RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 OR6C3Q9NZP0 311 aa18.59■□□□□ 0.57
PDLIM2-203ENST00000339162 PPIAL4EA0A075B759 164 aa18.59■□□□□ 0.57
PDLIM2-203ENST00000339162 PPIAL4DF5H284 164 aa18.59■□□□□ 0.57
PDLIM2-203ENST00000339162 SIGLEC5O15389 551 aa18.59■□□□□ 0.57
PDLIM2-203ENST00000339162 RAMP3O60896 148 aa18.59■□□□□ 0.57
PDLIM2-203ENST00000339162 PPIAL4FP0DN26 164 aa18.59■□□□□ 0.57
PDLIM2-203ENST00000339162 GNLYP22749 145 aa18.59■□□□□ 0.57
PDLIM2-203ENST00000339162 LOXL3P58215 753 aa18.59■□□□□ 0.57
PDLIM2-203ENST00000339162 POLR2GP62487 172 aaKnown RBP eCLIP18.59■□□□□ 0.57
PDLIM2-203ENST00000339162 EFNB3Q15768 340 aa18.59■□□□□ 0.57
PDLIM2-203ENST00000339162 C17orf58Q2M2W7 97 aa18.59■□□□□ 0.57
PDLIM2-203ENST00000339162 TCF23Q7RTU1 214 aa18.59■□□□□ 0.57
PDLIM2-203ENST00000339162 RNASE11Q8TAA1 199 aaKnown RBP18.59■□□□□ 0.57
PDLIM2-203ENST00000339162 LIN7CQ9NUP9 197 aaKnown RBP18.59■□□□□ 0.57
PDLIM2-203ENST00000339162 PPIAL4AQ9Y536 164 aa18.59■□□□□ 0.57
PDLIM2-203ENST00000339162 LGALS8O00214 317 aa18.58■□□□□ 0.57
PDLIM2-203ENST00000339162 ZG16O60844 167 aa18.58■□□□□ 0.57
PDLIM2-203ENST00000339162 NDUFB7P17568 137 aa18.58■□□□□ 0.57
PDLIM2-203ENST00000339162 NKX2-1P43699 371 aaPredicted RBP18.58■□□□□ 0.57
PDLIM2-203ENST00000339162 MORN2Q502X0 79 aa18.58■□□□□ 0.57
PDLIM2-203ENST00000339162 IL22RA2Q969J5 263 aa18.58■□□□□ 0.57
PDLIM2-203ENST00000339162 GPR146Q96CH1 333 aa18.58■□□□□ 0.57
PDLIM2-203ENST00000339162 SMIM3Q9BZL3 60 aa18.58■□□□□ 0.57
PDLIM2-203ENST00000339162 SDHAF2Q9NX18 166 aa18.58■□□□□ 0.57
PDLIM2-203ENST00000339162 USF3Q68DE3 2245 aa18.58■□□□□ 0.57
PDLIM2-203ENST00000339162 TRAV38-1A0A0B4J264 116 aa18.58■□□□□ 0.56
PDLIM2-203ENST00000339162 TMEM8BA6NDV4 472 aa18.58■□□□□ 0.56
PDLIM2-203ENST00000339162 E5RGE8 158 aa18.58■□□□□ 0.56
PDLIM2-203ENST00000339162 CLDN14O95500 239 aa18.58■□□□□ 0.56
PDLIM2-203ENST00000339162 NMBP08949 121 aa18.58■□□□□ 0.56
PDLIM2-203ENST00000339162 ZNF134P52741 427 aa18.58■□□□□ 0.56
PDLIM2-203ENST00000339162 Q3ZCU0 254 aa18.58■□□□□ 0.56
PDLIM2-203ENST00000339162 ZNF672Q499Z4 452 aaPredicted RBP18.58■□□□□ 0.56
PDLIM2-203ENST00000339162 C1orf87Q8N0U7 546 aa18.58■□□□□ 0.56
PDLIM2-203ENST00000339162 DMBX1Q8NFW5 382 aa18.58■□□□□ 0.56
PDLIM2-203ENST00000339162 SPIN2AQ99865 258 aa18.58■□□□□ 0.56
PDLIM2-203ENST00000339162 SPIN2BQ9BPZ2 258 aa18.58■□□□□ 0.56
PDLIM2-203ENST00000339162 NSG2Q9Y328 171 aa18.58■□□□□ 0.56
PDLIM2-203ENST00000339162 POMT1Q9Y6A1 747 aa18.58■□□□□ 0.56
PDLIM2-203ENST00000339162 CFAP46Q8IYW2 2715 aa18.58■□□□□ 0.56
PDLIM2-203ENST00000339162 DCHS2Q6V1P9 2916 aa18.57■□□□□ 0.56
PDLIM2-203ENST00000339162 DUXBA0A1W2PPF3 345 aa18.57■□□□□ 0.56
PDLIM2-203ENST00000339162 CGB3P0DN86 165 aa18.57■□□□□ 0.56
PDLIM2-203ENST00000339162 CGB7P0DN87 165 aa18.57■□□□□ 0.56
PDLIM2-203ENST00000339162 LOXP28300 417 aaPredicted RBP18.57■□□□□ 0.56
PDLIM2-203ENST00000339162 Q6ZRM9 215 aa18.57■□□□□ 0.56
PDLIM2-203ENST00000339162 BSCL2Q96G97 398 aaPredicted RBP18.57■□□□□ 0.56
PDLIM2-203ENST00000339162 TMA7Q9Y2S6 64 aaKnown RBP18.57■□□□□ 0.56
PDLIM2-203ENST00000339162 HRNRQ86YZ3 2850 aaPredicted RBP18.57■□□□□ 0.56
PDLIM2-203ENST00000339162 A0A1W2PPE3 182 aa18.57■□□□□ 0.56
PDLIM2-203ENST00000339162 LYNX1G3V0Z9 82 aa18.57■□□□□ 0.56
PDLIM2-203ENST00000339162 TEX46H3BTG2 121 aa18.57■□□□□ 0.56
PDLIM2-203ENST00000339162 SHOXO15266 292 aa18.57■□□□□ 0.56
PDLIM2-203ENST00000339162 FCN3O75636 299 aa18.57■□□□□ 0.56
PDLIM2-203ENST00000339162 IGKV1-5P01602 117 aa18.57■□□□□ 0.56
PDLIM2-203ENST00000339162 LYNX1P0DP58 116 aa18.57■□□□□ 0.56
PDLIM2-203ENST00000339162 AKR1C2P52895 323 aa18.57■□□□□ 0.56
PDLIM2-203ENST00000339162 EIF4EBP1Q13541 118 aaPredicted RBP18.57■□□□□ 0.56
PDLIM2-203ENST00000339162 SWI5Q1ZZU3 235 aa18.57■□□□□ 0.56
PDLIM2-203ENST00000339162 LYPD2Q6UXB3 125 aa18.57■□□□□ 0.56
PDLIM2-203ENST00000339162 CXorf58Q96LI9 332 aa18.57■□□□□ 0.56
PDLIM2-203ENST00000339162 JPT1Q9UK76 154 aa18.57■□□□□ 0.56
PDLIM2-203ENST00000339162 IGSF10Q6WRI0 2623 aa18.56■□□□□ 0.56
PDLIM2-203ENST00000339162 TRGV10A0A0A0MS01 117 aa18.56■□□□□ 0.56
PDLIM2-203ENST00000339162 F2RL2O00254 374 aa18.56■□□□□ 0.56
PDLIM2-203ENST00000339162 WNT2P09544 360 aa18.56■□□□□ 0.56
PDLIM2-203ENST00000339162 ERVFRD-1P60508 538 aa18.56■□□□□ 0.56
PDLIM2-203ENST00000339162 ZNF816Q0VGE8 651 aaPredicted RBP18.56■□□□□ 0.56
PDLIM2-203ENST00000339162 FAM234AQ9H0X4 552 aa18.56■□□□□ 0.56
PDLIM2-203ENST00000339162 RALYQ9UKM9 306 aaKnown RBP18.56■□□□□ 0.56
PDLIM2-203ENST00000339162 DSCAML1Q8TD84 2053 aa18.56■□□□□ 0.56
PDLIM2-203ENST00000339162 NKX6-3A6NJ46 265 aa18.55■□□□□ 0.56
PDLIM2-203ENST00000339162 SSSCA1O60232 199 aa18.55■□□□□ 0.56
PDLIM2-203ENST00000339162 LPAR6P43657 344 aa18.55■□□□□ 0.56
PDLIM2-203ENST00000339162 TMEM33P57088 247 aa18.55■□□□□ 0.56
PDLIM2-203ENST00000339162 BRWD1-AS2P59051 145 aa18.55■□□□□ 0.56
PDLIM2-203ENST00000339162 TCTEX1D2Q8WW35 142 aa18.55■□□□□ 0.56
PDLIM2-203ENST00000339162 SLC25A10Q9UBX3 287 aaPredicted RBP18.55■□□□□ 0.56
PDLIM2-203ENST00000339162 IGHV1-69-2A0A0G2JMI3 117 aa18.55■□□□□ 0.56
PDLIM2-203ENST00000339162 KBTBD11-OT1A0A1B0GTJ5 212 aa18.55■□□□□ 0.56
PDLIM2-203ENST00000339162 CLEC18AA5D8T8 446 aa18.55■□□□□ 0.56
PDLIM2-203ENST00000339162 LINC00473A8K010 186 aa18.55■□□□□ 0.56
PDLIM2-203ENST00000339162 C17orf98A8MV24 154 aa18.55■□□□□ 0.56
PDLIM2-203ENST00000339162 SLC31A2O15432 143 aa18.55■□□□□ 0.56
PDLIM2-203ENST00000339162 NFYBP25208 207 aa18.55■□□□□ 0.56
PDLIM2-203ENST00000339162 RPL7L1Q6DKI1 246 aaKnown RBP18.55■□□□□ 0.56
PDLIM2-203ENST00000339162 CLEC18CQ8NCF0 446 aa18.55■□□□□ 0.56
PDLIM2-203ENST00000339162 ZBTB34Q8NCN2 500 aa18.55■□□□□ 0.56
PDLIM2-203ENST00000339162 SUN5Q8TC36 379 aa18.55■□□□□ 0.56
PDLIM2-203ENST00000339162 CLN8Q9UBY8 286 aa18.55■□□□□ 0.56
PDLIM2-203ENST00000339162 FBXL17Q9UF56 701 aa18.55■□□□□ 0.56
PDLIM2-203ENST00000339162 RNF212BA8MTL3 300 aa18.54■□□□□ 0.56
PDLIM2-203ENST00000339162 PROP1O75360 226 aa18.54■□□□□ 0.56
PDLIM2-203ENST00000339162 MMP23AO75900 390 aa18.54■□□□□ 0.56
PDLIM2-203ENST00000339162 CLDN1O95832 211 aa18.54■□□□□ 0.56
PDLIM2-203ENST00000339162 EDARADDQ8WWZ3 215 aa18.54■□□□□ 0.56
PDLIM2-203ENST00000339162 ZFP57Q9NU63 452 aa18.54■□□□□ 0.56
PDLIM2-203ENST00000339162 YPEL1O60688 119 aa18.54■□□□□ 0.56
PDLIM2-203ENST00000339162 GPR12P47775 334 aa18.54■□□□□ 0.56
PDLIM2-203ENST00000339162 COMMD7Q86VX2 200 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms