RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 RAB39BQ96DA2 213 aa14.31□□□□□ -0.12
CLDN4-201ENST00000340958 TOLLIPQ9H0E2 274 aa14.31□□□□□ -0.12
CLDN4-201ENST00000340958 GFOD1Q9NXC2 390 aa14.31□□□□□ -0.12
CLDN4-201ENST00000340958 SHPKQ9UHJ6 478 aa14.31□□□□□ -0.12
CLDN4-201ENST00000340958 FCN3O75636 299 aa14.3□□□□□ -0.12
CLDN4-201ENST00000340958 HOXB5P09067 269 aa14.3□□□□□ -0.12
CLDN4-201ENST00000340958 WNT2P09544 360 aa14.3□□□□□ -0.12
CLDN4-201ENST00000340958 GPR12P47775 334 aa14.3□□□□□ -0.12
CLDN4-201ENST00000340958 LOXL3P58215 753 aa14.3□□□□□ -0.12
CLDN4-201ENST00000340958 TMEM30BQ3MIR4 351 aa14.3□□□□□ -0.12
CLDN4-201ENST00000340958 GSG1LQ6UXU4 331 aa14.3□□□□□ -0.12
CLDN4-201ENST00000340958 OR5M8Q8NGP6 311 aa14.3□□□□□ -0.12
CLDN4-201ENST00000340958 OR2T35Q8NGX2 323 aa14.3□□□□□ -0.12
CLDN4-201ENST00000340958 LEAP2Q969E1 77 aa14.3□□□□□ -0.12
CLDN4-201ENST00000340958 GALNT14Q96FL9 552 aa14.3□□□□□ -0.12
CLDN4-201ENST00000340958 AKAP9Q99996 3911 aa14.3□□□□□ -0.12
CLDN4-201ENST00000340958 RNF212BA8MTL3 300 aa14.29□□□□□ -0.12
CLDN4-201ENST00000340958 IFNA21P01568 189 aa14.29□□□□□ -0.12
CLDN4-201ENST00000340958 IGHV4-39P01824 125 aa14.29□□□□□ -0.12
CLDN4-201ENST00000340958 PDLIM4P50479 330 aa14.29□□□□□ -0.12
CLDN4-201ENST00000340958 H2BFSP57053 126 aa14.29□□□□□ -0.12
CLDN4-201ENST00000340958 RAP2BP61225 183 aa14.29□□□□□ -0.12
CLDN4-201ENST00000340958 DCAF12L2Q5VW00 463 aa14.29□□□□□ -0.12
CLDN4-201ENST00000340958 LGI3Q8N145 548 aa14.29□□□□□ -0.12
CLDN4-201ENST00000340958 DRAM1Q8N682 238 aa14.29□□□□□ -0.12
CLDN4-201ENST00000340958 ZBTB34Q8NCN2 500 aa14.29□□□□□ -0.12
CLDN4-201ENST00000340958 TP53RKQ96S44 253 aa14.29□□□□□ -0.12
CLDN4-201ENST00000340958 RAB18Q9NP72 206 aa14.29□□□□□ -0.12
CLDN4-201ENST00000340958 USF3Q68DE3 2245 aa14.29□□□□□ -0.12
CLDN4-201ENST00000340958 CCDC168Q8NDH2 2452 aa14.29□□□□□ -0.12
CLDN4-201ENST00000340958 ADAP1O75689 374 aa14.29□□□□□ -0.12
CLDN4-201ENST00000340958 GNG10P50151 68 aa14.29□□□□□ -0.12
CLDN4-201ENST00000340958 RAB7AP51149 207 aa14.29□□□□□ -0.12
CLDN4-201ENST00000340958 ATP5J2P56134 94 aa14.29□□□□□ -0.12
CLDN4-201ENST00000340958 SRPXP78539 464 aa14.29□□□□□ -0.12
CLDN4-201ENST00000340958 TMEM187Q14656 261 aa14.29□□□□□ -0.12
CLDN4-201ENST00000340958 ESCO2Q56NI9 601 aa14.29□□□□□ -0.12
CLDN4-201ENST00000340958 WDR25Q64LD2 544 aaPredicted RBP14.29□□□□□ -0.12
CLDN4-201ENST00000340958 ZNF841Q6ZN19 808 aa14.29□□□□□ -0.12
CLDN4-201ENST00000340958 LIAT1Q6ZQX7 453 aa14.29□□□□□ -0.12
CLDN4-201ENST00000340958 ZNF695Q8IW36 515 aa14.29□□□□□ -0.12
CLDN4-201ENST00000340958 ABHD14BQ96IU4 210 aa14.29□□□□□ -0.12
CLDN4-201ENST00000340958 SEC22AQ96IW7 307 aa14.29□□□□□ -0.12
CLDN4-201ENST00000340958 ABHD14AQ9BUJ0 271 aa14.29□□□□□ -0.12
CLDN4-201ENST00000340958 PATZ1Q9HBE1 687 aaKnown RBP14.29□□□□□ -0.12
CLDN4-201ENST00000340958 SERPINE2P07093 398 aa14.28□□□□□ -0.12
CLDN4-201ENST00000340958 F2RP25116 425 aa14.28□□□□□ -0.12
CLDN4-201ENST00000340958 OR10A7Q8NGE5 316 aa14.28□□□□□ -0.12
CLDN4-201ENST00000340958 OR52M1Q8NGK5 317 aa14.28□□□□□ -0.12
CLDN4-201ENST00000340958 SSBP3Q9BWW4 388 aaPredicted RBP14.28□□□□□ -0.12
CLDN4-201ENST00000340958 RANBP3Q9H6Z4 567 aaPredicted RBP14.28□□□□□ -0.12
CLDN4-201ENST00000340958 BARX1Q9HBU1 254 aaPredicted RBP14.28□□□□□ -0.12
CLDN4-201ENST00000340958 COMMD9Q9P000 198 aa14.28□□□□□ -0.12
CLDN4-201ENST00000340958 A0A1W2PPE3 182 aa14.27□□□□□ -0.12
CLDN4-201ENST00000340958 DBX1A6NMT0 343 aa14.27□□□□□ -0.12
CLDN4-201ENST00000340958 MMP23AO75900 390 aa14.27□□□□□ -0.12
CLDN4-201ENST00000340958 IGLV2-14P01704 120 aa14.27□□□□□ -0.12
CLDN4-201ENST00000340958 DNASE1P24855 282 aa14.27□□□□□ -0.12
CLDN4-201ENST00000340958 ERVFRD-1P60508 538 aa14.27□□□□□ -0.12
CLDN4-201ENST00000340958 Q3ZCU0 254 aa14.27□□□□□ -0.12
CLDN4-201ENST00000340958 BTNL3Q6UXE8 466 aa14.27□□□□□ -0.12
CLDN4-201ENST00000340958 HEPN1Q6WQI6 88 aa14.27□□□□□ -0.12
CLDN4-201ENST00000340958 GLYATL2Q8WU03 294 aa14.27□□□□□ -0.12
CLDN4-201ENST00000340958 FAM216AQ8WUB2 273 aa14.27□□□□□ -0.12
CLDN4-201ENST00000340958 ASB13Q8WXK3 278 aa14.27□□□□□ -0.12
CLDN4-201ENST00000340958 LINC00574Q9H8X3 128 aa14.27□□□□□ -0.12
CLDN4-201ENST00000340958 LIN7CQ9NUP9 197 aaKnown RBP14.27□□□□□ -0.12
CLDN4-201ENST00000340958 RPUSD1Q9UJJ7 312 aaKnown RBP14.27□□□□□ -0.12
CLDN4-201ENST00000340958 MYO9AB2RTY4 2548 aa14.27□□□□□ -0.13
CLDN4-201ENST00000340958 CREBBPQ92793 2442 aa14.27□□□□□ -0.13
CLDN4-201ENST00000340958 PPIAL4CA0A0B4J2A2 164 aa14.27□□□□□ -0.13
CLDN4-201ENST00000340958 H0Y980 276 aa14.27□□□□□ -0.13
CLDN4-201ENST00000340958 B3GALNT1O75752 331 aa14.27□□□□□ -0.13
CLDN4-201ENST00000340958 OR2A4O95047 310 aa14.27□□□□□ -0.13
CLDN4-201ENST00000340958 PPIAL4GP0DN37 164 aa14.27□□□□□ -0.13
CLDN4-201ENST00000340958 CATR1Q13166 79 aa14.27□□□□□ -0.13
CLDN4-201ENST00000340958 LY6G6FQ5SQ64 297 aa14.27□□□□□ -0.13
CLDN4-201ENST00000340958 TMEM268Q5VZI3 342 aa14.27□□□□□ -0.13
CLDN4-201ENST00000340958 OR2A7Q96R45 310 aa14.27□□□□□ -0.13
CLDN4-201ENST00000340958 BPESC1Q9GZL8 116 aa14.27□□□□□ -0.13
CLDN4-201ENST00000340958 TMEM222Q9H0R3 208 aa14.27□□□□□ -0.13
CLDN4-201ENST00000340958 OTOGQ6ZRI0 2925 aa14.26□□□□□ -0.13
CLDN4-201ENST00000340958 hCG_1809904A0A1W2PP81 198 aa14.26□□□□□ -0.13
CLDN4-201ENST00000340958 A0A1W2PPE2 198 aa14.26□□□□□ -0.13
CLDN4-201ENST00000340958 A0A1W2PR64 198 aa14.26□□□□□ -0.13
CLDN4-201ENST00000340958 A0A1W2PRV1 198 aa14.26□□□□□ -0.13
CLDN4-201ENST00000340958 HLA-GP17693 338 aa14.26□□□□□ -0.13
CLDN4-201ENST00000340958 LAMTOR1Q6IAA8 161 aa14.26□□□□□ -0.13
CLDN4-201ENST00000340958 CLEC2AQ6UVW9 174 aa14.26□□□□□ -0.13
CLDN4-201ENST00000340958 LYG1Q8N1E2 194 aa14.26□□□□□ -0.13
CLDN4-201ENST00000340958 IGFBPL1Q8WX77 278 aa14.26□□□□□ -0.13
CLDN4-201ENST00000340958 FAM168AQ92567 244 aa14.26□□□□□ -0.13
CLDN4-201ENST00000340958 PERPQ96FX8 193 aa14.26□□□□□ -0.13
CLDN4-201ENST00000340958 AGMATQ9BSE5 352 aa14.26□□□□□ -0.13
CLDN4-201ENST00000340958 PIMREGQ9BSJ6 248 aa14.26□□□□□ -0.13
CLDN4-201ENST00000340958 SDHAF2Q9NX18 166 aa14.26□□□□□ -0.13
CLDN4-201ENST00000340958 PIPOXQ9P0Z9 390 aa14.26□□□□□ -0.13
CLDN4-201ENST00000340958 ONECUT1Q9UBC0 465 aa14.26□□□□□ -0.13
CLDN4-201ENST00000340958 LOC105371242A0A075B767 164 aa14.25□□□□□ -0.13
CLDN4-201ENST00000340958 ZNF134P52741 427 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms