RNA–Protein interactions for RNA: ENST00000354193.4

SVIP-201, Transcript of small VCP interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SVIP, Length 4,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-201ENST00000354193 ZNF250P15622 560 aa9.29□□□□□ -0.92
SVIP-201ENST00000354193 GZMHP20718 246 aa9.29□□□□□ -0.92
SVIP-201ENST00000354193 MPZP25189 248 aa9.29□□□□□ -0.92
SVIP-201ENST00000354193 APOBEC3AP31941 199 aaPredicted RBP9.29□□□□□ -0.92
SVIP-201ENST00000354193 ZNF324BQ6AW86 544 aaPredicted RBP9.29□□□□□ -0.92
SVIP-201ENST00000354193 STX12Q86Y82 276 aa9.29□□□□□ -0.92
SVIP-201ENST00000354193 S1PR3Q99500 378 aa9.29□□□□□ -0.92
SVIP-201ENST00000354193 TMEM106BQ9NUM4 274 aa9.29□□□□□ -0.92
SVIP-201ENST00000354193 CALYQ9NYX4 217 aa9.29□□□□□ -0.92
SVIP-201ENST00000354193 IL19Q9UHD0 177 aa9.29□□□□□ -0.92
SVIP-201ENST00000354193 COL27A1Q8IZC6 1860 aaPredicted RBP9.29□□□□□ -0.92
SVIP-201ENST00000354193 IGHV1-69-2A0A0G2JMI3 117 aa9.28□□□□□ -0.92
SVIP-201ENST00000354193 SFTPCP11686 197 aa9.28□□□□□ -0.92
SVIP-201ENST00000354193 TMEM33P57088 247 aa9.28□□□□□ -0.92
SVIP-201ENST00000354193 SRPXP78539 464 aa9.28□□□□□ -0.92
SVIP-201ENST00000354193 ZNF146Q15072 292 aa9.28□□□□□ -0.92
SVIP-201ENST00000354193 DHRS11Q6UWP2 260 aa9.28□□□□□ -0.92
SVIP-201ENST00000354193 LINC00596Q86U02 117 aa9.28□□□□□ -0.92
SVIP-201ENST00000354193 C11orf53Q8IXP5 236 aa9.28□□□□□ -0.92
SVIP-201ENST00000354193 FBXL17Q9UF56 701 aa9.28□□□□□ -0.92
SVIP-201ENST00000354193 H0YIZ8 118 aa9.28□□□□□ -0.92
SVIP-201ENST00000354193 CA11O75493 328 aa9.28□□□□□ -0.92
SVIP-201ENST00000354193 ACTL6BO94805 426 aa9.28□□□□□ -0.92
SVIP-201ENST00000354193 MBPP02686 304 aaPredicted RBP9.28□□□□□ -0.92
SVIP-201ENST00000354193 PLGLAQ15195 96 aa9.28□□□□□ -0.92
SVIP-201ENST00000354193 ZNF497Q6ZNH5 498 aa9.28□□□□□ -0.92
SVIP-201ENST00000354193 Q6ZPA2 131 aa9.28□□□□□ -0.92
SVIP-201ENST00000354193 SNX22Q96L94 193 aa9.28□□□□□ -0.92
SVIP-201ENST00000354193 CNTNAP3Q9BZ76 1288 aa9.28□□□□□ -0.92
SVIP-201ENST00000354193 MYOZ1Q9NP98 299 aaPredicted RBP9.28□□□□□ -0.92
SVIP-201ENST00000354193 MTORP42345 2549 aa9.28□□□□□ -0.92
SVIP-201ENST00000354193 hADV38S2A0JD32 116 aa9.28□□□□□ -0.92
SVIP-201ENST00000354193 TOR1AO14656 332 aa9.28□□□□□ -0.92
SVIP-201ENST00000354193 SNAPC5O75971 98 aa9.28□□□□□ -0.92
SVIP-201ENST00000354193 IFNA4P05014 189 aa9.28□□□□□ -0.92
SVIP-201ENST00000354193 RPL23AP62750 156 aaKnown RBP9.28□□□□□ -0.92
SVIP-201ENST00000354193 MRPS11P82912 194 aaKnown RBP9.28□□□□□ -0.92
SVIP-201ENST00000354193 OR2F1Q13607 317 aa9.28□□□□□ -0.92
SVIP-201ENST00000354193 TMEM187Q14656 261 aa9.28□□□□□ -0.92
SVIP-201ENST00000354193 EIF5AL1Q6IS14 154 aaKnown RBP9.28□□□□□ -0.92
SVIP-201ENST00000354193 OR4A16Q8NH70 328 aa9.28□□□□□ -0.92
SVIP-201ENST00000354193 SCGB1C1Q8TD33 95 aa9.28□□□□□ -0.92
SVIP-201ENST00000354193 TIMD4Q96H15 378 aa9.28□□□□□ -0.92
SVIP-201ENST00000354193 ENY2Q9NPA8 101 aa9.28□□□□□ -0.92
SVIP-201ENST00000354193 TMED3Q9Y3Q3 217 aa9.28□□□□□ -0.92
SVIP-201ENST00000354193 RNF212BA8MTL3 300 aa9.28□□□□□ -0.92
SVIP-201ENST00000354193 SIGLEC5O15389 551 aa9.28□□□□□ -0.92
SVIP-201ENST00000354193 TXNL1O43396 289 aa9.28□□□□□ -0.92
SVIP-201ENST00000354193 CAMLGP49069 296 aa9.28□□□□□ -0.92
SVIP-201ENST00000354193 ST6GALNAC3Q8NDV1 305 aa9.28□□□□□ -0.92
SVIP-201ENST00000354193 SDSLQ96GA7 329 aa9.28□□□□□ -0.92
SVIP-201ENST00000354193 TMEM222Q9H0R3 208 aa9.28□□□□□ -0.92
SVIP-201ENST00000354193 ACANP16112 2415 aa9.27□□□□□ -0.92
SVIP-201ENST00000354193 VDAC1P21796 283 aa9.27□□□□□ -0.92
SVIP-201ENST00000354193 P2RX3P56373 397 aa9.27□□□□□ -0.92
SVIP-201ENST00000354193 PRSS54Q6PEW0 395 aa9.27□□□□□ -0.92
SVIP-201ENST00000354193 OR5D13Q8NGL4 314 aa9.27□□□□□ -0.92
SVIP-201ENST00000354193 ERGIC1Q969X5 290 aa9.27□□□□□ -0.92
SVIP-201ENST00000354193 CXorf58Q96LI9 332 aa9.27□□□□□ -0.92
SVIP-201ENST00000354193 SIRT7Q9NRC8 400 aa9.27□□□□□ -0.92
SVIP-201ENST00000354193 FBXO7Q9Y3I1 522 aa9.27□□□□□ -0.92
SVIP-201ENST00000354193 FLNBO75369 2602 aaKnown RBP9.27□□□□□ -0.93
SVIP-201ENST00000354193 USP24Q9UPU5 2620 aa9.27□□□□□ -0.93
SVIP-201ENST00000354193 FOXI3A8MTJ6 420 aaPredicted RBP9.27□□□□□ -0.93
SVIP-201ENST00000354193 EIF5AP63241 154 aaKnown RBP9.27□□□□□ -0.93
SVIP-201ENST00000354193 HES1Q14469 280 aa9.27□□□□□ -0.93
SVIP-201ENST00000354193 MSMO1Q15800 293 aa9.27□□□□□ -0.93
SVIP-201ENST00000354193 LYPD2Q6UXB3 125 aa9.27□□□□□ -0.93
SVIP-201ENST00000354193 BAP18Q8IXM2 172 aa9.27□□□□□ -0.93
SVIP-201ENST00000354193 FAM213BQ8TBF2 198 aa9.27□□□□□ -0.93
SVIP-201ENST00000354193 RAB1BQ9H0U4 201 aa9.27□□□□□ -0.93
SVIP-201ENST00000354193 IGSF10Q6WRI0 2623 aa9.27□□□□□ -0.93
SVIP-201ENST00000354193 DOPEY1Q5JWR5 2465 aa9.27□□□□□ -0.93
SVIP-201ENST00000354193 RAMP3O60896 148 aa9.27□□□□□ -0.93
SVIP-201ENST00000354193 IFNA5P01569 189 aa9.27□□□□□ -0.93
SVIP-201ENST00000354193 PAX6P26367 422 aa9.27□□□□□ -0.93
SVIP-201ENST00000354193 FAM76BQ5HYJ3 339 aa9.27□□□□□ -0.93
SVIP-201ENST00000354193 LRRC20Q8TCA0 184 aa9.27□□□□□ -0.93
SVIP-201ENST00000354193 PRSS44E7EML9 344 aa9.26□□□□□ -0.93
SVIP-201ENST00000354193 NDUFS7O75251 213 aa9.26□□□□□ -0.93
SVIP-201ENST00000354193 RCC2Q9P258 522 aaKnown RBP9.26□□□□□ -0.93
SVIP-201ENST00000354193 CLN8Q9UBY8 286 aa9.26□□□□□ -0.93
SVIP-201ENST00000354193 TRBV6-7A0A0A0MS04 114 aa9.26□□□□□ -0.93
SVIP-201ENST00000354193 E5RGE8 158 aa9.26□□□□□ -0.93
SVIP-201ENST00000354193 SHOXO15266 292 aa9.26□□□□□ -0.93
SVIP-201ENST00000354193 SOX15O60248 233 aa9.26□□□□□ -0.93
SVIP-201ENST00000354193 S1PR2O95136 353 aa9.26□□□□□ -0.93
SVIP-201ENST00000354193 ELLP55199 621 aaPredicted RBP9.26□□□□□ -0.93
SVIP-201ENST00000354193 OR5C1Q8NGR4 320 aa9.26□□□□□ -0.93
SVIP-201ENST00000354193 TNFSF18Q9UNG2 199 aa9.26□□□□□ -0.93
SVIP-201ENST00000354193 TACC2O95359 2948 aa9.26□□□□□ -0.93
SVIP-201ENST00000354193 DYSFO75923 2080 aa9.26□□□□□ -0.93
SVIP-201ENST00000354193 C17orf98A8MV24 154 aa9.26□□□□□ -0.93
SVIP-201ENST00000354193 BCL2L11O43521 198 aa9.26□□□□□ -0.93
SVIP-201ENST00000354193 TUBG1P23258 451 aa9.26□□□□□ -0.93
SVIP-201ENST00000354193 ARF6P62330 175 aa9.26□□□□□ -0.93
SVIP-201ENST00000354193 TMEM182Q6ZP80 229 aaPredicted RBP9.26□□□□□ -0.93
SVIP-201ENST00000354193 C1orf174Q8IYL3 243 aa9.26□□□□□ -0.93
SVIP-201ENST00000354193 SLC25A32Q9H2D1 315 aa9.26□□□□□ -0.93
SVIP-201ENST00000354193 TUBG2Q9NRH3 451 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms