RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 CCDC90BQ9GZT6 254 aa10.41□□□□□ -0.74
NUDCD3-201ENST00000338427 C11orf54Q9H0W9 315 aaPredicted RBP10.41□□□□□ -0.74
NUDCD3-201ENST00000338427 ALX4Q9H161 411 aaPredicted RBP10.41□□□□□ -0.74
NUDCD3-201ENST00000338427 OR51J1Q9H342 316 aa10.41□□□□□ -0.74
NUDCD3-201ENST00000338427 GAB2Q9UQC2 676 aa10.41□□□□□ -0.74
NUDCD3-201ENST00000338427 FOXI3A8MTJ6 420 aaPredicted RBP10.4□□□□□ -0.74
NUDCD3-201ENST00000338427 NBR2O15453 112 aa10.4□□□□□ -0.74
NUDCD3-201ENST00000338427 RRP9O43818 475 aaKnown RBP10.4□□□□□ -0.74
NUDCD3-201ENST00000338427 EGR2P11161 476 aaPredicted RBP10.4□□□□□ -0.74
NUDCD3-201ENST00000338427 CEACAM6P40199 344 aa10.4□□□□□ -0.74
NUDCD3-201ENST00000338427 VEGFCP49767 419 aa10.4□□□□□ -0.74
NUDCD3-201ENST00000338427 GNB1P62873 340 aa10.4□□□□□ -0.74
NUDCD3-201ENST00000338427 DGCR2P98153 550 aa10.4□□□□□ -0.74
NUDCD3-201ENST00000338427 NDPQ00604 133 aa10.4□□□□□ -0.74
NUDCD3-201ENST00000338427 FABP5Q01469 135 aa10.4□□□□□ -0.74
NUDCD3-201ENST00000338427 C5orf64Q2M2E5 130 aa10.4□□□□□ -0.74
NUDCD3-201ENST00000338427 C2orf76Q3KRA6 126 aa10.4□□□□□ -0.74
NUDCD3-201ENST00000338427 FAM89BQ8N5H3 189 aa10.4□□□□□ -0.74
NUDCD3-201ENST00000338427 ZNF491Q8N8L2 437 aa10.4□□□□□ -0.74
NUDCD3-201ENST00000338427 DRAXINQ8NBI3 349 aaPredicted RBP10.4□□□□□ -0.74
NUDCD3-201ENST00000338427 OR2AK2Q8NG84 335 aa10.4□□□□□ -0.74
NUDCD3-201ENST00000338427 DPF1Q92782 380 aa10.4□□□□□ -0.74
NUDCD3-201ENST00000338427 UFD1Q92890 307 aa10.4□□□□□ -0.74
NUDCD3-201ENST00000338427 ARHGAP5-AS1Q96IT6 56 aa10.4□□□□□ -0.74
NUDCD3-201ENST00000338427 MCRIP2Q9BUT9 160 aaKnown RBP10.4□□□□□ -0.74
NUDCD3-201ENST00000338427 GON7Q9BXV9 100 aa10.4□□□□□ -0.74
NUDCD3-201ENST00000338427 PLGRKTQ9HBL7 147 aa10.4□□□□□ -0.74
NUDCD3-201ENST00000338427 ABRACLQ9P1F3 81 aa10.4□□□□□ -0.74
NUDCD3-201ENST00000338427 LRRC42Q9Y546 428 aa10.4□□□□□ -0.74
NUDCD3-201ENST00000338427 A3GALT2U3KPV4 340 aa10.4□□□□□ -0.74
NUDCD3-201ENST00000338427 TRAV41A0A0B4J266 112 aa10.39□□□□□ -0.75
NUDCD3-201ENST00000338427 IGKV1-6A0A0C4DH72 117 aa10.39□□□□□ -0.75
NUDCD3-201ENST00000338427 SOX15O60248 233 aa10.39□□□□□ -0.75
NUDCD3-201ENST00000338427 RGS11O94810 467 aa10.39□□□□□ -0.75
NUDCD3-201ENST00000338427 BPNT1O95861 308 aa10.39□□□□□ -0.75
NUDCD3-201ENST00000338427 CD3GP09693 182 aa10.39□□□□□ -0.75
NUDCD3-201ENST00000338427 SLC6A1P30531 599 aa10.39□□□□□ -0.75
NUDCD3-201ENST00000338427 ECI1P42126 302 aa10.39□□□□□ -0.75
NUDCD3-201ENST00000338427 RAB9AP51151 201 aa10.39□□□□□ -0.75
NUDCD3-201ENST00000338427 CD69Q07108 199 aa10.39□□□□□ -0.75
NUDCD3-201ENST00000338427 PLAC9Q5JTB6 97 aa10.39□□□□□ -0.75
NUDCD3-201ENST00000338427 LY6G6FQ5SQ64 297 aa10.39□□□□□ -0.75
NUDCD3-201ENST00000338427 HES5Q5TA89 166 aa10.39□□□□□ -0.75
NUDCD3-201ENST00000338427 ZNF554Q86TJ5 538 aa10.39□□□□□ -0.75
NUDCD3-201ENST00000338427 NPBQ8NG41 125 aa10.39□□□□□ -0.75
NUDCD3-201ENST00000338427 OR6M1Q8NGM8 313 aa10.39□□□□□ -0.75
NUDCD3-201ENST00000338427 OR1N2Q8NGR9 330 aa10.39□□□□□ -0.75
NUDCD3-201ENST00000338427 OR8U1Q8NH10 309 aa10.39□□□□□ -0.75
NUDCD3-201ENST00000338427 THRSPQ92748 146 aa10.39□□□□□ -0.75
NUDCD3-201ENST00000338427 AGMATQ9BSE5 352 aa10.39□□□□□ -0.75
NUDCD3-201ENST00000338427 PECRQ9BY49 303 aa10.39□□□□□ -0.75
NUDCD3-201ENST00000338427 VCXQ9H320 206 aa10.39□□□□□ -0.75
NUDCD3-201ENST00000338427 SLC23A1Q9UHI7 598 aa10.39□□□□□ -0.75
NUDCD3-201ENST00000338427 TPRKBQ9Y3C4 175 aa10.39□□□□□ -0.75
NUDCD3-201ENST00000338427 KMT2CQ8NEZ4 4911 aaKnown RBP10.39□□□□□ -0.75
NUDCD3-201ENST00000338427 SHISA3A0PJX4 238 aa10.38□□□□□ -0.75
NUDCD3-201ENST00000338427 SEC14L6B5MCN3 397 aa10.38□□□□□ -0.75
NUDCD3-201ENST00000338427 I3L521 148 aa10.38□□□□□ -0.75
NUDCD3-201ENST00000338427 SLC17A2O00624 439 aa10.38□□□□□ -0.75
NUDCD3-201ENST00000338427 RGS10O43665 173 aa10.38□□□□□ -0.75
NUDCD3-201ENST00000338427 IGLV1-40P01703 118 aa10.38□□□□□ -0.75
NUDCD3-201ENST00000338427 HLA-DRB1P01911 266 aa10.38□□□□□ -0.75
NUDCD3-201ENST00000338427 ARSBP15848 533 aa10.38□□□□□ -0.75
NUDCD3-201ENST00000338427 CX3CL1P78423 397 aa10.38□□□□□ -0.75
NUDCD3-201ENST00000338427 ECSCRQ19T08 205 aa10.38□□□□□ -0.75
NUDCD3-201ENST00000338427 ZNF260Q3ZCT1 412 aa10.38□□□□□ -0.75
NUDCD3-201ENST00000338427 TMEM65Q6PI78 240 aa10.38□□□□□ -0.75
NUDCD3-201ENST00000338427 OR5M8Q8NGP6 311 aa10.38□□□□□ -0.75
NUDCD3-201ENST00000338427 MYOZ3Q8TDC0 251 aa10.38□□□□□ -0.75
NUDCD3-201ENST00000338427 C4orf3Q8WVX3 66 aa10.38□□□□□ -0.75
NUDCD3-201ENST00000338427 ASCL2Q99929 193 aa10.38□□□□□ -0.75
NUDCD3-201ENST00000338427 FAM103A1Q9BTL3 118 aaKnown RBP10.38□□□□□ -0.75
NUDCD3-201ENST00000338427 Q9N2K0 584 aa10.38□□□□□ -0.75
NUDCD3-201ENST00000338427 STEAP1Q9UHE8 339 aa10.38□□□□□ -0.75
NUDCD3-201ENST00000338427 LSM4Q9Y4Z0 139 aaKnown RBP10.38□□□□□ -0.75
NUDCD3-201ENST00000338427 HUWE1Q7Z6Z7 4374 aaKnown RBP10.37□□□□□ -0.75
NUDCD3-201ENST00000338427 H0YJW9 148 aa10.37□□□□□ -0.75
NUDCD3-201ENST00000338427 RRHO14718 337 aa10.37□□□□□ -0.75
NUDCD3-201ENST00000338427 RAB29O14966 203 aa10.37□□□□□ -0.75
NUDCD3-201ENST00000338427 NDUFA3O95167 84 aa10.37□□□□□ -0.75
NUDCD3-201ENST00000338427 GSTP1P09211 210 aaKnown RBP10.37□□□□□ -0.75
NUDCD3-201ENST00000338427 CPEP16870 476 aa10.37□□□□□ -0.75
NUDCD3-201ENST00000338427 CRHBPP24387 322 aa10.37□□□□□ -0.75
NUDCD3-201ENST00000338427 CALRP27797 417 aaKnown RBP10.37□□□□□ -0.75
NUDCD3-201ENST00000338427 RAB11BQ15907 218 aa10.37□□□□□ -0.75
NUDCD3-201ENST00000338427 MOGAT2Q3SYC2 334 aa10.37□□□□□ -0.75
NUDCD3-201ENST00000338427 MINDY2Q8NBR6 621 aa10.37□□□□□ -0.75
NUDCD3-201ENST00000338427 DCUN1D4Q92564 292 aa10.37□□□□□ -0.75
NUDCD3-201ENST00000338427 FAM3DQ96BQ1 224 aa10.37□□□□□ -0.75
NUDCD3-201ENST00000338427 MS4A10Q96PG2 267 aa10.37□□□□□ -0.75
NUDCD3-201ENST00000338427 MGLLQ99685 303 aa10.37□□□□□ -0.75
NUDCD3-201ENST00000338427 B9D2Q9BPU9 175 aa10.37□□□□□ -0.75
NUDCD3-201ENST00000338427 URM1Q9BTM9 101 aaKnown RBP10.37□□□□□ -0.75
NUDCD3-201ENST00000338427 GPR61Q9BZJ8 451 aa10.37□□□□□ -0.75
NUDCD3-201ENST00000338427 PIPOXQ9P0Z9 390 aa10.37□□□□□ -0.75
NUDCD3-201ENST00000338427 KIAA1456Q9P272 454 aa10.37□□□□□ -0.75
NUDCD3-201ENST00000338427 KCNK7Q9Y2U2 307 aa10.37□□□□□ -0.75
NUDCD3-201ENST00000338427 NUBP2Q9Y5Y2 271 aa10.37□□□□□ -0.75
NUDCD3-201ENST00000338427 TRBV6-6A0A0A6YYG2 114 aa10.36□□□□□ -0.75
NUDCD3-201ENST00000338427 A0A0B4J203 849 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms