RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 C8orf46Q8TAG6 207 aa12.11□□□□□ -0.47
CDK5RAP3-201ENST00000338399 GLYATL2Q8WU03 294 aa12.11□□□□□ -0.47
CDK5RAP3-201ENST00000338399 ABHD14AQ9BUJ0 271 aa12.11□□□□□ -0.47
CDK5RAP3-201ENST00000338399 SUCNR1Q9BXA5 334 aa12.11□□□□□ -0.47
CDK5RAP3-201ENST00000338399 SHPKQ9UHJ6 478 aa12.11□□□□□ -0.47
CDK5RAP3-201ENST00000338399 H2BFSP57053 126 aa12.1□□□□□ -0.47
CDK5RAP3-201ENST00000338399 LY6G6FQ5SQ64 297 aa12.1□□□□□ -0.47
CDK5RAP3-201ENST00000338399 DCAF12L2Q5VW00 463 aa12.1□□□□□ -0.47
CDK5RAP3-201ENST00000338399 CLEC2AQ6UVW9 174 aa12.1□□□□□ -0.47
CDK5RAP3-201ENST00000338399 C11orf42Q8N5U0 333 aa12.1□□□□□ -0.47
CDK5RAP3-201ENST00000338399 ZNF439Q8NDP4 499 aa12.1□□□□□ -0.47
CDK5RAP3-201ENST00000338399 WDR89Q96FK6 387 aaPredicted RBP12.1□□□□□ -0.47
CDK5RAP3-201ENST00000338399 PIMREGQ9BSJ6 248 aa12.1□□□□□ -0.47
CDK5RAP3-201ENST00000338399 SDHAF2Q9NX18 166 aa12.1□□□□□ -0.47
CDK5RAP3-201ENST00000338399 LOC105371242A0A075B767 164 aa12.1□□□□□ -0.47
CDK5RAP3-201ENST00000338399 A0A1W2PPH5 198 aa12.1□□□□□ -0.47
CDK5RAP3-201ENST00000338399 C17orf98A8MV24 154 aa12.1□□□□□ -0.47
CDK5RAP3-201ENST00000338399 SMLR1H3BR10 107 aa12.1□□□□□ -0.47
CDK5RAP3-201ENST00000338399 ITGB1BP1O14713 200 aa12.1□□□□□ -0.47
CDK5RAP3-201ENST00000338399 ADAP1O75689 374 aa12.1□□□□□ -0.47
CDK5RAP3-201ENST00000338399 PAX1P15863 534 aa12.1□□□□□ -0.47
CDK5RAP3-201ENST00000338399 F2RP25116 425 aa12.1□□□□□ -0.47
CDK5RAP3-201ENST00000338399 GPR12P47775 334 aa12.1□□□□□ -0.47
CDK5RAP3-201ENST00000338399 BTNL3Q6UXE8 466 aa12.1□□□□□ -0.47
CDK5RAP3-201ENST00000338399 LIAT1Q6ZQX7 453 aa12.1□□□□□ -0.47
CDK5RAP3-201ENST00000338399 TCTE3Q8IZS6 198 aa12.1□□□□□ -0.47
CDK5RAP3-201ENST00000338399 ZBTB34Q8NCN2 500 aa12.1□□□□□ -0.47
CDK5RAP3-201ENST00000338399 LY6G5BQ8NDX9 201 aa12.1□□□□□ -0.47
CDK5RAP3-201ENST00000338399 OR5M8Q8NGP6 311 aa12.1□□□□□ -0.47
CDK5RAP3-201ENST00000338399 C10orf105Q8TEF2 133 aa12.1□□□□□ -0.47
CDK5RAP3-201ENST00000338399 MSI2Q96DH6 328 aaKnown RBP12.1□□□□□ -0.47
CDK5RAP3-201ENST00000338399 GSX2Q9BZM3 304 aa12.1□□□□□ -0.47
CDK5RAP3-201ENST00000338399 IFI27L2Q9H2X8 130 aa12.1□□□□□ -0.47
CDK5RAP3-201ENST00000338399 PIPOXQ9P0Z9 390 aa12.1□□□□□ -0.47
CDK5RAP3-201ENST00000338399 FBN2P35556 2912 aa12.09□□□□□ -0.47
CDK5RAP3-201ENST00000338399 FAM25EA8MYX2 175 aa12.09□□□□□ -0.47
CDK5RAP3-201ENST00000338399 HOXB5P09067 269 aa12.09□□□□□ -0.47
CDK5RAP3-201ENST00000338399 IGHV1-8P0DP01 117 aa12.09□□□□□ -0.47
CDK5RAP3-201ENST00000338399 ZNF16P17020 682 aaPredicted RBP12.09□□□□□ -0.47
CDK5RAP3-201ENST00000338399 RAB7AP51149 207 aa12.09□□□□□ -0.47
CDK5RAP3-201ENST00000338399 LMO4P61968 165 aa12.09□□□□□ -0.47
CDK5RAP3-201ENST00000338399 Q3ZCU0 254 aa12.09□□□□□ -0.47
CDK5RAP3-201ENST00000338399 FAM216AQ8WUB2 273 aa12.09□□□□□ -0.47
CDK5RAP3-201ENST00000338399 TMEM222Q9H0R3 208 aa12.09□□□□□ -0.47
CDK5RAP3-201ENST00000338399 H0Y980 276 aa12.08□□□□□ -0.48
CDK5RAP3-201ENST00000338399 NDUFS8O00217 210 aa12.08□□□□□ -0.48
CDK5RAP3-201ENST00000338399 OR2A4O95047 310 aa12.08□□□□□ -0.48
CDK5RAP3-201ENST00000338399 LIPFP07098 398 aa12.08□□□□□ -0.48
CDK5RAP3-201ENST00000338399 HLA-GP17693 338 aa12.08□□□□□ -0.48
CDK5RAP3-201ENST00000338399 ZFP36P26651 326 aaKnown RBP12.08□□□□□ -0.48
CDK5RAP3-201ENST00000338399 EIF4EBP1Q13541 118 aaPredicted RBP12.08□□□□□ -0.48
CDK5RAP3-201ENST00000338399 MSMO1Q15800 293 aa12.08□□□□□ -0.48
CDK5RAP3-201ENST00000338399 LHFPL5Q8TAF8 219 aa12.08□□□□□ -0.48
CDK5RAP3-201ENST00000338399 RAB39BQ96DA2 213 aa12.08□□□□□ -0.48
CDK5RAP3-201ENST00000338399 OR2A7Q96R45 310 aa12.08□□□□□ -0.48
CDK5RAP3-201ENST00000338399 METTL8Q9H825 291 aaKnown RBP12.08□□□□□ -0.48
CDK5RAP3-201ENST00000338399 ZNRD1Q9P1U0 126 aa12.08□□□□□ -0.48
CDK5RAP3-201ENST00000338399 ONECUT1Q9UBC0 465 aa12.08□□□□□ -0.48
CDK5RAP3-201ENST00000338399 HELZ2Q9BYK8 2649 aaKnown RBP12.08□□□□□ -0.48
CDK5RAP3-201ENST00000338399 TACC2O95359 2948 aa12.08□□□□□ -0.48
CDK5RAP3-201ENST00000338399 C13orf42A0A1B0GVH6 325 aa12.08□□□□□ -0.48
CDK5RAP3-201ENST00000338399 KIAA1324LA8MWY0 1029 aaPredicted RBP12.08□□□□□ -0.48
CDK5RAP3-201ENST00000338399 PROP1O75360 226 aa12.08□□□□□ -0.48
CDK5RAP3-201ENST00000338399 GIPP09681 153 aaPredicted RBP12.08□□□□□ -0.48
CDK5RAP3-201ENST00000338399 DLX1P56177 255 aa12.08□□□□□ -0.48
CDK5RAP3-201ENST00000338399 RPL30P62888 115 aaKnown RBP12.08□□□□□ -0.48
CDK5RAP3-201ENST00000338399 RPL39P5Q59GN2 51 aa12.08□□□□□ -0.48
CDK5RAP3-201ENST00000338399 SLC25A48Q6ZT89 311 aaKnown RBP12.08□□□□□ -0.48
CDK5RAP3-201ENST00000338399 LGI3Q8N145 548 aa12.08□□□□□ -0.48
CDK5RAP3-201ENST00000338399 LYG1Q8N1E2 194 aa12.08□□□□□ -0.48
CDK5RAP3-201ENST00000338399 SEC22AQ96IW7 307 aa12.08□□□□□ -0.48
CDK5RAP3-201ENST00000338399 RAB18Q9NP72 206 aa12.08□□□□□ -0.48
CDK5RAP3-201ENST00000338399 SESN1Q9Y6P5 492 aa12.08□□□□□ -0.48
CDK5RAP3-201ENST00000338399 IGHV4-30-2A0A087WSY4 118 aa12.07□□□□□ -0.48
CDK5RAP3-201ENST00000338399 C5orf51A6NDU8 294 aa12.07□□□□□ -0.48
CDK5RAP3-201ENST00000338399 VWC2LB2RUY7 222 aa12.07□□□□□ -0.48
CDK5RAP3-201ENST00000338399 UCP1P25874 307 aa12.07□□□□□ -0.48
CDK5RAP3-201ENST00000338399 LINC00205P59089 165 aa12.07□□□□□ -0.48
CDK5RAP3-201ENST00000338399 LCN2P80188 198 aa12.07□□□□□ -0.48
CDK5RAP3-201ENST00000338399 ZFP69Q49AA0 526 aa12.07□□□□□ -0.48
CDK5RAP3-201ENST00000338399 C1orf229Q6ZS94 237 aaPredicted RBP12.07□□□□□ -0.48
CDK5RAP3-201ENST00000338399 ODF3L1Q8IXM7 274 aa12.07□□□□□ -0.48
CDK5RAP3-201ENST00000338399 LRTM2Q8N967 370 aa12.07□□□□□ -0.48
CDK5RAP3-201ENST00000338399 PDCD10Q9BUL8 212 aa12.07□□□□□ -0.48
CDK5RAP3-201ENST00000338399 CELSR2Q9HCU4 2923 aa12.07□□□□□ -0.48
CDK5RAP3-201ENST00000338399 RNF212BA8MTL3 300 aa12.06□□□□□ -0.48
CDK5RAP3-201ENST00000338399 MPTX1A8MV57 137 aa12.06□□□□□ -0.48
CDK5RAP3-201ENST00000338399 RAB29O14966 203 aa12.06□□□□□ -0.48
CDK5RAP3-201ENST00000338399 RAP2BP61225 183 aa12.06□□□□□ -0.48
CDK5RAP3-201ENST00000338399 ARF6P62330 175 aa12.06□□□□□ -0.48
CDK5RAP3-201ENST00000338399 TMEM268Q5VZI3 342 aa12.06□□□□□ -0.48
CDK5RAP3-201ENST00000338399 GSG1LQ6UXU4 331 aa12.06□□□□□ -0.48
CDK5RAP3-201ENST00000338399 LYZL2Q7Z4W2 148 aa12.06□□□□□ -0.48
CDK5RAP3-201ENST00000338399 ZNF695Q8IW36 515 aa12.06□□□□□ -0.48
CDK5RAP3-201ENST00000338399 OR2T35Q8NGX2 323 aa12.06□□□□□ -0.48
CDK5RAP3-201ENST00000338399 C18orf12Q96KH6 178 aa12.06□□□□□ -0.48
CDK5RAP3-201ENST00000338399 TMEM56Q96MV1 263 aa12.06□□□□□ -0.48
CDK5RAP3-201ENST00000338399 TMEM133Q9H2Q1 129 aa12.06□□□□□ -0.48
CDK5RAP3-201ENST00000338399 LIN7CQ9NUP9 197 aaKnown RBP12.06□□□□□ -0.48
CDK5RAP3-201ENST00000338399 GAB2Q9UQC2 676 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms