RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 ARHGAP21Q5T5U3 1957 aa11.86□□□□□ -0.51
ATP2C1-201ENST00000328560 DEFB108AA8MXU0 73 aa11.85□□□□□ -0.51
ATP2C1-201ENST00000328560 PSPNO60542 156 aa11.85□□□□□ -0.51
ATP2C1-201ENST00000328560 FABP1P07148 127 aa11.85□□□□□ -0.51
ATP2C1-201ENST00000328560 LINC00205P59089 165 aa11.85□□□□□ -0.51
ATP2C1-201ENST00000328560 PSG7Q13046 419 aa11.85□□□□□ -0.51
ATP2C1-201ENST00000328560 ZNF880Q6PDB4 577 aa11.85□□□□□ -0.51
ATP2C1-201ENST00000328560 HAPLN4Q86UW8 402 aa11.85□□□□□ -0.51
ATP2C1-201ENST00000328560 ZNF525Q8N782 197 aa11.85□□□□□ -0.51
ATP2C1-201ENST00000328560 TRBV6-6A0A0A6YYG2 114 aa11.85□□□□□ -0.51
ATP2C1-201ENST00000328560 LINC00587B1AMM8 73 aa11.85□□□□□ -0.51
ATP2C1-201ENST00000328560 WISP2O76076 250 aa11.85□□□□□ -0.51
ATP2C1-201ENST00000328560 HAND1O96004 215 aa11.85□□□□□ -0.51
ATP2C1-201ENST00000328560 CD55P08174 381 aa11.85□□□□□ -0.51
ATP2C1-201ENST00000328560 MPV17P39210 176 aa11.85□□□□□ -0.51
ATP2C1-201ENST00000328560 FABP6P51161 128 aa11.85□□□□□ -0.51
ATP2C1-201ENST00000328560 C4orf17Q53FE4 359 aa11.85□□□□□ -0.51
ATP2C1-201ENST00000328560 SSX7Q7RTT5 188 aa11.85□□□□□ -0.51
ATP2C1-201ENST00000328560 MDS2Q8NDY4 140 aa11.85□□□□□ -0.51
ATP2C1-201ENST00000328560 MRGPRDQ8TDS7 321 aa11.85□□□□□ -0.51
ATP2C1-201ENST00000328560 SMIM6P0DI80 62 aa11.85□□□□□ -0.51
ATP2C1-201ENST00000328560 KHDC3LQ587J8 217 aa11.85□□□□□ -0.51
ATP2C1-201ENST00000328560 RCC1LQ96I51 464 aaKnown RBP11.85□□□□□ -0.51
ATP2C1-201ENST00000328560 CLN8Q9UBY8 286 aa11.85□□□□□ -0.51
ATP2C1-201ENST00000328560 DSPP15924 2871 aaKnown RBP11.84□□□□□ -0.51
ATP2C1-201ENST00000328560 LOC102723971A0A1B0GUV8 181 aa11.84□□□□□ -0.51
ATP2C1-201ENST00000328560 CEACAM1P13688 526 aa11.84□□□□□ -0.51
ATP2C1-201ENST00000328560 RAC2P15153 192 aa11.84□□□□□ -0.51
ATP2C1-201ENST00000328560 MDKP21741 143 aaPredicted RBP11.84□□□□□ -0.51
ATP2C1-201ENST00000328560 IGHV1-2P23083 117 aa11.84□□□□□ -0.51
ATP2C1-201ENST00000328560 EIF2S3P41091 472 aaKnown RBP11.84□□□□□ -0.51
ATP2C1-201ENST00000328560 SLC38A11Q08AI6 406 aa11.84□□□□□ -0.51
ATP2C1-201ENST00000328560 PRAMEF6Q5VXH4 476 aa11.84□□□□□ -0.51
ATP2C1-201ENST00000328560 MDH2P40926 338 aaKnown RBP11.84□□□□□ -0.51
ATP2C1-201ENST00000328560 ELOBQ15370 118 aa11.84□□□□□ -0.51
ATP2C1-201ENST00000328560 ZNF726P1Q15940 193 aa11.84□□□□□ -0.51
ATP2C1-201ENST00000328560 OR8G5Q8NG78 346 aa11.84□□□□□ -0.51
ATP2C1-201ENST00000328560 NINJ1Q92982 152 aa11.84□□□□□ -0.51
ATP2C1-201ENST00000328560 GALMQ96C23 342 aa11.84□□□□□ -0.51
ATP2C1-201ENST00000328560 MSL2Q9HCI7 577 aa11.84□□□□□ -0.51
ATP2C1-201ENST00000328560 SLC39A9Q9NUM3 307 aa11.84□□□□□ -0.51
ATP2C1-201ENST00000328560 MIOXQ9UGB7 285 aa11.84□□□□□ -0.51
ATP2C1-201ENST00000328560 CADP27708 2225 aa11.84□□□□□ -0.51
ATP2C1-201ENST00000328560 CEP250Q9BV73 2442 aa11.84□□□□□ -0.51
ATP2C1-201ENST00000328560 IGHV2-5P01817 119 aa11.84□□□□□ -0.51
ATP2C1-201ENST00000328560 SOX8P57073 446 aa11.84□□□□□ -0.51
ATP2C1-201ENST00000328560 MOB1BQ7L9L4 216 aa11.84□□□□□ -0.51
ATP2C1-201ENST00000328560 DEFB124Q8NES8 71 aa11.84□□□□□ -0.51
ATP2C1-201ENST00000328560 LHX4Q969G2 390 aa11.84□□□□□ -0.51
ATP2C1-201ENST00000328560 LSM10Q969L4 123 aaKnown RBP11.84□□□□□ -0.51
ATP2C1-201ENST00000328560 MAP1LC3B2A6NCE7 125 aa11.83□□□□□ -0.52
ATP2C1-201ENST00000328560 BCL2P10415 239 aa11.83□□□□□ -0.52
ATP2C1-201ENST00000328560 MAP1LC3BQ9GZQ8 125 aa11.83□□□□□ -0.52
ATP2C1-201ENST00000328560 GP6Q9HCN6 339 aa11.83□□□□□ -0.52
ATP2C1-201ENST00000328560 GSN-AS1Q9NRJ2 163 aa11.83□□□□□ -0.52
ATP2C1-201ENST00000328560 BDP1A6H8Y1 2624 aa11.83□□□□□ -0.52
ATP2C1-201ENST00000328560 TNRC6AQ8NDV7 1962 aaKnown RBP11.83□□□□□ -0.52
ATP2C1-201ENST00000328560 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.83□□□□□ -0.52
ATP2C1-201ENST00000328560 NKX2-8O15522 239 aa11.83□□□□□ -0.52
ATP2C1-201ENST00000328560 IGHV3-13P01766 116 aa11.83□□□□□ -0.52
ATP2C1-201ENST00000328560 IGHV3-7P01780 117 aa11.83□□□□□ -0.52
ATP2C1-201ENST00000328560 TRGC2P03986 189 aa11.83□□□□□ -0.52
ATP2C1-201ENST00000328560 PGA5P0DJD9 388 aa11.83□□□□□ -0.52
ATP2C1-201ENST00000328560 RPL30P62888 115 aaKnown RBP11.83□□□□□ -0.52
ATP2C1-201ENST00000328560 EDDM3AQ14507 147 aa11.83□□□□□ -0.52
ATP2C1-201ENST00000328560 Q8IYB0 196 aa11.83□□□□□ -0.52
ATP2C1-201ENST00000328560 KLF14Q8TD94 323 aaPredicted RBP11.83□□□□□ -0.52
ATP2C1-201ENST00000328560 ZNF251Q9BRH9 671 aa11.83□□□□□ -0.52
ATP2C1-201ENST00000328560 RBKSQ9H477 322 aa11.83□□□□□ -0.52
ATP2C1-201ENST00000328560 SLC25A22Q9H936 323 aa11.83□□□□□ -0.52
ATP2C1-201ENST00000328560 C12orf77C9JDV5 145 aa11.83□□□□□ -0.52
ATP2C1-201ENST00000328560 CLEC12BQ2HXU8 276 aa11.83□□□□□ -0.52
ATP2C1-201ENST00000328560 TMPRSS5Q9H3S3 457 aa11.83□□□□□ -0.52
ATP2C1-201ENST00000328560 DOK5Q9P104 306 aa11.83□□□□□ -0.52
ATP2C1-201ENST00000328560 SRSF6Q13247 344 aaKnown RBP11.82□□□□□ -0.52
ATP2C1-201ENST00000328560 ZNF610Q8N9Z0 462 aa11.82□□□□□ -0.52
ATP2C1-201ENST00000328560 GMPPAQ96IJ6 420 aaPredicted RBP11.82□□□□□ -0.52
ATP2C1-201ENST00000328560 FAM234AQ9H0X4 552 aa11.82□□□□□ -0.52
ATP2C1-201ENST00000328560 DCAF16Q9NXF7 216 aa11.82□□□□□ -0.52
ATP2C1-201ENST00000328560 CHD3Q12873 2000 aaKnown RBP11.82□□□□□ -0.52
ATP2C1-201ENST00000328560 TMEM30CPA0ZSE6 113 aa11.82□□□□□ -0.52
ATP2C1-201ENST00000328560 OR5H1A6NKK0 313 aa11.82□□□□□ -0.52
ATP2C1-201ENST00000328560 TIMM8AO60220 97 aaPredicted RBP11.82□□□□□ -0.52
ATP2C1-201ENST00000328560 S1PR2O95136 353 aa11.82□□□□□ -0.52
ATP2C1-201ENST00000328560 HBZP02008 142 aa11.82□□□□□ -0.52
ATP2C1-201ENST00000328560 SLC25A6P12236 298 aa11.82□□□□□ -0.52
ATP2C1-201ENST00000328560 LRRC75BQ2VPJ9 315 aa11.82□□□□□ -0.52
ATP2C1-201ENST00000328560 RPUSD4Q96CM3 377 aaKnown RBP11.82□□□□□ -0.52
ATP2C1-201ENST00000328560 TCEAL7Q9BRU2 100 aa11.82□□□□□ -0.52
ATP2C1-201ENST00000328560 DCTN5Q9BTE1 182 aa11.82□□□□□ -0.52
ATP2C1-201ENST00000328560 TRAV20A0A0B4J274 112 aa11.81□□□□□ -0.52
ATP2C1-201ENST00000328560 PIGBOS1A0A0B4J2F0 54 aa11.81□□□□□ -0.52
ATP2C1-201ENST00000328560 DEFA4P12838 97 aa11.81□□□□□ -0.52
ATP2C1-201ENST00000328560 TUBG1P23258 451 aa11.81□□□□□ -0.52
ATP2C1-201ENST00000328560 SSTR5P35346 364 aa11.81□□□□□ -0.52
ATP2C1-201ENST00000328560 ERVK11-1P61568 191 aa11.81□□□□□ -0.52
ATP2C1-201ENST00000328560 ADIRFQ15847 76 aa11.81□□□□□ -0.52
ATP2C1-201ENST00000328560 NECAP1Q8NC96 275 aa11.81□□□□□ -0.52
ATP2C1-201ENST00000328560 ZDHHC16Q969W1 377 aa11.81□□□□□ -0.52
ATP2C1-201ENST00000328560 WDR61Q9GZS3 305 aaKnown RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms