP11.16□□□□□ -0.62
PRPF40A-201ENST00000354363 LPAR5Q9H1C0 372 aa11.16□□□□□ -0.62
PRPF40A-201ENST00000354363 GHITMQ9H3K2 345 aa11.16□□□□□ -0.62
PRPF40A-201ENST00000354363 RIMS4Q9H426 269 aaPredicted RBP11.16□□□□□ -0.62
PRPF40A-201ENST00000354363 OR1A1Q9P1Q5 309 aa11.16□□□□□ -0.62
PRPF40A-201ENST00000354363 AK3Q9UIJ7 227 aa11.16□□□□□ -0.62
PRPF40A-201ENST00000354363 LSM2Q9Y333 95 aaKnown RBP11.16□□□□□ -0.62
PRPF40A-201ENST00000354363 H7C2Y5 167 aa11.15□□□□□ -0.62
PRPF40A-201ENST00000354363 CASQ2O14958 399 aaPredicted RBP11.15□□□□□ -0.62
PRPF40A-201ENST00000354363 SOCS1O15524 211 aa11.15□□□□□ -0.62
PRPF40A-201ENST00000354363 UCHL1P09936 223 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms