RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 SPANXN2Q5MJ10 180 aa12.93□□□□□ -0.34
LRRC28-202ENST00000331450 ZNF660Q6AZW8 331 aaPredicted RBP12.93□□□□□ -0.34
LRRC28-202ENST00000331450 FAM71F2Q6NXP2 309 aa12.93□□□□□ -0.34
LRRC28-202ENST00000331450 ZNF833PQ6ZTB9 187 aa12.93□□□□□ -0.34
LRRC28-202ENST00000331450 LYG1Q8N1E2 194 aa12.93□□□□□ -0.34
LRRC28-202ENST00000331450 PIFOQ8TCI5 191 aa12.93□□□□□ -0.34
LRRC28-202ENST00000331450 SSMEM1Q8WWF3 244 aa12.93□□□□□ -0.34
LRRC28-202ENST00000331450 RTN4IP1Q8WWV3 396 aaPredicted RBP12.93□□□□□ -0.34
LRRC28-202ENST00000331450 CFHR4Q92496 578 aa12.93□□□□□ -0.34
LRRC28-202ENST00000331450 ZDHHC16Q969W1 377 aa12.93□□□□□ -0.34
LRRC28-202ENST00000331450 RPEQ96AT9 228 aa12.93□□□□□ -0.34
LRRC28-202ENST00000331450 ABHD14BQ96IU4 210 aa12.93□□□□□ -0.34
LRRC28-202ENST00000331450 GHITMQ9H3K2 345 aa12.93□□□□□ -0.34
LRRC28-202ENST00000331450 ZNF107Q9UII5 783 aaPredicted RBP12.93□□□□□ -0.34
LRRC28-202ENST00000331450 OR2W1Q9Y3N9 320 aa12.93□□□□□ -0.34
LRRC28-202ENST00000331450 CLDN34H7C241 214 aa12.92□□□□□ -0.34
LRRC28-202ENST00000331450 PROP1O75360 226 aa12.92□□□□□ -0.34
LRRC28-202ENST00000331450 VENTXO95231 258 aa12.92□□□□□ -0.34
LRRC28-202ENST00000331450 IFNA2P01563 188 aa12.92□□□□□ -0.34
LRRC28-202ENST00000331450 OR5H8P0DN80 308 aa12.92□□□□□ -0.34
LRRC28-202ENST00000331450 HLA-DMAP28067 261 aa12.92□□□□□ -0.34
LRRC28-202ENST00000331450 HRH1P35367 487 aa12.92□□□□□ -0.34
LRRC28-202ENST00000331450 DYRK1AQ13627 763 aa12.92□□□□□ -0.34
LRRC28-202ENST00000331450 CCDC144NLQ6NUI1 221 aa12.92□□□□□ -0.34
LRRC28-202ENST00000331450 RBMS3Q6XE24 437 aaKnown RBP12.92□□□□□ -0.34
LRRC28-202ENST00000331450 OR8H3Q8N146 312 aa12.92□□□□□ -0.34
LRRC28-202ENST00000331450 TMEM86BQ8N661 226 aa12.92□□□□□ -0.34
LRRC28-202ENST00000331450 OR5H2Q8NGV7 314 aa12.92□□□□□ -0.34
LRRC28-202ENST00000331450 TRIM63Q969Q1 353 aa12.92□□□□□ -0.34
LRRC28-202ENST00000331450 SSX3Q99909 188 aa12.92□□□□□ -0.34
LRRC28-202ENST00000331450 SRRQ9GZT4 340 aa12.92□□□□□ -0.34
LRRC28-202ENST00000331450 EHFQ9NZC4 300 aa12.92□□□□□ -0.34
LRRC28-202ENST00000331450 PIPOXQ9P0Z9 390 aa12.92□□□□□ -0.34
LRRC28-202ENST00000331450 POMT1Q9Y6A1 747 aa12.92□□□□□ -0.34
LRRC28-202ENST00000331450 ZFHX3Q15911 3703 aa12.91□□□□□ -0.34
LRRC28-202ENST00000331450 IGHV1-3A0A0C4DH29 117 aa12.91□□□□□ -0.34
LRRC28-202ENST00000331450 H3BUX3 64 aa12.91□□□□□ -0.34
LRRC28-202ENST00000331450 RAB29O14966 203 aa12.91□□□□□ -0.34
LRRC28-202ENST00000331450 TXNL1O43396 289 aa12.91□□□□□ -0.34
LRRC28-202ENST00000331450 PMP2P02689 132 aa12.91□□□□□ -0.34
LRRC28-202ENST00000331450 CD74P04233 296 aa12.91□□□□□ -0.34
LRRC28-202ENST00000331450 GAPDHP04406 335 aaKnown RBP12.91□□□□□ -0.34
LRRC28-202ENST00000331450 OR8U9P0C7N5 309 aa12.91□□□□□ -0.34
LRRC28-202ENST00000331450 TBPP20226 339 aa12.91□□□□□ -0.34
LRRC28-202ENST00000331450 OR3A3P47888 321 aa12.91□□□□□ -0.34
LRRC28-202ENST00000331450 RFX2P48378 723 aa12.91□□□□□ -0.34
LRRC28-202ENST00000331450 BAMBIQ13145 260 aa12.91□□□□□ -0.34
LRRC28-202ENST00000331450 SLC9A3R2Q15599 337 aa12.91□□□□□ -0.34
LRRC28-202ENST00000331450 PLA1AQ53H76 456 aa12.91□□□□□ -0.34
LRRC28-202ENST00000331450 ACTBL2Q562R1 376 aa12.91□□□□□ -0.34
LRRC28-202ENST00000331450 VAX1Q5SQQ9 334 aa12.91□□□□□ -0.34
LRRC28-202ENST00000331450 MFSD4AQ8N468 514 aa12.91□□□□□ -0.34
LRRC28-202ENST00000331450 TMEM229BQ8NBD8 167 aa12.91□□□□□ -0.34
LRRC28-202ENST00000331450 OR8U1Q8NH10 309 aa12.91□□□□□ -0.34
LRRC28-202ENST00000331450 GIMAP1Q8WWP7 306 aa12.91□□□□□ -0.34
LRRC28-202ENST00000331450 C5orf30Q96GV9 206 aa12.91□□□□□ -0.34
LRRC28-202ENST00000331450 JMJD8Q96S16 334 aa12.91□□□□□ -0.34
LRRC28-202ENST00000331450 OR2D2Q9H210 308 aa12.91□□□□□ -0.34
LRRC28-202ENST00000331450 AKIP1Q9NQ31 210 aa12.91□□□□□ -0.34
LRRC28-202ENST00000331450 GAB2Q9UQC2 676 aa12.91□□□□□ -0.34
LRRC28-202ENST00000331450 IGKV1D-13A0A0B4J2D9 117 aa12.9□□□□□ -0.34
LRRC28-202ENST00000331450 ZNF736B4DX44 427 aaPredicted RBP12.9□□□□□ -0.34
LRRC28-202ENST00000331450 TIMM23O14925 209 aa12.9□□□□□ -0.34
LRRC28-202ENST00000331450 PPYP01298 95 aa12.9□□□□□ -0.34
LRRC28-202ENST00000331450 CD3DP04234 171 aa12.9□□□□□ -0.34
LRRC28-202ENST00000331450 IGKV1-13P0DP09 117 aa12.9□□□□□ -0.34
LRRC28-202ENST00000331450 AADACP22760 399 aa12.9□□□□□ -0.34
LRRC28-202ENST00000331450 FCGR2CP31995 323 aa12.9□□□□□ -0.34
LRRC28-202ENST00000331450 REG1BP48304 166 aa12.9□□□□□ -0.34
LRRC28-202ENST00000331450 TAS2R19P59542 299 aa12.9□□□□□ -0.34
LRRC28-202ENST00000331450 UBA52P62987 128 aaKnown RBP12.9□□□□□ -0.34
LRRC28-202ENST00000331450 PYDC2Q56P42 97 aa12.9□□□□□ -0.34
LRRC28-202ENST00000331450 RPL39P5Q59GN2 51 aa12.9□□□□□ -0.34
LRRC28-202ENST00000331450 DHRS11Q6UWP2 260 aa12.9□□□□□ -0.34
LRRC28-202ENST00000331450 TGIF2LXQ8IUE1 241 aa12.9□□□□□ -0.34
LRRC28-202ENST00000331450 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.9□□□□□ -0.34
LRRC28-202ENST00000331450 OR5R1Q8NH85 324 aa12.9□□□□□ -0.34
LRRC28-202ENST00000331450 SDHCQ99643 169 aaPredicted RBP12.9□□□□□ -0.34
LRRC28-202ENST00000331450 DPAGT1Q9H3H5 408 aa12.9□□□□□ -0.34
LRRC28-202ENST00000331450 VPREB3Q9UKI3 123 aa12.9□□□□□ -0.34
LRRC28-202ENST00000331450 ANKRD20A5PA0PJZ0 165 aa12.89□□□□□ -0.35
LRRC28-202ENST00000331450 FAM90A9PA6NNJ1 464 aa12.89□□□□□ -0.35
LRRC28-202ENST00000331450 M0QYG6 137 aa12.89□□□□□ -0.35
LRRC28-202ENST00000331450 CSF1P09603 554 aa12.89□□□□□ -0.35
LRRC28-202ENST00000331450 RAB13P51153 203 aa12.89□□□□□ -0.35
LRRC28-202ENST00000331450 LUMP51884 338 aaPredicted RBP12.89□□□□□ -0.35
LRRC28-202ENST00000331450 ARHGDIBP52566 201 aa12.89□□□□□ -0.35
LRRC28-202ENST00000331450 ZNF45Q02386 682 aa12.89□□□□□ -0.35
LRRC28-202ENST00000331450 FBLN7Q53RD9 439 aa12.89□□□□□ -0.35
LRRC28-202ENST00000331450 RNASE10Q5GAN6 216 aaKnown RBP12.89□□□□□ -0.35
LRRC28-202ENST00000331450 Q8N402 240 aa12.89□□□□□ -0.35
LRRC28-202ENST00000331450 DUX5Q96PT3 197 aa12.89□□□□□ -0.35
LRRC28-202ENST00000331450 NABP2Q9BQ15 211 aa12.89□□□□□ -0.35
LRRC28-202ENST00000331450 THAP7Q9BT49 309 aaPredicted RBP12.89□□□□□ -0.35
LRRC28-202ENST00000331450 CHIAQ9BZP6 476 aa12.89□□□□□ -0.35
LRRC28-202ENST00000331450 TINAGL1Q9GZM7 467 aaPredicted RBP12.89□□□□□ -0.35
LRRC28-202ENST00000331450 TAS2R8Q9NYW2 309 aa12.89□□□□□ -0.35
LRRC28-202ENST00000331450 ZNF221Q9UK13 617 aa12.89□□□□□ -0.35
LRRC28-202ENST00000331450 RNF150Q9ULK6 438 aa12.89□□□□□ -0.35
LRRC28-202ENST00000331450 TCF19Q9Y242 345 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms