RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 ERVFRD-1P60508 538 aa16.92■□□□□ 0.3
TRIM4-202ENST00000354241 TMEM30BQ3MIR4 351 aa16.92■□□□□ 0.3
TRIM4-202ENST00000354241 BTNL3Q6UXE8 466 aa16.92■□□□□ 0.3
TRIM4-202ENST00000354241 SLC35G3Q8N808 338 aa16.92■□□□□ 0.3
TRIM4-202ENST00000354241 SLC31A2O15432 143 aa16.91■□□□□ 0.3
TRIM4-202ENST00000354241 ZNF134P52741 427 aa16.91■□□□□ 0.3
TRIM4-202ENST00000354241 CYCSP99999 105 aaKnown RBP16.91■□□□□ 0.3
TRIM4-202ENST00000354241 Q3ZCU0 254 aa16.91■□□□□ 0.3
TRIM4-202ENST00000354241 OR52M1Q8NGK5 317 aa16.91■□□□□ 0.3
TRIM4-202ENST00000354241 PPP1R1CQ8WVI7 109 aa16.91■□□□□ 0.3
TRIM4-202ENST00000354241 C2orf50Q96LR7 162 aa16.91■□□□□ 0.3
TRIM4-202ENST00000354241 TMEM56Q96MV1 263 aa16.91■□□□□ 0.3
TRIM4-202ENST00000354241 ABHD14AQ9BUJ0 271 aa16.91■□□□□ 0.3
TRIM4-202ENST00000354241 NMES1Q9C002 83 aa16.91■□□□□ 0.3
TRIM4-202ENST00000354241 PLSCR3Q9NRY6 295 aa16.91■□□□□ 0.3
TRIM4-202ENST00000354241 LIN7CQ9NUP9 197 aaKnown RBP16.91■□□□□ 0.3
TRIM4-202ENST00000354241 SDHAF2Q9NX18 166 aa16.91■□□□□ 0.3
TRIM4-202ENST00000354241 GSKIPQ9P0R6 139 aa16.91■□□□□ 0.3
TRIM4-202ENST00000354241 RPUSD1Q9UJJ7 312 aaKnown RBP16.91■□□□□ 0.3
TRIM4-202ENST00000354241 TMEM56-RWDD3S4R434 201 aa16.91■□□□□ 0.3
TRIM4-202ENST00000354241 TRBV23-1A0A0A0MS06 115 aa16.9■□□□□ 0.3
TRIM4-202ENST00000354241 A0A1W2PPE3 182 aa16.9■□□□□ 0.3
TRIM4-202ENST00000354241 RNF212BA8MTL3 300 aa16.9■□□□□ 0.3
TRIM4-202ENST00000354241 WNT2P09544 360 aa16.9■□□□□ 0.3
TRIM4-202ENST00000354241 FGL1Q08830 312 aa16.9■□□□□ 0.3
TRIM4-202ENST00000354241 MSMO1Q15800 293 aa16.9■□□□□ 0.3
TRIM4-202ENST00000354241 SELENOHQ8IZQ5 122 aaKnown RBP16.9■□□□□ 0.3
TRIM4-202ENST00000354241 UBR5O95071 2799 aaPredicted RBP16.9■□□□□ 0.3
TRIM4-202ENST00000354241 FXYD6-FXYD2A0A087WZ82 144 aa16.9■□□□□ 0.3
TRIM4-202ENST00000354241 TRAV14DV4A0A0A6YYC5 116 aa16.9■□□□□ 0.3
TRIM4-202ENST00000354241 B3GALNT1O75752 331 aa16.9■□□□□ 0.3
TRIM4-202ENST00000354241 GNG10P50151 68 aa16.9■□□□□ 0.3
TRIM4-202ENST00000354241 IAH1Q2TAA2 248 aaPredicted RBP16.9■□□□□ 0.3
TRIM4-202ENST00000354241 C9orf62Q8N4C0 152 aa16.9■□□□□ 0.3
TRIM4-202ENST00000354241 OR10A7Q8NGE5 316 aa16.9■□□□□ 0.3
TRIM4-202ENST00000354241 FAM216AQ8WUB2 273 aa16.9■□□□□ 0.3
TRIM4-202ENST00000354241 HSPB11Q9Y547 144 aa16.9■□□□□ 0.3
TRIM4-202ENST00000354241 CDS2O95674 445 aa16.89■□□□□ 0.29
TRIM4-202ENST00000354241 SERPINE2P07093 398 aa16.89■□□□□ 0.29
TRIM4-202ENST00000354241 RAB7AP51149 207 aa16.89■□□□□ 0.29
TRIM4-202ENST00000354241 CT45A1Q5HYN5 189 aa16.89■□□□□ 0.29
TRIM4-202ENST00000354241 WDR25Q64LD2 544 aaPredicted RBP16.89■□□□□ 0.29
TRIM4-202ENST00000354241 LAMTOR1Q6IAA8 161 aa16.89■□□□□ 0.29
TRIM4-202ENST00000354241 HEPN1Q6WQI6 88 aa16.89■□□□□ 0.29
TRIM4-202ENST00000354241 CT45A3Q8NHU0 189 aa16.89■□□□□ 0.29
TRIM4-202ENST00000354241 IFI27L2Q9H2X8 130 aa16.89■□□□□ 0.29
TRIM4-202ENST00000354241 ITGB1BP1O14713 200 aa16.88■□□□□ 0.29
TRIM4-202ENST00000354241 GPR37O15354 613 aa16.88■□□□□ 0.29
TRIM4-202ENST00000354241 CATR1Q13166 79 aa16.88■□□□□ 0.29
TRIM4-202ENST00000354241 EIF4EBP1Q13541 118 aaPredicted RBP16.88■□□□□ 0.29
TRIM4-202ENST00000354241 IGFBPL1Q8WX77 278 aa16.88■□□□□ 0.29
TRIM4-202ENST00000354241 RBPMSQ93062 196 aaKnown RBP16.88■□□□□ 0.29
TRIM4-202ENST00000354241 PATZ1Q9HBE1 687 aaKnown RBP16.88■□□□□ 0.29
TRIM4-202ENST00000354241 TMED3Q9Y3Q3 217 aa16.88■□□□□ 0.29
TRIM4-202ENST00000354241 DCHS2Q6V1P9 2916 aa16.88■□□□□ 0.29
TRIM4-202ENST00000354241 RPL30P62888 115 aaKnown RBP16.88■□□□□ 0.29
TRIM4-202ENST00000354241 ZNF525Q8N782 197 aa16.88■□□□□ 0.29
TRIM4-202ENST00000354241 ZNF439Q8NDP4 499 aa16.88■□□□□ 0.29
TRIM4-202ENST00000354241 TCTEX1D2Q8WW35 142 aa16.88■□□□□ 0.29
TRIM4-202ENST00000354241 COL12A1Q99715 3063 aa16.87■□□□□ 0.29
TRIM4-202ENST00000354241 DLX6P56179 175 aa16.87■□□□□ 0.29
TRIM4-202ENST00000354241 GNB2P62879 340 aa16.87■□□□□ 0.29
TRIM4-202ENST00000354241 OR2B11Q5JQS5 317 aa16.87■□□□□ 0.29
TRIM4-202ENST00000354241 FAM208BQ5VWN6 2430 aa16.87■□□□□ 0.29
TRIM4-202ENST00000354241 AKAP6Q13023 2319 aa16.86■□□□□ 0.29
TRIM4-202ENST00000354241 MPC2O95563 127 aa16.86■□□□□ 0.29
TRIM4-202ENST00000354241 IGHV4-39P01824 125 aa16.86■□□□□ 0.29
TRIM4-202ENST00000354241 PLA2G2AP14555 144 aa16.86■□□□□ 0.29
TRIM4-202ENST00000354241 PSMB6P28072 239 aa16.86■□□□□ 0.29
TRIM4-202ENST00000354241 RPL39P5Q59GN2 51 aa16.86■□□□□ 0.29
TRIM4-202ENST00000354241 C11orf87Q6NUJ2 197 aa16.86■□□□□ 0.29
TRIM4-202ENST00000354241 ZNF66Q6ZN08 573 aa16.86■□□□□ 0.29
TRIM4-202ENST00000354241 FAM219AQ8IW50 185 aa16.86■□□□□ 0.29
TRIM4-202ENST00000354241 IL22RA2Q969J5 263 aa16.86■□□□□ 0.29
TRIM4-202ENST00000354241 RAB39BQ96DA2 213 aa16.86■□□□□ 0.29
TRIM4-202ENST00000354241 HSD17B10Q99714 261 aaKnown RBP16.86■□□□□ 0.29
TRIM4-202ENST00000354241 M0R1X1 148 aa16.86■□□□□ 0.29
TRIM4-202ENST00000354241 ARPC5O15511 151 aa16.86■□□□□ 0.29
TRIM4-202ENST00000354241 LYG1Q8N1E2 194 aa16.86■□□□□ 0.29
TRIM4-202ENST00000354241 THAP6Q8TBB0 222 aa16.86■□□□□ 0.29
TRIM4-202ENST00000354241 MALRD1Q5VYJ5 2156 aa16.85■□□□□ 0.29
TRIM4-202ENST00000354241 PPIAL4CA0A0B4J2A2 164 aa16.85■□□□□ 0.29
TRIM4-202ENST00000354241 DUXBA0A1W2PPF3 345 aa16.85■□□□□ 0.29
TRIM4-202ENST00000354241 PPIAL4GP0DN37 164 aa16.85■□□□□ 0.29
TRIM4-202ENST00000354241 LINC00205P59089 165 aa16.85■□□□□ 0.29
TRIM4-202ENST00000354241 LGALSLQ3ZCW2 172 aaPredicted RBP16.85■□□□□ 0.29
TRIM4-202ENST00000354241 ZNF585BQ52M93 769 aa16.85■□□□□ 0.29
TRIM4-202ENST00000354241 A0A1W2PPH5 198 aa16.84■□□□□ 0.29
TRIM4-202ENST00000354241 CLEC18AA5D8T8 446 aa16.84■□□□□ 0.29
TRIM4-202ENST00000354241 LINC00473A8K010 186 aa16.84■□□□□ 0.29
TRIM4-202ENST00000354241 F5H0A9 414 aaPredicted RBP16.84■□□□□ 0.29
TRIM4-202ENST00000354241 SCGB1D2O95969 90 aa16.84■□□□□ 0.29
TRIM4-202ENST00000354241 S100A10P60903 97 aa16.84■□□□□ 0.29
TRIM4-202ENST00000354241 RAB32Q13637 225 aa16.84■□□□□ 0.29
TRIM4-202ENST00000354241 SLC25A48Q6ZT89 311 aaKnown RBP16.84■□□□□ 0.29
TRIM4-202ENST00000354241 CLEC18CQ8NCF0 446 aa16.84■□□□□ 0.29
TRIM4-202ENST00000354241 SSBP3Q9BWW4 388 aaPredicted RBP16.84■□□□□ 0.29
TRIM4-202ENST00000354241 MBD2Q9UBB5 411 aa16.84■□□□□ 0.29
TRIM4-202ENST00000354241 SAA2-SAA4A0A096LPE2 208 aa16.84■□□□□ 0.29
TRIM4-202ENST00000354241 HMSDA8MTL9 139 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms