RNA–Protein interactions for RNA: ENST00000341423.9

HMGB1-203, Transcript of high mobility group box 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB1, Length 5,485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1-203ENST00000341423 FAM76BQ5HYJ3 339 aa7.08□□□□□ -1.28
HMGB1-203ENST00000341423 RNF165Q6ZSG1 346 aa7.08□□□□□ -1.28
HMGB1-203ENST00000341423 ZNRF1Q8ND25 227 aa7.08□□□□□ -1.28
HMGB1-203ENST00000341423 BVESQ8NE79 360 aa7.08□□□□□ -1.28
HMGB1-203ENST00000341423 OR1S2Q8NGQ3 325 aa7.08□□□□□ -1.28
HMGB1-203ENST00000341423 RNF2Q99496 336 aa7.08□□□□□ -1.28
HMGB1-203ENST00000341423 MIEN1Q9BRT3 115 aa7.08□□□□□ -1.28
HMGB1-203ENST00000341423 ADGRL4Q9HBW9 690 aa7.08□□□□□ -1.28
HMGB1-203ENST00000341423 IGHV4-61A0A0C4DH41 118 aa7.08□□□□□ -1.28
HMGB1-203ENST00000341423 IGHV4-39P01824 125 aa7.08□□□□□ -1.28
HMGB1-203ENST00000341423 ALDOCP09972 364 aaKnown RBP7.08□□□□□ -1.28
HMGB1-203ENST00000341423 RPL7P18124 248 aaKnown RBP7.08□□□□□ -1.28
HMGB1-203ENST00000341423 RAB4AP20338 218 aa7.08□□□□□ -1.28
HMGB1-203ENST00000341423 BCL3P20749 454 aa7.08□□□□□ -1.28
HMGB1-203ENST00000341423 NKX2-1P43699 371 aaPredicted RBP7.08□□□□□ -1.28
HMGB1-203ENST00000341423 C6orf52Q5T4I8 152 aa7.08□□□□□ -1.28
HMGB1-203ENST00000341423 OR11H1Q8NG94 326 aa7.08□□□□□ -1.28
HMGB1-203ENST00000341423 NRTNQ99748 197 aa7.08□□□□□ -1.28
HMGB1-203ENST00000341423 ZNF2Q9BSG1 426 aaPredicted RBP7.08□□□□□ -1.28
HMGB1-203ENST00000341423 ANXA10Q9UJ72 324 aa7.08□□□□□ -1.28
HMGB1-203ENST00000341423 FNDC1Q4ZHG4 1894 aaPredicted RBP7.08□□□□□ -1.28
HMGB1-203ENST00000341423 OR2T8A6NH00 312 aa7.08□□□□□ -1.28
HMGB1-203ENST00000341423 SOX15O60248 233 aa7.08□□□□□ -1.28
HMGB1-203ENST00000341423 ZNF429Q86V71 674 aa7.08□□□□□ -1.28
HMGB1-203ENST00000341423 RBM45Q8IUH3 476 aaKnown RBP7.08□□□□□ -1.28
HMGB1-203ENST00000341423 RELL2Q8NC24 303 aaPredicted RBP7.08□□□□□ -1.28
HMGB1-203ENST00000341423 ZFAND2BQ8WV99 257 aa7.08□□□□□ -1.28
HMGB1-203ENST00000341423 TNFRSF14Q92956 283 aa7.08□□□□□ -1.28
HMGB1-203ENST00000341423 GSX1Q9H4S2 264 aaPredicted RBP7.08□□□□□ -1.28
HMGB1-203ENST00000341423 QSER1Q2KHR3 1735 aa7.08□□□□□ -1.28
HMGB1-203ENST00000341423 PINLYPA6NC86 204 aa7.07□□□□□ -1.28
HMGB1-203ENST00000341423 C9JCJ5 164 aa7.07□□□□□ -1.28
HMGB1-203ENST00000341423 F5H0A9 414 aaPredicted RBP7.07□□□□□ -1.28
HMGB1-203ENST00000341423 IGHA2P01877 340 aa7.07□□□□□ -1.28
HMGB1-203ENST00000341423 SULT1A3P0DMM9 295 aa7.07□□□□□ -1.28
HMGB1-203ENST00000341423 SULT1A4P0DMN0 295 aa7.07□□□□□ -1.28
HMGB1-203ENST00000341423 ADIPOQQ15848 244 aa7.07□□□□□ -1.28
HMGB1-203ENST00000341423 HCP5Q6MZN7 132 aa7.07□□□□□ -1.28
HMGB1-203ENST00000341423 DUX4L9Q6RFH8 374 aaPredicted RBP7.07□□□□□ -1.28
HMGB1-203ENST00000341423 MTCH1Q9NZJ7 389 aa7.07□□□□□ -1.28
HMGB1-203ENST00000341423 KCNE3Q9Y6H6 103 aa7.07□□□□□ -1.28
HMGB1-203ENST00000341423 MMP9P14780 707 aa7.07□□□□□ -1.28
HMGB1-203ENST00000341423 GABRB1P18505 474 aa7.07□□□□□ -1.28
HMGB1-203ENST00000341423 OR51S1Q8NGJ8 323 aa7.07□□□□□ -1.28
HMGB1-203ENST00000341423 CFHR4Q92496 578 aa7.07□□□□□ -1.28
HMGB1-203ENST00000341423 MOGAT1Q96PD6 335 aa7.07□□□□□ -1.28
HMGB1-203ENST00000341423 S100A14Q9HCY8 104 aa7.07□□□□□ -1.28
HMGB1-203ENST00000341423 KLF4O43474 513 aa7.07□□□□□ -1.28
HMGB1-203ENST00000341423 OR2F2O95006 317 aa7.07□□□□□ -1.28
HMGB1-203ENST00000341423 NXPH3O95157 252 aa7.07□□□□□ -1.28
HMGB1-203ENST00000341423 AKR1C3P42330 323 aa7.07□□□□□ -1.28
HMGB1-203ENST00000341423 CNN1P51911 297 aaKnown RBP7.07□□□□□ -1.28
HMGB1-203ENST00000341423 CCDC58Q4VC31 144 aa7.07□□□□□ -1.28
HMGB1-203ENST00000341423 ETV3LQ6ZN32 361 aa7.07□□□□□ -1.28
HMGB1-203ENST00000341423 NABP1Q96AH0 204 aa7.07□□□□□ -1.28
HMGB1-203ENST00000341423 DTX4Q9Y2E6 619 aa7.07□□□□□ -1.28
HMGB1-203ENST00000341423 OGG1O15527 345 aa7.07□□□□□ -1.28
HMGB1-203ENST00000341423 HSD17B1P14061 328 aa7.07□□□□□ -1.28
HMGB1-203ENST00000341423 MALP21145 153 aa7.07□□□□□ -1.28
HMGB1-203ENST00000341423 CELF2-AS1Q8N7Q2 184 aa7.07□□□□□ -1.28
HMGB1-203ENST00000341423 OR4P4Q8NGL7 312 aa7.07□□□□□ -1.28
HMGB1-203ENST00000341423 C21orf62Q9NYP8 219 aa7.07□□□□□ -1.28
HMGB1-203ENST00000341423 MAB21L2Q9Y586 359 aa7.07□□□□□ -1.28
HMGB1-203ENST00000341423 A0A0D9SG52 128 aa7.07□□□□□ -1.28
HMGB1-203ENST00000341423 TMEM178BH3BS89 294 aa7.07□□□□□ -1.28
HMGB1-203ENST00000341423 MGPP08493 103 aa7.07□□□□□ -1.28
HMGB1-203ENST00000341423 RD3LP0DJH9 198 aa7.07□□□□□ -1.28
HMGB1-203ENST00000341423 DEFB130BP0DP73 79 aa7.07□□□□□ -1.28
HMGB1-203ENST00000341423 DEFB130AP0DP74 79 aa7.07□□□□□ -1.28
HMGB1-203ENST00000341423 CNPY1Q3B7I2 92 aa7.07□□□□□ -1.28
HMGB1-203ENST00000341423 ARHGAP5-AS1Q96IT6 56 aa7.07□□□□□ -1.28
HMGB1-203ENST00000341423 DOK5Q9P104 306 aa7.07□□□□□ -1.28
HMGB1-203ENST00000341423 IGHV3OR16-13A0A075B7E8 117 aa7.06□□□□□ -1.28
HMGB1-203ENST00000341423 IGHV3-74A0A0B4J1X5 117 aa7.06□□□□□ -1.28
HMGB1-203ENST00000341423 SNAP29O95721 258 aa7.06□□□□□ -1.28
HMGB1-203ENST00000341423 PRSS2P07478 247 aa7.06□□□□□ -1.28
HMGB1-203ENST00000341423 H2AFB2P0C5Z0 115 aa7.06□□□□□ -1.28
HMGB1-203ENST00000341423 ACOT6Q3I5F7 207 aaPredicted RBP7.06□□□□□ -1.28
HMGB1-203ENST00000341423 RPL7L1Q6DKI1 246 aaKnown RBP7.06□□□□□ -1.28
HMGB1-203ENST00000341423 FCRL1Q96LA6 429 aa7.06□□□□□ -1.28
HMGB1-203ENST00000341423 CDCA4Q9BXL8 241 aa7.06□□□□□ -1.28
HMGB1-203ENST00000341423 SLC25A5P05141 298 aaKnown RBP7.06□□□□□ -1.28
HMGB1-203ENST00000341423 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.06□□□□□ -1.28
HMGB1-203ENST00000341423 OR14K1Q8NGZ2 314 aa7.06□□□□□ -1.28
HMGB1-203ENST00000341423 RARRES2Q99969 163 aa7.06□□□□□ -1.28
HMGB1-203ENST00000341423 JPT1Q9UK76 154 aa7.06□□□□□ -1.28
HMGB1-203ENST00000341423 TCRBV5S1A1TA0A578 114 aa7.06□□□□□ -1.28
HMGB1-203ENST00000341423 SHISA3A0PJX4 238 aa7.06□□□□□ -1.28
HMGB1-203ENST00000341423 IGLL5B9A064 214 aa7.06□□□□□ -1.28
HMGB1-203ENST00000341423 UBE2MP61081 183 aaKnown RBP7.06□□□□□ -1.28
HMGB1-203ENST00000341423 RHOGP84095 191 aa7.06□□□□□ -1.28
HMGB1-203ENST00000341423 Q6ZN92 141 aa7.06□□□□□ -1.28
HMGB1-203ENST00000341423 DRAXINQ8NBI3 349 aaPredicted RBP7.06□□□□□ -1.28
HMGB1-203ENST00000341423 PAXXQ9BUH6 204 aa7.06□□□□□ -1.28
HMGB1-203ENST00000341423 YTHDF1Q9BYJ9 559 aaKnown RBP7.06□□□□□ -1.28
HMGB1-203ENST00000341423 HIGD1AQ9Y241 93 aa7.06□□□□□ -1.28
HMGB1-203ENST00000341423 A0A0G2JMZ2 1700 aa7.06□□□□□ -1.28
HMGB1-203ENST00000341423 DHRS7CA6NNS2 312 aa7.06□□□□□ -1.28
HMGB1-203ENST00000341423 FCN1O00602 326 aa7.06□□□□□ -1.28
HMGB1-203ENST00000341423 ZNF207O43670 478 aaKnown RBP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms