RNA–Protein interactions for RNA: ENST00000332858.10

TUBA1B-201, Transcript of tubulin alpha 1b, humanhuman

TSL 1 (best)

Gene TUBA1B, Length 3,198 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-201ENST00000332858 BTBD17A6NE02 478 aa11.29□□□□□ -0.6
TUBA1B-201ENST00000332858 MLNRO43193 412 aa11.29□□□□□ -0.6
TUBA1B-201ENST00000332858 CD55P08174 381 aa11.29□□□□□ -0.6
TUBA1B-201ENST00000332858 SLC25A6P12236 298 aa11.29□□□□□ -0.6
TUBA1B-201ENST00000332858 ERVFRD-1P60508 538 aa11.29□□□□□ -0.6
TUBA1B-201ENST00000332858 AESQ08117 197 aa11.29□□□□□ -0.6
TUBA1B-201ENST00000332858 NCMAPQ5T1S8 102 aa11.29□□□□□ -0.6
TUBA1B-201ENST00000332858 FAM180AQ6UWF9 173 aa11.29□□□□□ -0.6
TUBA1B-201ENST00000332858 OR52L2PQ8NGH6 319 aa11.29□□□□□ -0.6
TUBA1B-201ENST00000332858 LSM10Q969L4 123 aaKnown RBP11.29□□□□□ -0.6
TUBA1B-201ENST00000332858 CDH20Q9HBT6 801 aa11.29□□□□□ -0.6
TUBA1B-201ENST00000332858 HSPB1P04792 205 aaKnown RBP11.29□□□□□ -0.6
TUBA1B-201ENST00000332858 RPS10P46783 165 aaKnown RBP11.29□□□□□ -0.6
TUBA1B-201ENST00000332858 OR3A1P47881 315 aa11.29□□□□□ -0.6
TUBA1B-201ENST00000332858 RPS16P62249 146 aaKnown RBP11.29□□□□□ -0.6
TUBA1B-201ENST00000332858 ZNF808Q8N4W9 903 aaPredicted RBP11.29□□□□□ -0.6
TUBA1B-201ENST00000332858 KLF14Q8TD94 323 aaPredicted RBP11.29□□□□□ -0.6
TUBA1B-201ENST00000332858 Q8WTZ3 238 aa11.29□□□□□ -0.6
TUBA1B-201ENST00000332858 ANAPC16Q96DE5 110 aa11.29□□□□□ -0.6
TUBA1B-201ENST00000332858 TREM2Q9NZC2 230 aa11.29□□□□□ -0.6
TUBA1B-201ENST00000332858 CACNA1GO43497 2377 aa11.29□□□□□ -0.6
TUBA1B-201ENST00000332858 DFFBO76075 338 aa11.28□□□□□ -0.6
TUBA1B-201ENST00000332858 HAND1O96004 215 aa11.28□□□□□ -0.6
TUBA1B-201ENST00000332858 KRASP01116 189 aa11.28□□□□□ -0.6
TUBA1B-201ENST00000332858 BRWD1-AS2P59051 145 aa11.28□□□□□ -0.6
TUBA1B-201ENST00000332858 C11orf53Q8IXP5 236 aa11.28□□□□□ -0.6
TUBA1B-201ENST00000332858 OR4C12Q96R67 309 aa11.28□□□□□ -0.6
TUBA1B-201ENST00000332858 OBP2BQ9NPH6 170 aa11.28□□□□□ -0.6
TUBA1B-201ENST00000332858 WIPI2Q9Y4P8 454 aa11.28□□□□□ -0.6
TUBA1B-201ENST00000332858 C12orf77C9JDV5 145 aa11.28□□□□□ -0.6
TUBA1B-201ENST00000332858 SH2D1BO14796 132 aa11.28□□□□□ -0.6
TUBA1B-201ENST00000332858 MDH2P40926 338 aaKnown RBP11.28□□□□□ -0.6
TUBA1B-201ENST00000332858 SOX8P57073 446 aa11.28□□□□□ -0.6
TUBA1B-201ENST00000332858 UBE2NP61088 152 aaKnown RBP11.28□□□□□ -0.6
TUBA1B-201ENST00000332858 ODF1Q14990 250 aa11.28□□□□□ -0.6
TUBA1B-201ENST00000332858 ELOBQ15370 118 aa11.28□□□□□ -0.6
TUBA1B-201ENST00000332858 BEND4Q6ZU67 534 aa11.28□□□□□ -0.6
TUBA1B-201ENST00000332858 METRNQ9UJH8 293 aa11.28□□□□□ -0.6
TUBA1B-201ENST00000332858 POLDIP2Q9Y2S7 368 aa11.28□□□□□ -0.6
TUBA1B-201ENST00000332858 ATMQ13315 3056 aa11.28□□□□□ -0.6
TUBA1B-201ENST00000332858 TGIF2-C20orf24A0A0A6YYL0 155 aa11.28□□□□□ -0.6
TUBA1B-201ENST00000332858 LOC102723971A0A1B0GUV8 181 aa11.28□□□□□ -0.6
TUBA1B-201ENST00000332858 NKX2-8O15522 239 aa11.28□□□□□ -0.6
TUBA1B-201ENST00000332858 ZNF806P0C7X5 589 aa11.28□□□□□ -0.6
TUBA1B-201ENST00000332858 G6PCP35575 357 aa11.28□□□□□ -0.6
TUBA1B-201ENST00000332858 ELLP55199 621 aaPredicted RBP11.28□□□□□ -0.6
TUBA1B-201ENST00000332858 RAB11AP62491 216 aa11.28□□□□□ -0.6
TUBA1B-201ENST00000332858 ZNF816Q0VGE8 651 aaPredicted RBP11.28□□□□□ -0.6
TUBA1B-201ENST00000332858 OR8G2PQ6IF36 304 aa11.28□□□□□ -0.6
TUBA1B-201ENST00000332858 BTNL3Q6UXE8 466 aa11.28□□□□□ -0.6
TUBA1B-201ENST00000332858 CNEP1R1Q8N9A8 125 aa11.28□□□□□ -0.6
TUBA1B-201ENST00000332858 MALSU1Q96EH3 234 aa11.28□□□□□ -0.6
TUBA1B-201ENST00000332858 GMPPAQ96IJ6 420 aaPredicted RBP11.28□□□□□ -0.6
TUBA1B-201ENST00000332858 TMEM9BQ9NQ34 198 aa11.28□□□□□ -0.6
TUBA1B-201ENST00000332858 UFSP2Q9NUQ7 469 aa11.28□□□□□ -0.6
TUBA1B-201ENST00000332858 METTL1Q9UBP6 276 aaKnown RBP11.28□□□□□ -0.6
TUBA1B-201ENST00000332858 M0R296 226 aa11.27□□□□□ -0.6
TUBA1B-201ENST00000332858 MAS1LP35410 378 aa11.27□□□□□ -0.6
TUBA1B-201ENST00000332858 TNFSF10P50591 281 aa11.27□□□□□ -0.6
TUBA1B-201ENST00000332858 GABRA6Q16445 453 aa11.27□□□□□ -0.6
TUBA1B-201ENST00000332858 PRAMEF6Q5VXH4 476 aa11.27□□□□□ -0.6
TUBA1B-201ENST00000332858 FAM90A2PQ658T7 463 aa11.27□□□□□ -0.6
TUBA1B-201ENST00000332858 SCGB1C1Q8TD33 95 aa11.27□□□□□ -0.6
TUBA1B-201ENST00000332858 RBMXL1Q96E39 390 aaKnown RBP11.27□□□□□ -0.6
TUBA1B-201ENST00000332858 RCC1LQ96I51 464 aaKnown RBP11.27□□□□□ -0.6
TUBA1B-201ENST00000332858 TRIB1Q96RU8 372 aa11.27□□□□□ -0.6
TUBA1B-201ENST00000332858 OR2D2Q9H210 308 aa11.27□□□□□ -0.6
TUBA1B-201ENST00000332858 LIN7CQ9NUP9 197 aaKnown RBP11.27□□□□□ -0.6
TUBA1B-201ENST00000332858 HMGB3O15347 200 aaKnown RBP11.27□□□□□ -0.61
TUBA1B-201ENST00000332858 IGKV1D-33P01593 117 aa11.27□□□□□ -0.61
TUBA1B-201ENST00000332858 IGKV1-33P01594 117 aa11.27□□□□□ -0.61
TUBA1B-201ENST00000332858 WNT2P09544 360 aa11.27□□□□□ -0.61
TUBA1B-201ENST00000332858 VWA1Q6PCB0 445 aa11.27□□□□□ -0.61
TUBA1B-201ENST00000332858 MOB1BQ7L9L4 216 aa11.27□□□□□ -0.61
TUBA1B-201ENST00000332858 Q8IYB0 196 aa11.27□□□□□ -0.61
TUBA1B-201ENST00000332858 SEBOXQ9HB31 216 aaPredicted RBP11.27□□□□□ -0.61
TUBA1B-201ENST00000332858 MSL2Q9HCI7 577 aa11.27□□□□□ -0.61
TUBA1B-201ENST00000332858 IQCF6A8MYZ5 107 aa11.26□□□□□ -0.61
TUBA1B-201ENST00000332858 CLN5O75503 358 aa11.26□□□□□ -0.61
TUBA1B-201ENST00000332858 YIF1AO95070 293 aa11.26□□□□□ -0.61
TUBA1B-201ENST00000332858 LRRC75BQ2VPJ9 315 aa11.26□□□□□ -0.61
TUBA1B-201ENST00000332858 OTOGLQ3ZCN5 2332 aa11.26□□□□□ -0.61
TUBA1B-201ENST00000332858 KHDC3LQ587J8 217 aa11.26□□□□□ -0.61
TUBA1B-201ENST00000332858 ZNF787Q6DD87 383 aa11.26□□□□□ -0.61
TUBA1B-201ENST00000332858 NIPSNAP3BQ9BS92 247 aa11.26□□□□□ -0.61
TUBA1B-201ENST00000332858 HIPK2Q9H2X6 1198 aa11.26□□□□□ -0.61
TUBA1B-201ENST00000332858 ADGRG4Q8IZF6 3080 aa11.26□□□□□ -0.61
TUBA1B-201ENST00000332858 IGHV3-43A0A0B4J1X8 118 aa11.26□□□□□ -0.61
TUBA1B-201ENST00000332858 UBE2L5PA0A1B0GUS4 154 aa11.26□□□□□ -0.61
TUBA1B-201ENST00000332858 IGHV3-43DP0DP04 118 aa11.26□□□□□ -0.61
TUBA1B-201ENST00000332858 CCL11P51671 97 aa11.26□□□□□ -0.61
TUBA1B-201ENST00000332858 ZNF124Q15973 351 aa11.26□□□□□ -0.61
TUBA1B-201ENST00000332858 Q3ZCU0 254 aa11.26□□□□□ -0.61
TUBA1B-201ENST00000332858 RFESDQ8TAC1 157 aa11.26□□□□□ -0.61
TUBA1B-201ENST00000332858 MRGPRDQ8TDS7 321 aa11.26□□□□□ -0.61
TUBA1B-201ENST00000332858 TVP23CQ96ET8 276 aa11.26□□□□□ -0.61
TUBA1B-201ENST00000332858 COQ2Q96H96 371 aa11.26□□□□□ -0.61
TUBA1B-201ENST00000332858 DCTN5Q9BTE1 182 aa11.26□□□□□ -0.61
TUBA1B-201ENST00000332858 RBKSQ9H477 322 aa11.26□□□□□ -0.61
TUBA1B-201ENST00000332858 UNKLQ9H9P5 680 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms