RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 OPRK1P41145 380 aa6.17□□□□□ -1.42
VCAN-202ENST00000342785 MEF2BQ02080 365 aaPredicted RBP6.17□□□□□ -1.42
VCAN-202ENST00000342785 TOMM20LQ6UXN7 152 aa6.17□□□□□ -1.42
VCAN-202ENST00000342785 MOB3BQ86TA1 216 aa6.17□□□□□ -1.42
VCAN-202ENST00000342785 OR10G8Q8NGN5 311 aa6.17□□□□□ -1.42
VCAN-202ENST00000342785 TREM2Q9NZC2 230 aa6.17□□□□□ -1.42
VCAN-202ENST00000342785 WIPI2Q9Y4P8 454 aa6.17□□□□□ -1.42
VCAN-202ENST00000342785 A0A0G2JMM0 328 aa6.16□□□□□ -1.42
VCAN-202ENST00000342785 A0A1W2PPB8 328 aa6.16□□□□□ -1.42
VCAN-202ENST00000342785 A0A1W2PRS3 328 aa6.16□□□□□ -1.42
VCAN-202ENST00000342785 KIR3DP1A8MWS1 328 aa6.16□□□□□ -1.42
VCAN-202ENST00000342785 MYPOPQ86VE0 399 aaPredicted RBP6.16□□□□□ -1.42
VCAN-202ENST00000342785 EP400Q96L91 3159 aa6.16□□□□□ -1.42
VCAN-202ENST00000342785 LDLRAD4O15165 306 aa6.16□□□□□ -1.42
VCAN-202ENST00000342785 TMPRSS2O15393 492 aa6.16□□□□□ -1.42
VCAN-202ENST00000342785 S100A7P31151 101 aa6.16□□□□□ -1.42
VCAN-202ENST00000342785 PMS2P11Q13670 270 aa6.16□□□□□ -1.42
VCAN-202ENST00000342785 DOCK8Q8NF50 2099 aa6.16□□□□□ -1.42
VCAN-202ENST00000342785 TAF15Q92804 592 aaKnown RBP eCLIP6.16□□□□□ -1.42
VCAN-202ENST00000342785 RARRES2Q99969 163 aa6.16□□□□□ -1.42
VCAN-202ENST00000342785 CARHSP1Q9Y2V2 147 aaKnown RBP6.16□□□□□ -1.42
VCAN-202ENST00000342785 CACNA1BQ00975 2339 aa6.16□□□□□ -1.42
VCAN-202ENST00000342785 IGKV1D-8A0A087WSZ0 117 aa6.16□□□□□ -1.42
VCAN-202ENST00000342785 ELOA3CA0A087WX78 387 aaPredicted RBP6.16□□□□□ -1.42
VCAN-202ENST00000342785 H0Y8G0 127 aa6.16□□□□□ -1.42
VCAN-202ENST00000342785 CHEK1O14757 476 aa6.16□□□□□ -1.42
VCAN-202ENST00000342785 CLPSP04118 112 aa6.16□□□□□ -1.42
VCAN-202ENST00000342785 CCL1P22362 96 aa6.16□□□□□ -1.42
VCAN-202ENST00000342785 NPY1RP25929 384 aa6.16□□□□□ -1.42
VCAN-202ENST00000342785 CHRNB4P30926 498 aa6.16□□□□□ -1.42
VCAN-202ENST00000342785 GNG4P50150 75 aa6.16□□□□□ -1.42
VCAN-202ENST00000342785 OR4P4Q8NGL7 312 aa6.16□□□□□ -1.42
VCAN-202ENST00000342785 HIST1H2BAQ96A08 127 aa6.16□□□□□ -1.42
VCAN-202ENST00000342785 DOK5Q9P104 306 aa6.16□□□□□ -1.42
VCAN-202ENST00000342785 KIR2DS2P43631 304 aa6.16□□□□□ -1.42
VCAN-202ENST00000342785 CEBPDP49716 269 aaPredicted RBP6.16□□□□□ -1.42
VCAN-202ENST00000342785 P2RY6Q15077 328 aa6.16□□□□□ -1.42
VCAN-202ENST00000342785 IL22RA2Q969J5 263 aa6.16□□□□□ -1.42
VCAN-202ENST00000342785 RPRMQ9NS64 109 aa6.16□□□□□ -1.42
VCAN-202ENST00000342785 ZFHX2Q9C0A1 2572 aaPredicted RBP6.16□□□□□ -1.42
VCAN-202ENST00000342785 IGSF23A1L1A6 192 aa6.16□□□□□ -1.42
VCAN-202ENST00000342785 KIAA1324LA8MWY0 1029 aaPredicted RBP6.16□□□□□ -1.42
VCAN-202ENST00000342785 KLF7O75840 302 aaPredicted RBP6.16□□□□□ -1.42
VCAN-202ENST00000342785 CLDN14O95500 239 aa6.16□□□□□ -1.42
VCAN-202ENST00000342785 UCP1P25874 307 aa6.16□□□□□ -1.42
VCAN-202ENST00000342785 CD1BP29016 333 aa6.16□□□□□ -1.42
VCAN-202ENST00000342785 MPV17P39210 176 aa6.16□□□□□ -1.42
VCAN-202ENST00000342785 TPPP2P59282 170 aa6.16□□□□□ -1.42
VCAN-202ENST00000342785 ATP1A1-AS1Q5TC04 95 aa6.16□□□□□ -1.42
VCAN-202ENST00000342785 DPPA3Q6W0C5 159 aa6.16□□□□□ -1.42
VCAN-202ENST00000342785 LINC00518Q8N0U6 118 aa6.16□□□□□ -1.42
VCAN-202ENST00000342785 CHRDL1Q9BU40 450 aa6.16□□□□□ -1.42
VCAN-202ENST00000342785 REPIN1Q9BWE0 567 aaKnown RBP6.16□□□□□ -1.42
VCAN-202ENST00000342785 TCF20Q9UGU0 1960 aaKnown RBP6.16□□□□□ -1.42
VCAN-202ENST00000342785 CLN5O75503 358 aa6.16□□□□□ -1.42
VCAN-202ENST00000342785 CSN1S1P47710 185 aa6.16□□□□□ -1.42
VCAN-202ENST00000342785 UBE2L3P68036 154 aaKnown RBP6.16□□□□□ -1.42
VCAN-202ENST00000342785 COL10A1Q03692 680 aa6.16□□□□□ -1.42
VCAN-202ENST00000342785 IQCJQ1A5X6 159 aa6.16□□□□□ -1.42
VCAN-202ENST00000342785 DHRS7BQ6IAN0 325 aaPredicted RBP6.16□□□□□ -1.42
VCAN-202ENST00000342785 PACRGQ96M98 296 aaPredicted RBP6.16□□□□□ -1.42
VCAN-202ENST00000342785 SIGLEC12Q96PQ1 595 aa6.16□□□□□ -1.42
VCAN-202ENST00000342785 HIF1ANQ9NWT6 349 aa6.16□□□□□ -1.42
VCAN-202ENST00000342785 FKBP11Q9NYL4 201 aa6.16□□□□□ -1.42
VCAN-202ENST00000342785 CLCF1Q9UBD9 225 aa6.16□□□□□ -1.42
VCAN-202ENST00000342785 DNASE2O00115 360 aaPredicted RBP6.15□□□□□ -1.42
VCAN-202ENST00000342785 PMCHP20382 165 aa6.15□□□□□ -1.42
VCAN-202ENST00000342785 MPZP25189 248 aa6.15□□□□□ -1.42
VCAN-202ENST00000342785 PSG5Q15238 335 aa6.15□□□□□ -1.42
VCAN-202ENST00000342785 VSTM2AQ8TAG5 236 aa6.15□□□□□ -1.42
VCAN-202ENST00000342785 USB1Q9BQ65 265 aaKnown RBP6.15□□□□□ -1.42
VCAN-202ENST00000342785 LINC00470Q9BZP3 86 aa6.15□□□□□ -1.42
VCAN-202ENST00000342785 ZNF703Q9H7S9 590 aaPredicted RBP6.15□□□□□ -1.42
VCAN-202ENST00000342785 FUT9Q9Y231 359 aa6.15□□□□□ -1.42
VCAN-202ENST00000342785 CACNA1AO00555 2505 aa6.15□□□□□ -1.42
VCAN-202ENST00000342785 TRGC2P03986 189 aa6.15□□□□□ -1.42
VCAN-202ENST00000342785 FBP1P09467 338 aa6.15□□□□□ -1.42
VCAN-202ENST00000342785 PAX5Q02548 391 aa6.15□□□□□ -1.42
VCAN-202ENST00000342785 STPG1Q5TH74 334 aa6.15□□□□□ -1.42
VCAN-202ENST00000342785 LYZL4Q96KX0 146 aa6.15□□□□□ -1.42
VCAN-202ENST00000342785 ZNF71Q9NQZ8 489 aaPredicted RBP6.15□□□□□ -1.42
VCAN-202ENST00000342785 TECRQ9NZ01 308 aaKnown RBP6.15□□□□□ -1.42
VCAN-202ENST00000342785 IGHV3OR15-7A0A075B7D8 119 aa6.15□□□□□ -1.42
VCAN-202ENST00000342785 K7ESF4 209 aa6.15□□□□□ -1.42
VCAN-202ENST00000342785 KLF14Q8TD94 323 aaPredicted RBP6.15□□□□□ -1.42
VCAN-202ENST00000342785 A0A0A6YYD4 124 aa6.15□□□□□ -1.43
VCAN-202ENST00000342785 TRAV38-1A0A0B4J264 116 aa6.15□□□□□ -1.43
VCAN-202ENST00000342785 HPRT1P00492 218 aa6.15□□□□□ -1.43
VCAN-202ENST00000342785 PAX6P26367 422 aa6.15□□□□□ -1.43
VCAN-202ENST00000342785 HOXA6P31267 233 aa6.15□□□□□ -1.43
VCAN-202ENST00000342785 SMIM8Q96KF7 97 aa6.15□□□□□ -1.43
VCAN-202ENST00000342785 TMEM167BQ9NRX6 74 aa6.15□□□□□ -1.43
VCAN-202ENST00000342785 TOX4O94842 621 aa6.15□□□□□ -1.43
VCAN-202ENST00000342785 TMEM11P17152 192 aa6.15□□□□□ -1.43
VCAN-202ENST00000342785 TCL1AP56279 114 aa6.15□□□□□ -1.43
VCAN-202ENST00000342785 CCL8P80075 99 aa6.15□□□□□ -1.43
VCAN-202ENST00000342785 DRAM1Q8N682 238 aa6.15□□□□□ -1.43
VCAN-202ENST00000342785 TCTEX1D1Q8N7M0 179 aa6.15□□□□□ -1.43
VCAN-202ENST00000342785 OR8G5Q8NG78 346 aa6.15□□□□□ -1.43
VCAN-202ENST00000342785 OR5P3Q8WZ94 311 aa6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms