RNA–Protein interactions for RNA: ENST00000330687.8

CMTM4-201, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 3,414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-201ENST00000330687 RNF114Q9Y508 228 aa17.57■□□□□ 0.4
CMTM4-201ENST00000330687 KRASP01116 189 aa17.57■□□□□ 0.4
CMTM4-201ENST00000330687 LINC00271P0C7V0 271 aa17.57■□□□□ 0.4
CMTM4-201ENST00000330687 UCP1P25874 307 aa17.57■□□□□ 0.4
CMTM4-201ENST00000330687 CAPZBP47756 277 aa17.57■□□□□ 0.4
CMTM4-201ENST00000330687 TCL1AP56279 114 aa17.57■□□□□ 0.4
CMTM4-201ENST00000330687 MAJINQ3KP22 176 aa17.57■□□□□ 0.4
CMTM4-201ENST00000330687 OR2M3Q8NG83 312 aa17.57■□□□□ 0.4
CMTM4-201ENST00000330687 OXGR1Q96P68 337 aa17.57■□□□□ 0.4
CMTM4-201ENST00000330687 ALKBH3Q96Q83 286 aaPredicted RBP17.57■□□□□ 0.4
CMTM4-201ENST00000330687 R4GN57 208 aa17.57■□□□□ 0.4
CMTM4-201ENST00000330687 BPIFB3P59826 476 aa17.57■□□□□ 0.4
CMTM4-201ENST00000330687 LRRC75BQ2VPJ9 315 aa17.57■□□□□ 0.4
CMTM4-201ENST00000330687 RAET1LQ5VY80 246 aa17.57■□□□□ 0.4
CMTM4-201ENST00000330687 CLN8Q9UBY8 286 aa17.57■□□□□ 0.4
CMTM4-201ENST00000330687 PTRH2Q9Y3E5 179 aaKnown RBP17.57■□□□□ 0.4
CMTM4-201ENST00000330687 PXMP4Q9Y6I8 212 aa17.57■□□□□ 0.4
CMTM4-201ENST00000330687 SNURFLB1AK76 121 aa17.56■□□□□ 0.4
CMTM4-201ENST00000330687 EDDM3BP56851 147 aa17.56■□□□□ 0.4
CMTM4-201ENST00000330687 SERF2P84101 59 aa17.56■□□□□ 0.4
CMTM4-201ENST00000330687 FBXL7Q9UJT9 491 aa17.56■□□□□ 0.4
CMTM4-201ENST00000330687 RBM11P57052 281 aaKnown RBP17.56■□□□□ 0.4
CMTM4-201ENST00000330687 SOX8P57073 446 aa17.56■□□□□ 0.4
CMTM4-201ENST00000330687 TFF3Q07654 80 aa17.56■□□□□ 0.4
CMTM4-201ENST00000330687 PRR31Q5SQ13 230 aa17.56■□□□□ 0.4
CMTM4-201ENST00000330687 ZNF488Q96MN9 340 aa17.56■□□□□ 0.4
CMTM4-201ENST00000330687 A0A0U1RQV5 110 aa17.56■□□□□ 0.4
CMTM4-201ENST00000330687 SAXO1Q8IYX7 474 aa17.56■□□□□ 0.4
CMTM4-201ENST00000330687 HEATR1Q9H583 2144 aaKnown RBP17.56■□□□□ 0.4
CMTM4-201ENST00000330687 BCL3P20749 454 aa17.55■□□□□ 0.4
CMTM4-201ENST00000330687 NPPCP23582 126 aa17.55■□□□□ 0.4
CMTM4-201ENST00000330687 OIT3Q8WWZ8 545 aa17.55■□□□□ 0.4
CMTM4-201ENST00000330687 TMEM250H0YL14 139 aa17.55■□□□□ 0.4
CMTM4-201ENST00000330687 DHHO43323 396 aa17.55■□□□□ 0.4
CMTM4-201ENST00000330687 NDUFB8O95169 186 aa17.55■□□□□ 0.4
CMTM4-201ENST00000330687 HTD2P86397 168 aa17.55■□□□□ 0.4
CMTM4-201ENST00000330687 LINC01551Q86U37 167 aa17.55■□□□□ 0.4
CMTM4-201ENST00000330687 ST6GALNAC6Q969X2 333 aa17.55■□□□□ 0.4
CMTM4-201ENST00000330687 TBL2Q9Y4P3 447 aaKnown RBP17.55■□□□□ 0.4
CMTM4-201ENST00000330687 CBR3O75828 277 aa17.54■□□□□ 0.4
CMTM4-201ENST00000330687 CCL2P13500 99 aa17.54■□□□□ 0.4
CMTM4-201ENST00000330687 ATP6V1FQ16864 119 aa17.54■□□□□ 0.4
CMTM4-201ENST00000330687 SP5Q6BEB4 398 aaPredicted RBP17.54■□□□□ 0.4
CMTM4-201ENST00000330687 LCN12Q6JVE5 192 aa17.54■□□□□ 0.4
CMTM4-201ENST00000330687 ZNF295-AS1Q8N0V1 137 aa17.54■□□□□ 0.4
CMTM4-201ENST00000330687 RBFOX2O43251 390 aaKnown RBP eCLIP17.54■□□□□ 0.4
CMTM4-201ENST00000330687 RABEPKQ7Z6M1 372 aa17.54■□□□□ 0.4
CMTM4-201ENST00000330687 KMT5CQ86Y97 462 aa17.54■□□□□ 0.4
CMTM4-201ENST00000330687 GPM6AP51674 278 aa17.54■□□□□ 0.4
CMTM4-201ENST00000330687 RPL15P61313 204 aaKnown RBP17.54■□□□□ 0.4
CMTM4-201ENST00000330687 LHFPL2Q6ZUX7 228 aa17.54■□□□□ 0.4
CMTM4-201ENST00000330687 LRRC61Q9BV99 259 aa17.54■□□□□ 0.4
CMTM4-201ENST00000330687 MTIF3Q9H2K0 278 aaKnown RBP17.54■□□□□ 0.4
CMTM4-201ENST00000330687 NAT8BQ9UHF3 227 aa17.54■□□□□ 0.4
CMTM4-201ENST00000330687 CTXND1A0A1B0GTU2 59 aa17.53■□□□□ 0.4
CMTM4-201ENST00000330687 A0A1W2PPV4 95 aa17.53■□□□□ 0.4
CMTM4-201ENST00000330687 TDGF1P13385 188 aa17.53■□□□□ 0.4
CMTM4-201ENST00000330687 TMEM211Q6ICI0 200 aa17.53■□□□□ 0.4
CMTM4-201ENST00000330687 TEX43Q6ZNM6 134 aa17.53■□□□□ 0.4
CMTM4-201ENST00000330687 OR1L3Q8NH93 324 aa17.53■□□□□ 0.4
CMTM4-201ENST00000330687 OR5P3Q8WZ94 311 aa17.53■□□□□ 0.4
CMTM4-201ENST00000330687 GAL3ST2Q9H3Q3 398 aa17.53■□□□□ 0.4
CMTM4-201ENST00000330687 LDLRAD2Q5SZI1 272 aa17.53■□□□□ 0.4
CMTM4-201ENST00000330687 TMEM92Q6UXU6 159 aa17.53■□□□□ 0.4
CMTM4-201ENST00000330687 MAP1BP46821 2468 aaKnown RBP17.53■□□□□ 0.4
CMTM4-201ENST00000330687 ZNF738Q8NE65 137 aa17.53■□□□□ 0.4
CMTM4-201ENST00000330687 TIMM8BQ9Y5J9 83 aaPredicted RBP17.53■□□□□ 0.4
CMTM4-201ENST00000330687 NBEAQ8NFP9 2946 aa17.53■□□□□ 0.4
CMTM4-201ENST00000330687 FRYLO94915 3013 aa17.52■□□□□ 0.4
CMTM4-201ENST00000330687 ZNF816Q0VGE8 651 aaPredicted RBP17.52■□□□□ 0.4
CMTM4-201ENST00000330687 ZNF596Q8TC21 504 aa17.52■□□□□ 0.4
CMTM4-201ENST00000330687 SFRP2Q96HF1 295 aa17.52■□□□□ 0.4
CMTM4-201ENST00000330687 OR1A1Q9P1Q5 309 aa17.52■□□□□ 0.4
CMTM4-201ENST00000330687 TP73-AS1Q9UF72 201 aa17.52■□□□□ 0.4
CMTM4-201ENST00000330687 COX5AP20674 150 aa17.52■□□□□ 0.4
CMTM4-201ENST00000330687 PLPPR5Q32ZL2 321 aa17.52■□□□□ 0.4
CMTM4-201ENST00000330687 OR56B2PQ8NGI1 322 aa17.52■□□□□ 0.4
CMTM4-201ENST00000330687 ELOVL5Q9NYP7 299 aa17.52■□□□□ 0.4
CMTM4-201ENST00000330687 UQCR10Q9UDW1 63 aa17.52■□□□□ 0.4
CMTM4-201ENST00000330687 IGKV3D-11A0A0A0MRZ8 115 aa17.52■□□□□ 0.39
CMTM4-201ENST00000330687 OR6C6A6NF89 314 aa17.52■□□□□ 0.39
CMTM4-201ENST00000330687 NKX6-3A6NJ46 265 aa17.52■□□□□ 0.39
CMTM4-201ENST00000330687 ZNF32P17041 273 aa17.52■□□□□ 0.39
CMTM4-201ENST00000330687 COL8A2P25067 703 aa17.52■□□□□ 0.39
CMTM4-201ENST00000330687 GNB1P62873 340 aa17.52■□□□□ 0.39
CMTM4-201ENST00000330687 IGFBP7Q16270 282 aa17.52■□□□□ 0.39
CMTM4-201ENST00000330687 ZNF808Q8N4W9 903 aaPredicted RBP17.52■□□□□ 0.39
CMTM4-201ENST00000330687 PSMG3Q9BT73 122 aaPredicted RBP17.52■□□□□ 0.39
CMTM4-201ENST00000330687 KLF3P57682 345 aaPredicted RBP17.51■□□□□ 0.39
CMTM4-201ENST00000330687 PAFAH1B2P68402 229 aa17.51■□□□□ 0.39
CMTM4-201ENST00000330687 LCN2P80188 198 aa17.51■□□□□ 0.39
CMTM4-201ENST00000330687 IFI44Q8TCB0 444 aa17.51■□□□□ 0.39
CMTM4-201ENST00000330687 KLHDC7BQ96G42 594 aa17.51■□□□□ 0.39
CMTM4-201ENST00000330687 TP53TG3Q9ULZ0 132 aa17.51■□□□□ 0.39
CMTM4-201ENST00000330687 IGKV1-6A0A0C4DH72 117 aa17.51■□□□□ 0.39
CMTM4-201ENST00000330687 NXPH2O95156 264 aa17.51■□□□□ 0.39
CMTM4-201ENST00000330687 SLC25A6P12236 298 aa17.51■□□□□ 0.39
CMTM4-201ENST00000330687 DRD1P21728 446 aa17.51■□□□□ 0.39
CMTM4-201ENST00000330687 OR1D5P58170 312 aa17.51■□□□□ 0.39
CMTM4-201ENST00000330687 SELENOTP62341 195 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms