RNA–Protein interactions for RNA: ENST00000344550.4

CEACAM3-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CEACAM3, Length 1,022 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-201ENST00000344550 HLA-DRB3P79483 266 aa15.77■□□□□ 0.12
CEACAM3-201ENST00000344550 ARL6IP1Q15041 203 aa15.77■□□□□ 0.12
CEACAM3-201ENST00000344550 MMDQ15546 238 aa15.77■□□□□ 0.12
CEACAM3-201ENST00000344550 NPBQ8NG41 125 aa15.77■□□□□ 0.12
CEACAM3-201ENST00000344550 ARHGAP5-AS1Q96IT6 56 aa15.77■□□□□ 0.12
CEACAM3-201ENST00000344550 RNF5Q99942 180 aa15.77■□□□□ 0.12
CEACAM3-201ENST00000344550 CMSS1Q9BQ75 279 aaKnown RBP15.77■□□□□ 0.12
CEACAM3-201ENST00000344550 ZNF251Q9BRH9 671 aa15.77■□□□□ 0.12
CEACAM3-201ENST00000344550 AGMATQ9BSE5 352 aa15.77■□□□□ 0.12
CEACAM3-201ENST00000344550 MCRIP2Q9BUT9 160 aaKnown RBP15.77■□□□□ 0.12
CEACAM3-201ENST00000344550 PECRQ9BY49 303 aa15.77■□□□□ 0.12
CEACAM3-201ENST00000344550 MRPL20Q9BYC9 149 aaKnown RBP15.77■□□□□ 0.12
CEACAM3-201ENST00000344550 RBBP9O75884 186 aa15.76■□□□□ 0.11
CEACAM3-201ENST00000344550 IGHG4P01861 327 aa15.76■□□□□ 0.11
CEACAM3-201ENST00000344550 HLA-DRB1P01911 266 aa15.76■□□□□ 0.11
CEACAM3-201ENST00000344550 GADD45AP24522 165 aa15.76■□□□□ 0.11
CEACAM3-201ENST00000344550 THBS3P49746 956 aa15.76■□□□□ 0.11
CEACAM3-201ENST00000344550 ACTBP60709 375 aa15.76■□□□□ 0.11
CEACAM3-201ENST00000344550 MRPS15P82914 257 aaKnown RBP15.76■□□□□ 0.11
CEACAM3-201ENST00000344550 CXorf66Q5JRM2 361 aaPredicted RBP15.76■□□□□ 0.11
CEACAM3-201ENST00000344550 Q6ZPA2 131 aa15.76■□□□□ 0.11
CEACAM3-201ENST00000344550 ZNF695Q8IW36 515 aa15.76■□□□□ 0.11
CEACAM3-201ENST00000344550 LINC00482Q8N8I6 264 aa15.76■□□□□ 0.11
CEACAM3-201ENST00000344550 SETD6Q8TBK2 473 aa15.76■□□□□ 0.11
CEACAM3-201ENST00000344550 RAB3CQ96E17 227 aa15.76■□□□□ 0.11
CEACAM3-201ENST00000344550 TOLLIPQ9H0E2 274 aa15.76■□□□□ 0.11
CEACAM3-201ENST00000344550 ZNF107Q9UII5 783 aaPredicted RBP15.76■□□□□ 0.11
CEACAM3-201ENST00000344550 TMEM272A0A1B0GTI8 110 aa15.75■□□□□ 0.11
CEACAM3-201ENST00000344550 METTL21EPA6NDL7 271 aa15.75■□□□□ 0.11
CEACAM3-201ENST00000344550 LINC01548A6NM66 108 aa15.75■□□□□ 0.11
CEACAM3-201ENST00000344550 TRDCB7Z8K6 153 aa15.75■□□□□ 0.11
CEACAM3-201ENST00000344550 NBR2O15453 112 aa15.75■□□□□ 0.11
CEACAM3-201ENST00000344550 HSPA12AO43301 675 aa15.75■□□□□ 0.11
CEACAM3-201ENST00000344550 RAB3BP20337 219 aa15.75■□□□□ 0.11
CEACAM3-201ENST00000344550 VDAC1P21796 283 aa15.75■□□□□ 0.11
CEACAM3-201ENST00000344550 CEACAM6P40199 344 aa15.75■□□□□ 0.11
CEACAM3-201ENST00000344550 CDX1P47902 265 aaPredicted RBP15.75■□□□□ 0.11
CEACAM3-201ENST00000344550 CLDN12P56749 244 aa15.75■□□□□ 0.11
CEACAM3-201ENST00000344550 CFHR3Q02985 330 aa15.75■□□□□ 0.11
CEACAM3-201ENST00000344550 KIR2DS1Q14954 304 aa15.75■□□□□ 0.11
CEACAM3-201ENST00000344550 SRSF7Q16629 238 aaKnown RBP eCLIP15.75■□□□□ 0.11
CEACAM3-201ENST00000344550 OR4A4PQ8NGN8 299 aa15.75■□□□□ 0.11
CEACAM3-201ENST00000344550 CYYR1Q96J86 154 aa15.75■□□□□ 0.11
CEACAM3-201ENST00000344550 KIAA1456Q9P272 454 aa15.75■□□□□ 0.11
CEACAM3-201ENST00000344550 ZMAT5Q9UDW3 170 aaKnown RBP15.75■□□□□ 0.11
CEACAM3-201ENST00000344550 PRKDCP78527 4128 aaKnown RBP15.75■□□□□ 0.11
CEACAM3-201ENST00000344550 NDUFA3O95167 84 aa15.74■□□□□ 0.11
CEACAM3-201ENST00000344550 OR3A3P47888 321 aa15.74■□□□□ 0.11
CEACAM3-201ENST00000344550 C5orf64Q2M2E5 130 aa15.74■□□□□ 0.11
CEACAM3-201ENST00000344550 PLAC9Q5JTB6 97 aa15.74■□□□□ 0.11
CEACAM3-201ENST00000344550 TPRA1Q86W33 373 aa15.74■□□□□ 0.11
CEACAM3-201ENST00000344550 SPARTQ8N0X7 666 aa15.74■□□□□ 0.11
CEACAM3-201ENST00000344550 OR5AN1Q8NGI8 311 aa15.74■□□□□ 0.11
CEACAM3-201ENST00000344550 LINC00527Q9UJ94 153 aa15.74■□□□□ 0.11
CEACAM3-201ENST00000344550 NUDT19A8MXV4 375 aa15.73■□□□□ 0.11
CEACAM3-201ENST00000344550 ST8SIA5O15466 376 aa15.73■□□□□ 0.11
CEACAM3-201ENST00000344550 CD3GP09693 182 aa15.73■□□□□ 0.11
CEACAM3-201ENST00000344550 IGLL1P15814 213 aa15.73■□□□□ 0.11
CEACAM3-201ENST00000344550 HES5Q5TA89 166 aa15.73■□□□□ 0.11
CEACAM3-201ENST00000344550 FOXB2Q5VYV0 432 aa15.73■□□□□ 0.11
CEACAM3-201ENST00000344550 LIN54Q6MZP7 749 aa15.73■□□□□ 0.11
CEACAM3-201ENST00000344550 C5orf24Q7Z6I8 188 aa15.73■□□□□ 0.11
CEACAM3-201ENST00000344550 MRPL41Q8IXM3 137 aaKnown RBP15.73■□□□□ 0.11
CEACAM3-201ENST00000344550 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.73■□□□□ 0.11
CEACAM3-201ENST00000344550 OR10R2Q8NGX6 335 aa15.73■□□□□ 0.11
CEACAM3-201ENST00000344550 P2RX4Q99571 388 aa15.73■□□□□ 0.11
CEACAM3-201ENST00000344550 HSPB9Q9BQS6 159 aa15.73■□□□□ 0.11
CEACAM3-201ENST00000344550 HDHD3Q9BSH5 251 aaPredicted RBP15.73■□□□□ 0.11
CEACAM3-201ENST00000344550 C11orf54Q9H0W9 315 aaPredicted RBP15.73■□□□□ 0.11
CEACAM3-201ENST00000344550 GAB2Q9UQC2 676 aa15.73■□□□□ 0.11
CEACAM3-201ENST00000344550 SCTP09683 121 aa15.72■□□□□ 0.11
CEACAM3-201ENST00000344550 CT45A6P0DMU7 189 aa15.72■□□□□ 0.11
CEACAM3-201ENST00000344550 CT45A5P0DMU8 189 aa15.72■□□□□ 0.11
CEACAM3-201ENST00000344550 CT45A7P0DMV0 189 aa15.72■□□□□ 0.11
CEACAM3-201ENST00000344550 PSMB8P28062 276 aa15.72■□□□□ 0.11
CEACAM3-201ENST00000344550 ETV3LQ6ZN32 361 aa15.72■□□□□ 0.11
CEACAM3-201ENST00000344550 Q6ZS49 121 aa15.72■□□□□ 0.11
CEACAM3-201ENST00000344550 KLHL30-AS1Q8NEE0 82 aa15.72■□□□□ 0.11
CEACAM3-201ENST00000344550 OR51J1Q9H342 316 aa15.72■□□□□ 0.11
CEACAM3-201ENST00000344550 ZNF221Q9UK13 617 aa15.72■□□□□ 0.11
CEACAM3-201ENST00000344550 WASHC3Q9Y3C0 194 aa15.72■□□□□ 0.11
CEACAM3-201ENST00000344550 SHISA3A0PJX4 238 aa15.71■□□□□ 0.11
CEACAM3-201ENST00000344550 RAB27BO00194 218 aa15.71■□□□□ 0.11
CEACAM3-201ENST00000344550 SCGNO76038 276 aa15.71■□□□□ 0.11
CEACAM3-201ENST00000344550 ZNF660Q6AZW8 331 aaPredicted RBP15.71■□□□□ 0.11
CEACAM3-201ENST00000344550 C22orf42Q6IC83 251 aa15.71■□□□□ 0.11
CEACAM3-201ENST00000344550 TCTEX1D1Q8N7M0 179 aa15.71■□□□□ 0.11
CEACAM3-201ENST00000344550 OR8U1Q8NH10 309 aa15.71■□□□□ 0.11
CEACAM3-201ENST00000344550 DPF1Q92782 380 aa15.71■□□□□ 0.11
CEACAM3-201ENST00000344550 KCTD7Q96MP8 289 aa15.71■□□□□ 0.11
CEACAM3-201ENST00000344550 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.71■□□□□ 0.11
CEACAM3-201ENST00000344550 STUB1Q9UNE7 303 aa15.71■□□□□ 0.11
CEACAM3-201ENST00000344550 KCNK7Q9Y2U2 307 aa15.71■□□□□ 0.11
CEACAM3-201ENST00000344550 NOTOA8MTQ0 251 aa15.7■□□□□ 0.1
CEACAM3-201ENST00000344550 H0YJW9 148 aa15.7■□□□□ 0.1
CEACAM3-201ENST00000344550 MFNGO00587 321 aa15.7■□□□□ 0.1
CEACAM3-201ENST00000344550 FABP7O15540 132 aa15.7■□□□□ 0.1
CEACAM3-201ENST00000344550 HIST1H1DP16402 221 aaKnown RBP15.7■□□□□ 0.1
CEACAM3-201ENST00000344550 PPIFP30405 207 aaKnown RBP15.7■□□□□ 0.1
CEACAM3-201ENST00000344550 CRIP2P52943 208 aaPredicted RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 125.4 ms