RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 SERPINE2P07093 398 aa13.38□□□□□ -0.27
PDGFB-201ENST00000331163 S100A2P29034 98 aa13.38□□□□□ -0.27
PDGFB-201ENST00000331163 REG1BP48304 166 aa13.38□□□□□ -0.27
PDGFB-201ENST00000331163 MZT1Q08AG7 82 aa13.38□□□□□ -0.27
PDGFB-201ENST00000331163 MIDNQ504T8 468 aa13.38□□□□□ -0.27
PDGFB-201ENST00000331163 COLCA1Q6ZS62 124 aa13.38□□□□□ -0.27
PDGFB-201ENST00000331163 OR52L2PQ8NGH6 319 aa13.38□□□□□ -0.27
PDGFB-201ENST00000331163 OR1L1Q8NH94 360 aa13.38□□□□□ -0.27
PDGFB-201ENST00000331163 NTNG2Q96CW9 530 aa13.38□□□□□ -0.27
PDGFB-201ENST00000331163 OR1A1Q9P1Q5 309 aa13.38□□□□□ -0.27
PDGFB-201ENST00000331163 PRRC2AP48634 2157 aaKnown RBP13.38□□□□□ -0.27
PDGFB-201ENST00000331163 C5orf52A6NGY3 159 aa13.38□□□□□ -0.27
PDGFB-201ENST00000331163 PSPNO60542 156 aa13.38□□□□□ -0.27
PDGFB-201ENST00000331163 AADACP22760 399 aa13.38□□□□□ -0.27
PDGFB-201ENST00000331163 COX7A1P24310 79 aa13.38□□□□□ -0.27
PDGFB-201ENST00000331163 CHATP28329 748 aa13.38□□□□□ -0.27
PDGFB-201ENST00000331163 CAMLGP49069 296 aa13.38□□□□□ -0.27
PDGFB-201ENST00000331163 ADIPOQQ15848 244 aa13.38□□□□□ -0.27
PDGFB-201ENST00000331163 OR51I2Q9H344 312 aa13.38□□□□□ -0.27
PDGFB-201ENST00000331163 ELOVL5Q9NYP7 299 aa13.38□□□□□ -0.27
PDGFB-201ENST00000331163 WIPI2Q9Y4P8 454 aa13.38□□□□□ -0.27
PDGFB-201ENST00000331163 DUS4LO95620 317 aaKnown RBP13.37□□□□□ -0.27
PDGFB-201ENST00000331163 CST4P01036 141 aa13.37□□□□□ -0.27
PDGFB-201ENST00000331163 IZUMO4Q1ZYL8 232 aa13.37□□□□□ -0.27
PDGFB-201ENST00000331163 EIF5AL1Q6IS14 154 aaKnown RBP13.37□□□□□ -0.27
PDGFB-201ENST00000331163 WDR82Q6UXN9 313 aa13.37□□□□□ -0.27
PDGFB-201ENST00000331163 CYTL1Q9NRR1 136 aa13.37□□□□□ -0.27
PDGFB-201ENST00000331163 GFOD1Q9NXC2 390 aa13.37□□□□□ -0.27
PDGFB-201ENST00000331163 E7EQL1 145 aa13.37□□□□□ -0.27
PDGFB-201ENST00000331163 IGHV1-46P01743 117 aa13.37□□□□□ -0.27
PDGFB-201ENST00000331163 THBDP07204 575 aa13.37□□□□□ -0.27
PDGFB-201ENST00000331163 FAM157CP0CG43 387 aa13.37□□□□□ -0.27
PDGFB-201ENST00000331163 ZNF674Q2M3X9 581 aa13.37□□□□□ -0.27
PDGFB-201ENST00000331163 IAH1Q2TAA2 248 aaPredicted RBP13.37□□□□□ -0.27
PDGFB-201ENST00000331163 FAM166AQ6J272 317 aa13.37□□□□□ -0.27
PDGFB-201ENST00000331163 CLEC18BQ6UXF7 455 aa13.37□□□□□ -0.27
PDGFB-201ENST00000331163 IL34Q6ZMJ4 242 aa13.37□□□□□ -0.27
PDGFB-201ENST00000331163 ABHD14BQ96IU4 210 aa13.37□□□□□ -0.27
PDGFB-201ENST00000331163 A0A1B0GV90 55 aa13.37□□□□□ -0.27
PDGFB-201ENST00000331163 WIPF3A6NGB9 483 aa13.37□□□□□ -0.27
PDGFB-201ENST00000331163 UMAD1C9J7I0 102 aa13.37□□□□□ -0.27
PDGFB-201ENST00000331163 CMTM1Q8IZ96 169 aa13.37□□□□□ -0.27
PDGFB-201ENST00000331163 RTN4IP1Q8WWV3 396 aaPredicted RBP13.37□□□□□ -0.27
PDGFB-201ENST00000331163 MRPL24Q96A35 216 aaKnown RBP13.37□□□□□ -0.27
PDGFB-201ENST00000331163 MAGT1Q9H0U3 335 aa13.37□□□□□ -0.27
PDGFB-201ENST00000331163 CCL28Q9NRJ3 127 aa13.37□□□□□ -0.27
PDGFB-201ENST00000331163 MFNGO00587 321 aa13.36□□□□□ -0.27
PDGFB-201ENST00000331163 IFNA21P01568 189 aa13.36□□□□□ -0.27
PDGFB-201ENST00000331163 RAB5AP20339 215 aa13.36□□□□□ -0.27
PDGFB-201ENST00000331163 CYCSP99999 105 aaKnown RBP13.36□□□□□ -0.27
PDGFB-201ENST00000331163 USF2Q15853 346 aaPredicted RBP13.36□□□□□ -0.27
PDGFB-201ENST00000331163 SLC25A24Q6NUK1 477 aa13.36□□□□□ -0.27
PDGFB-201ENST00000331163 ZNF695Q8IW36 515 aa13.36□□□□□ -0.27
PDGFB-201ENST00000331163 MRGPRFQ96AM1 343 aa13.36□□□□□ -0.27
PDGFB-201ENST00000331163 C1orf147Q96MC9 270 aaPredicted RBP13.36□□□□□ -0.27
PDGFB-201ENST00000331163 MS4A5Q9H3V2 200 aa13.36□□□□□ -0.27
PDGFB-201ENST00000331163 RCL1Q9Y2P8 373 aaKnown RBP13.36□□□□□ -0.27
PDGFB-201ENST00000331163 IQCF6A8MYZ5 107 aa13.36□□□□□ -0.27
PDGFB-201ENST00000331163 K7EPK0 472 aa13.36□□□□□ -0.27
PDGFB-201ENST00000331163 ENSAO43768 121 aaKnown RBP13.36□□□□□ -0.27
PDGFB-201ENST00000331163 IFNA2P01563 188 aa13.36□□□□□ -0.27
PDGFB-201ENST00000331163 ZNF816Q0VGE8 651 aaPredicted RBP13.36□□□□□ -0.27
PDGFB-201ENST00000331163 FAM71E2Q8N5Q1 922 aa13.36□□□□□ -0.27
PDGFB-201ENST00000331163 CCDC54Q8NEL0 328 aa13.36□□□□□ -0.27
PDGFB-201ENST00000331163 PRORYQ9H606 182 aa13.36□□□□□ -0.27
PDGFB-201ENST00000331163 COL27A1Q8IZC6 1860 aaPredicted RBP13.36□□□□□ -0.27
PDGFB-201ENST00000331163 ZNF727A8MUV8 499 aa13.36□□□□□ -0.27
PDGFB-201ENST00000331163 ST8SIA5O15466 376 aa13.36□□□□□ -0.27
PDGFB-201ENST00000331163 MT-ND4LP03901 98 aa13.36□□□□□ -0.27
PDGFB-201ENST00000331163 PAX6P26367 422 aa13.36□□□□□ -0.27
PDGFB-201ENST00000331163 RNF212Q495C1 297 aa13.36□□□□□ -0.27
PDGFB-201ENST00000331163 ZNF383Q8NA42 475 aa13.36□□□□□ -0.27
PDGFB-201ENST00000331163 PLPPR1Q8TBJ4 325 aa13.36□□□□□ -0.27
PDGFB-201ENST00000331163 TOLLIPQ9H0E2 274 aa13.36□□□□□ -0.27
PDGFB-201ENST00000331163 SPINT2O43291 252 aa13.35□□□□□ -0.27
PDGFB-201ENST00000331163 ANKRD55Q3KP44 614 aa13.35□□□□□ -0.27
PDGFB-201ENST00000331163 C4orf17Q53FE4 359 aa13.35□□□□□ -0.27
PDGFB-201ENST00000331163 SPINK9Q5DT21 86 aa13.35□□□□□ -0.27
PDGFB-201ENST00000331163 SPSB4Q96A44 273 aa13.35□□□□□ -0.27
PDGFB-201ENST00000331163 FBXL17Q9UF56 701 aa13.35□□□□□ -0.27
PDGFB-201ENST00000331163 TUBD1Q9UJT1 453 aa13.35□□□□□ -0.27
PDGFB-201ENST00000331163 OPN1MWP04001 364 aa13.35□□□□□ -0.27
PDGFB-201ENST00000331163 OR8U8P0C7N1 319 aa13.35□□□□□ -0.27
PDGFB-201ENST00000331163 OPN1MW2P0DN77 364 aa13.35□□□□□ -0.27
PDGFB-201ENST00000331163 OPN1MW3P0DN78 364 aa13.35□□□□□ -0.27
PDGFB-201ENST00000331163 PMELP40967 661 aa13.35□□□□□ -0.27
PDGFB-201ENST00000331163 LINC00205P59089 165 aa13.35□□□□□ -0.27
PDGFB-201ENST00000331163 HIST2H2BCQ6DN03 193 aa13.35□□□□□ -0.27
PDGFB-201ENST00000331163 C15orf54Q8N8G6 183 aa13.35□□□□□ -0.27
PDGFB-201ENST00000331163 OR10D4PQ8NGN7 298 aa13.35□□□□□ -0.27
PDGFB-201ENST00000331163 GALMQ96C23 342 aa13.35□□□□□ -0.27
PDGFB-201ENST00000331163 BBC3Q96PG8 261 aaPredicted RBP13.35□□□□□ -0.27
PDGFB-201ENST00000331163 SUCNR1Q9BXA5 334 aa13.35□□□□□ -0.27
PDGFB-201ENST00000331163 CLDN14O95500 239 aa13.34□□□□□ -0.27
PDGFB-201ENST00000331163 RPS2P15880 293 aaKnown RBP13.34□□□□□ -0.27
PDGFB-201ENST00000331163 C20orf204Q6ZNR8 217 aa13.34□□□□□ -0.27
PDGFB-201ENST00000331163 DNM1P46Q6ZS02 220 aa13.34□□□□□ -0.27
PDGFB-201ENST00000331163 BOD1Q96IK1 185 aa13.34□□□□□ -0.27
PDGFB-201ENST00000331163 SCGB3A2Q96PL1 93 aa13.34□□□□□ -0.27
PDGFB-201ENST00000331163 GGACTQ9BVM4 153 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms